mRNA_L-elsbetiae_contig1409.3048.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 225 bits (574), Expect = 9.460e-62 Identity = 186/436 (42.66%), Postives = 237/436 (54.36%), Query Frame = 1 Query: 139 NELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV--DSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSGDIST-PLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLD-EYVNCRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLPPWRRR--RRGVLLAPLFRYS 1428 N+LH A G AE T A+L+ G++ I+Q + G TPLM A GHS +A++L+K+GAN S+A XXXXXXXXXXXX D L +G L++AA G + ++ LLR NANPLLI T+ G+ +T PLD AA +GH++VVRELIQ IE S G AL A H+DIMA+LT+AGVVDT L AG G EASVKFLL+ R E G++ Y+N RD +G T L G +PR+ R+L+DAGAD +S V+V + +G V+FN TPLAFT LR+K V + + AT+E + RL+AI RLLLRVDA AVSWLW S P + R A E L LMLP +RR RR L+A L RYS Sbjct: 107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGS-TALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRH-KEGGCGVEGAYLNARDVNGYTPLVVCTQG-------CFSQAPRIVRMLVDAGADTTSPVQVMNL-KGGVVFNDTPLAFTKLRLRKKIVADG-KPATKEHLQRLEAICRLLLRVDAVHAVSWLWPSGAPFIGR-ATETDPEPPLPA------LKLMLPILKRRTKRRCGLVATLLRYS 524
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.010e-59 Identity = 218/449 (48.55%), Postives = 274/449 (61.02%), Query Frame = 1 Query: 106 PRQQQSPRGPSNELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTR-SGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDE--YVNCRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLPPWRRRRRG--VLLAPLFRYSSHP 1437 PR QQ PRGPSN LH AA G E T +L+ G+ +I+Q + G+T LM A++ G++ + +++ +GA S+ XXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX + + G PLY AA+ G++DA + LL A A+PLL T SG PLDAAA GH EVV ELI+ I+ G SGG+ AL +A Q +++IM +LT+AGVVDT L+ AG G E +KFLL+Q A + +DE YVN RD G T L I PRV RLL++AGAD +S V V + G+ + + TPL T + +R K A+ EQ+H+L+AIRRLLLRV+A AVSWLW S + R AA R +T A T + L + RRR RG V LA L RYSS P Sbjct: 5 PRPQQRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQ---ARARKTMDEAAYVNTRDRGGVTPLLWGI----------QHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDV-SITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDISTITRAAA----RGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI) HSP 1 Score: 201 bits (510), Expect = 9.460e-54 Identity = 222/445 (49.89%), Postives = 266/445 (59.78%), Query Frame = 1 Query: 139 NELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVNCRDHHGCTALFCAIYGEPDRDGAPHPSS-PRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDAT---EEQMHRLKAIRRLLLRVDAARAVSWLWVS------REPPLVRCAAEVSGRAARKTAASGTQLALMLPPWRRRRR--GVLLAPLFRYSSHP 1437 N LH AA G E T LL+ GS +INQ +TPL+FAA GHS V IL+ +GAN S+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VD G PL+ A G L+A + LLRANANPL+ T PLD+AA G+ V+RELIQ IE G S G +AL AG+ V MA+LT AGVVDT L AG G+EASVK+LLQ P YVN RD +G T L +IY G SS PRVARLL++AGAD ++ +R T++ G VLF+ TPL T L+ KKV D T ++++ RL+ IRRLLL+V+A A SWLW S R P AAEV+ T A+ +L +LP RRR R GV+ L R+ P Sbjct: 2 NSLHDAAFKGSTERTAELLATGSWDINQGTVNNWTPLIFAASMGHSSVLGILLSKGANVSIVTDTGVTALHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVDIRTPVDGETPLFRAMTEGQLEATRELLRANANPLI--TRAPLPTLLPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA---YVNVRDRNGTTPLLSSIYV----CGVDEQSSFPRVARLLVEAGADTTTELRRTNSM-GVVLFSCTPLKLTVHILQDKKV-----DGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDN---AAEVTTA----TNAAAPKLGRVLPILRRRARRPGVVWTALCRHQRKP 424
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE) HSP 1 Score: 193 bits (490), Expect = 1.170e-50 Identity = 183/443 (41.31%), Postives = 240/443 (54.18%), Query Frame = 1 Query: 106 PRQQQSPRGPSNELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSG-DISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVNCRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLPPWRRRRRGVLLAPLFRYSS 1431 P QQ P GPSN L AA G + LL+ G+ +I+Q + G+TPLM A++ G+ + R+L+ +GA V XXXXXXXXXXXXXXXXXXXXXXXXXX + + G PLY AA+ G++ AV LL A A+PLL + SG + PLD AA GH EVV ELI+ I+ G SGG AL +A +DIMA+LTDAGVVDT L+ AG G EA +KFLL+Q + +S Y+N + G T+L I PRV +LL++AGAD +S V + + P GE F+ TPL T CL G + + T E+ ++L+ IRRLLLR +A AVSWLW S P + A+ +GR + A+ + LM+ R R+G LLA L RYSS Sbjct: 5 PLPQQWPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCTPLDCAAETGCAASVTALLKAGSNINTRRSDGATPLYTAAWNGNVVAVWLLLLAKADPLLTCASDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALFSRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRA-AYMNTLNGVGLTSLLDGI----------QRCRPRVVQLLVEAGADTTSPVLICNQP-GEDDFHITPLGLTM-CL---LGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKG-LLAALLRYSS 430
