mRNA_L-elsbetiae_contig1408.3046.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A7S1ZWV4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZWV4_TRICV) HSP 1 Score: 138 bits (347), Expect = 2.470e-38 Identity = 65/120 (54.17%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 19 KQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 K WKK+A +PGRT VQCL + +VL PG+ +G W+PEED V+RLV HG KKWS IA+ + RL K+ RER+ NHLDPS+ +G WT +E+ +++E A LG+KW++I+KLL GR+ NA Sbjct: 6 KNWKKIASRLPGRTDVQCLHRWQKVLRPGLIKGPWTPEEDALVVRLVRQHGQKKWSFIARQLKGRLGKQCRERWYNHLDPSINRGEWTDEEDGIVIEAHARLGSKWAEIAKLLQGRTDNA 125
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A7S2RQP0_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RQP0_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.880e-36 Identity = 62/125 (49.60%), Postives = 90/125 (72.00%), Query Frame = 1 Query: 1 VVAHSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHGKKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 V+ H K WK +A VPGR VQCLQ + + LDP + +G W+P+ED +++ LVA + K W +AK +P R AK+ RERY NHLDPS+++GGWT +E+ +V+++ LG KW++ISK LPGR+ N+ Sbjct: 546 VIRHKEKNWKAIAEEVPGRNHVQCLQRWRKALDPAVVKGHWTPDEDTKLLLLVAENPKNWGHVAKGIPGRTAKQCRERYHNHLDPSIRKGGWTEEEDATIVKQQKLLGNKWAEISKFLPGRTENS 670
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A1Z5KL37_FISSO (Myb proto-oncogene protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL37_FISSO) HSP 1 Score: 135 bits (339), Expect = 1.400e-35 Identity = 62/123 (50.41%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 10 HSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 H K WKK+A C+PGR+ VQCL + +VL PG+ +G W+ EED+ V RLV +HG KKWS+IA+ + RL K+ RER+ NHLDP++ + WT E++ L+ ELG +W++I+K LPGR+ NA Sbjct: 211 HGGKNWKKIAGCLPGRSDVQCLHRWQKVLRPGLVKGPWTTEEDETVARLVHLHGTKKWSQIARQLNGRLGKQCRERWYNHLDPNINKSEWTEQEDQTLIMAHEELGNRWAEIAKRLPGRTDNA 333
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: I0YVS2_COCSC (Homeodomain-like protein (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVS2_COCSC) HSP 1 Score: 129 bits (323), Expect = 1.450e-35 Identity = 61/123 (49.59%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 10 HSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 + K WKK+A RT VQCL + +VL+P + +G W+PEED ++I LV G K+WS IAK +P R+ K+ RER+ NHLDP++K+G WT +E+ +LVEK AE G +W++I++ LPGR+ NA Sbjct: 29 YGAKNWKKIAEHFEDRTDVQCLHRWQKVLNPELVKGPWTPEEDLKIIELVTRLGAKRWSLIAKDLPGRIGKQCRERWHNHLDPTIKRGDWTKEEDSMLVEKHAEYGNQWAKIAQFLPGRTDNA 151
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A8N4F9T4_ELAGV (transcription factor MYB3R-5 isoform X7 n=2 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A8N4F9T4_ELAGV) HSP 1 Score: 131 bits (329), Expect = 1.630e-35 Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 19 KQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 K WKK+A PGR+ VQCL + +VL+P + +G+W+ EED +I+LVA HG KKWS IAK++P R+ K+ RER+ NHL+PS+K+ WT +EE L+ G KW++I+KLLPGR+ N+ Sbjct: 72 KNWKKIAELFPGRSDVQCLHRWQKVLNPELVKGTWTKEEDDRIIKLVAKHGCKKWSVIAKSLPGRIGKQCRERWHNHLNPSIKKDAWTPEEEVTLIHAHQIYGNKWAEIAKLLPGRTDNS 191
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: D7G7C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI) HSP 1 Score: 138 bits (348), Expect = 1.700e-35 Identity = 69/122 (56.56%), Postives = 86/122 (70.49%), Query Frame = 1 Query: 10 HSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHGKKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 HS K WK++A VPGRTAVQCLQHY VL PGI RGSW+P EDK+V+ LVA+HG K + R R+ + +LK+G WTA+EERVL+E+ AE+G KWSQISKL+PGRS N+ Sbjct: 22 HSLKHWKQIARSVPGRTAVQCLQHYKHVLHPGIERGSWTPAEDKQVMNLVAIHGTKV----------VQDRSRDAAASRKANTLKRGEWTAEEERVLLERYAEIGPKWSQISKLIPGRSYNS 133