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 178 bits (452), Expect = 1.290e-45 Identity = 202/434 (46.54%), Postives = 246/434 (56.68%), Query Frame = 1 Query: 127 RGPSNELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVNCRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLP-PWRRR-RRGVLLAPLFR 1422 RGP NELH AA G ++ T +LL+ G I+I+Q DPRG+TPLMFAA+ GHS+V ++L+ RGA+ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PLL T SG+ PLD AA GH V REL+Q I S G+ ALG+A H+D+MA+L DAGVVDT N L++ G+E ++KFLL+Q+ E + RD G T L A+ P SPRV RLL+DAGADA+ VRV D + TPL CL K V + AT +Q+ L+A RRLLL+V+ A SWLW C A + A+ + +G L LP WRR RRG L +FR Sbjct: 9 RGPRNELHKAALDGSSQRTESLLAGGRIDIDQGDPRGWTPLMFAAEEGHSNVIKVLLNRGASL-LPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATVFLGRERALKFLLEQK--GEGTARTTYASTPRDGRGHTPLLSAV--------TTGPCSPRVVRLLVDAGADATLAVRVPDGFGRSTKY--TPLDCATRCLAEKVVDED--FATAQQLRNLRASRRLLLQVEVVHATSWLWGGH----AGCPAAPGKKRAQTESTNGKPLKSRLPIMWRRSARRGAALPGVFR 423
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI) HSP 1 Score: 177 bits (450), Expect = 2.900e-45 Identity = 221/449 (49.22%), Postives = 267/449 (59.47%), Query Frame = 1 Query: 106 PRQQQSPRGPSNELHHAARHGQAEHTLALLSM-GSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAG-VVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVN-CRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTD-TPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASG--TQLALMLPPWRRR--RRGVLLAPLFRYS 1428 PR QQ RGP N LH AA G E T A+LS G+ +I+ +P T LM A G++ V L+ +GAN S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLRA ANPLL + T G PL+ AA +G+ +V RE+I+ I G SGG+ AL +A H++ MA+L DAG VVDT LI A G+ +VKFLL++RQ + D YVN RD +G T + CA+ GA SP++ RLL+DAGA+ + V VT TP E TPLAFT LR +V + AT+EQ+ RLK R LL R +A AVSWLW S EPP + A+ +G +TA++ T L M P RR+ RGVLL LFRYS Sbjct: 2 PRPQQVTRGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-VLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLRRRQ-----ADADAYVNGTRDPYGRTPVMCAV-----DVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSE-TPLAFTTRLLREGRV--DGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRI---AQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYS 433
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI) HSP 1 Score: 173 bits (438), Expect = 1.380e-43 Identity = 208/436 (47.71%), Postives = 245/436 (56.19%), Query Frame = 1 Query: 124 PRGPSNELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVN-CRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLPPWRRR--RRGVLLAPLFR 1422 PRGP+N+LH AA HG A+ ALLS GS++INQ +P+G+TPLM A + GHS VA+ L+++GAN SVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+ +GHSEVVRELIQ + G S G+ +L A +VDIM +LT GVVDT L+ A +E SVKFLLQ + G YVN D G T L C I A SSPR+AR LID GAD S V VT + E TPL F LR+ KVG N ATEEQ+ LKAI RLL +++A AVSWLW S + P+ S R K +G L M R +RGV+L ++R Sbjct: 29 PRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQ-----------------------HGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQA-----GGGTWYVNNTLDPFGRTPLVCTIE-------ACGSSSPRIARFLIDDGADTKSTVLVTRSGEW-TTSRDTPLGFATRSLRQNKVGGKN--ATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHAVGAASSRM--KPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 170 bits (430), Expect = 1.060e-42 Identity = 163/380 (42.89%), Postives = 197/380 (51.84%), Query Frame = 1 Query: 124 PRGPSNELHHAARHGQAEHTLALL-SMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLRANANPLLITTTRSGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVN-CRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARA 1257 PRGP N+LH AA G E +ALL S SI I+ G+TPLM AA G S V RIL+ +GAN SV + XXXXXXXXXXXXXXXXXXXXXX XXXXXX RA ANPLL T SG PLD AA YG +EVVRELI+ I+ G SGG+ AL A + +VD+M++L DAGV+DT LI+ AG EA VK LLQQR + L YVN D G T L C+I D A SPRV RLL+DAGAD S V + T G++ + TP+ F L G + A E+ +H+L+AI RL +V+A R+ Sbjct: 12 PRGPQNDLHRAANDGSVERVVALLASRSSIAIDAGAEYGWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAGRNDEAGVKLLLQQRHGTSAGGELYMYVNDTHDLVGRTPLLCSI----DGGMAGFRCSPRVVRLLVDAGADTVSAVPLKGTA-GQIGRSVTPIDFATCSLHENMDGG--KTAMEKHVHKLRAIHRLFSQVEAERS 384
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 166 bits (419), Expect = 2.730e-41 Identity = 124/283 (43.82%), Postives = 160/283 (56.54%), Query Frame = 1 Query: 595 LRANANPLLITTTRSGDIS-TPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNI-LISVAGCGQEASVKFLLQQRQLAESPSGLDEYVN-CRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLPPWRRR--RRGVLLAPLFRYS 1428 L A ANPLL ++ S S PL+ AA G S VV EL++ I G SGGL AL A G VDIM+ML DAGVVD + + L++ G G+EA+V FLL+Q++ S YVN RD G TAL + G ++ P +PR+ R L+DAGAD +S V++ N TPL + ND R+ G++ AT+EQ+ RL+A RR+LLRV A AVSW+W S P L R A + R S TQL +LP RRR RR +L LFRYS Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQTS----YVNIARDDDGLTALLWSFRGNKNK-----PCNPRITRRLVDAGADTTSAVQLR-AKRSRTCVNVTPLEYVNDWALRETNGDH--PATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPA-----NSPRTAKHSPTQLTTVLPVLRRRAGRRALLWDTLFRYS 403
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Match: D7G1I8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I8_ECTSI) HSP 1 Score: 164 bits (416), Expect = 5.400e-41 Identity = 170/480 (35.42%), Postives = 213/480 (44.38%), Query Frame = 1 Query: 97 MIPPRQQQSPRGPSNELHHAARHGQAEHTLALLSMGSININQVDPRGFTPLMFAAQAGHSHVARILVKRGANASVASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSLLGNGGHPPLYLAAFYGHLDAVKALLR---------------------------------ANANPLLITTTRSGDISTPLDAAANYGHSEVVRELIQHDEIESWGRGSGGLIALGRAGQTGHVDIMAMLTDAGVVDTLNILISVAGCGQEASVKFLLQQRQLAESPSGLDEYVN-CRDHHGCTALFCAIYGEPDRDGAPHPSSPRVARLLIDAGADASSLVRVTDTPEGEVLFNGTPLAFTNDCLRRKKVGNNNRDATEEQMHRLKAIRRLLLRVDAARAVSWLWVSREPPLVRCAAEVSGRAARKTAASGTQLALMLPPWR-RRRRGVLLAPLFRYSS 1431 MI P Q++ PRGP NELH AA G + T A+LS G ININQ DP G+TPLM A+Q G++ + RILVK GAN + + XXXXXXXXXXXXXXXXX +++ G PL+LAA GH A A+PLLI S D PLDAAA G S VVRE + I+ G S G AL A + VD MA+L +AGVVDT LI +E S+KFLL+Q+QL +P+G YV+ RD G T L C+I E L+D + ++ RD TEEQ H+L A+ RLLLRV+A A SWLWVS P + A EV+ R T + + + M P RR LL+ + RYSS Sbjct: 1 MIMPAQEKWPRGPKNELHFAADTGSTQRTAAILSSGLININQGDPDGWTPLMVASQRGYTRIVRILVKEGANVLIVADLGFTAXXXXXXXXXXXXXXXXXNAGAD---------------------------------LEAATSTNGSRPLHLAADKGHXXXXXXXXXXXXNLNSRRFDRATXXXXXXXXXXXXXXXXXXXAKADPLLIRLNVSRDRFVPLDAAAGKGRSLVVREFLDQLGIDGCGGPSRGAHALYHAAKEQFVDTMAVLANAGVVDTGIALIGAIKENREGSIKFLLRQQQLQGNPTGA--YVDEARDPFGRTPLLCSIEDEG----------------LVDHYLGENRVI--------------------------------GRDITEEQAHKLNAVHRLLLRVEAVHAASWLWVSDAPDIAHTA-EVTKR----TKVTPSPRSRMFPVLGLSTRRNALLSAVLRYSS 392 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1409.3048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1409.3048.1 >prot_L-elsbetiae_contig1409.3048.1 ID=prot_L-elsbetiae_contig1409.3048.1|Name=mRNA_L-elsbetiae_contig1409.3048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=448bp MIPPRQQQSPRGPSNELHHAARHGQAEHTLALLSMGSININQVDPRGFTPback to top mRNA from alignment at L-elsbetiae_contig1409:3304..5971+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1409.3048.1 ID=mRNA_L-elsbetiae_contig1409.3048.1|Name=mRNA_L-elsbetiae_contig1409.3048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2668bp|location=Sequence derived from alignment at L-elsbetiae_contig1409:3304..5971+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1409:3304..5971+ >mRNA_L-elsbetiae_contig1409.3048.1 ID=mRNA_L-elsbetiae_contig1409.3048.1|Name=mRNA_L-elsbetiae_contig1409.3048.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2688bp|location=Sequence derived from alignment at L-elsbetiae_contig1409:3304..5971+ (Laminarionema elsbetiae ELsaHSoW15)back to top |