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A2R5GXY0_9STRA (Transcription factor MYB3R-4 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GXY0_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.440e-35 Identity = 61/125 (48.80%), Postives = 88/125 (70.40%), Query Frame = 1 Query: 1 VVAHSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHGKKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 V H K WK +A VPGR+ VQCLQ + + LDP + +G W+PEED+ ++ L A + K W +A+ + R K+ RERY NHLDPS+K+G WT +E++++VEK+ ELG +W+ ISK LPGR+ N+ Sbjct: 405 VERHEKKNWKAIAAEVPGRSNVQCLQRWKKALDPRVVKGHWTPEEDQRLLMLAAQNPKNWGYVAREIEGRNPKQCRERYTNHLDPSIKKGSWTPEEDQIIVEKQQELGNRWAVISKFLPGRTENS 529
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A7S2VAB5_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VAB5_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.650e-35 Identity = 64/120 (53.33%), Postives = 89/120 (74.17%), Query Frame = 1 Query: 19 KQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 K WKK+A + GR+ VQCL + +VL PG+ +G W+PEED V+RLV VHG KKWS IA+ + RL K+ RER+ NHLDPS+ +G WT +E+++LV+ ELG +W++I+K LPGR+ NA Sbjct: 306 KNWKKIASRLKGRSDVQCLHRWQKVLRPGLIKGPWTPEEDATVVRLVKVHGTKKWSLIARQLNGRLGKQCRERWYNHLDPSINKGEWTQEEDKMLVDAHEELGNRWAEIAKRLPGRTDNA 425
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: A0A6I9S048_ELAGV (transcription factor MYB3R-5 isoform X6 n=1 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A6I9S048_ELAGV) HSP 1 Score: 131 bits (329), Expect = 1.030e-34 Identity = 61/120 (50.83%), Postives = 87/120 (72.50%), Query Frame = 1 Query: 19 KQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 K WKK+A PGR+ VQCL + +VL+P + +G+W+ EED +I+LVA HG KKWS IAK++P R+ K+ RER+ NHL+PS+K+ WT +EE L+ G KW++I+KLLPGR+ N+ Sbjct: 72 KNWKKIAELFPGRSDVQCLHRWQKVLNPELVKGTWTKEEDDRIIKLVAKHGCKKWSVIAKSLPGRIGKQCRERWHNHLNPSIKKDAWTPEEEVTLIHAHQIYGNKWAEIAKLLPGRTDNS 191
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Match: D2V9F0_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V9F0_NAEGR) HSP 1 Score: 124 bits (311), Expect = 5.330e-34 Identity = 57/126 (45.24%), Postives = 90/126 (71.43%), Query Frame = 1 Query: 1 VVAHSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIRLVAVHG-KKWSEIAKTMPRRLAKRIRERYINHLDPSLKQGGWTADEERVLVEKRAELGAKWSQISKLLPGRSLNA 375 V + K WKK+A + RT+VQCL + +VL+P + +G W+ EED ++++LV +G + WS IA +P R+ K+ RER+ NHLDPS+K+ WT +EE +L++ +++LG KW++ISKL+ GR+ NA Sbjct: 6 VQTYGGKNWKKIAETLQNRTSVQCLHRWQKVLNPNLVKGPWTKEEDDKILQLVKTYGPENWSMIASHLPGRIGKQCRERWYNHLDPSIKKEPWTEEEETLLLDAQSKLGNKWAEISKLIVGRTDNA 131 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1408.3046.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1408.3046.1 >prot_L-elsbetiae_contig1408.3046.1 ID=prot_L-elsbetiae_contig1408.3046.1|Name=mRNA_L-elsbetiae_contig1408.3046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=125bp VVAHSCKQWKKVAMCVPGRTAVQCLQHYSQVLDPGITRGSWSPEEDKEVIback to top mRNA from alignment at L-elsbetiae_contig1408:7053..9518+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1408.3046.1 ID=mRNA_L-elsbetiae_contig1408.3046.1|Name=mRNA_L-elsbetiae_contig1408.3046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2466bp|location=Sequence derived from alignment at L-elsbetiae_contig1408:7053..9518+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1408:7053..9518+ >mRNA_L-elsbetiae_contig1408.3046.1 ID=mRNA_L-elsbetiae_contig1408.3046.1|Name=mRNA_L-elsbetiae_contig1408.3046.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=750bp|location=Sequence derived from alignment at L-elsbetiae_contig1408:7053..9518+ (Laminarionema elsbetiae ELsaHSoW15)back to top |