prot_L-elsbetiae_contig14071.3042.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14071.3042.1
Unique Nameprot_L-elsbetiae_contig14071.3042.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length197
Homology
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BLAST of mRNA_L-elsbetiae_contig14071.3042.1 vs. uniprot
Match: D8LC55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC55_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 2.390e-55
Identity = 116/198 (58.59%), Postives = 140/198 (70.71%), Query Frame = 0 
Query:    1 GVSSRVEGVSSRMSLRAKDMLA-ISAGGXXXXXXXXXXXXASGTGSTIGNGPTSVFNSSSXXXXXXILSGIADDAAAAAAGPTPADKTEVSRLVSSLGSSPQLAEKVVAMSKLSTLLGDGAGRSSQDVLHSVAVPLVAVLHDAEHFDPFFANACIACAQQLLEAQGDAFAKELVEAGTARALIPLLHPRFELMRIEGL 197
            GVSSRVEGVSSRMSLRAKDML+ ++                S  G+   NG   +FN+ +      IL+GIAD+  A        D+ EVSRLV+S+ S+ QLAEK+VAM+KLS +LGD AG++SQ  L SVA  LVA+L DAE FDPFFANACIACAQQLLEAQG+AFA E+V AG A+ALIPLL P+FEL+RIEGL
Sbjct:   39 GVSSRVEGVSSRMSLRAKDMLSSVADDHDNNNVSSSPHSNGSAAGAARSNGTLGLFNNGNSSSASGILNGIADEVPAXXXXXXX-DEAEVSRLVASMDSTTQLAEKMVAMNKLSNVLGDDAGQASQMALCSVAEALVAMLRDAEFFDPFFANACIACAQQLLEAQGEAFAAEMVNAGAAQALIPLLDPKFELIRIEGL 235
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BLAST of mRNA_L-elsbetiae_contig14071.3042.1 vs. uniprot
Match: A0A6H5JB63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB63_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 8.840e-55
Identity = 118/198 (59.60%), Postives = 144/198 (72.73%), Query Frame = 0 
Query:    1 GVSSRVEGVSSRMSLRAKDMLA-ISAGGXXXXXXXXXXXXASGTGSTIGNGPTSVFNSSSXXXXXXILSGIADDAAAAAAGPTPADKTEVSRLVSSLGSSPQLAEKVVAMSKLSTLLGDGAGRSSQDVLHSVAVPLVAVLHDAEHFDPFFANACIACAQQLLEAQGDAFAKELVEAGTARALIPLLHPRFELMRIEGL 197
            GVSSRVEGVSSRMSLRAKDML+ ++                S +G+   NG   +FN+ S      IL+GIAD+  A  A     D+ EVSRLV+S+ S+ QLAEK+VAM+KLS +LGDGAG++SQ  L SVA  LVA+L DAE+FDPFFANACIACAQQLLEAQG+AFA E+V AG A+AL+PLL P+FEL+RIEGL
Sbjct:   39 GVSSRVEGVSSRMSLRAKDMLSSVADDHDNYNGSSSPHSNGSASGAARSNGTLGLFNNGSSSSASGILNGIADEVPAVPA----VDEAEVSRLVASMDSTTQLAEKMVAMNKLSNVLGDGAGQASQSALCSVAEVLVALLRDAEYFDPFFANACIACAQQLLEAQGEAFAAEMVNAGAAQALLPLLDPKFELIRIEGL 232
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14071.3042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC55_ECTSI2.390e-5558.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JB63_9PHAE8.840e-5559.60Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14071contigL-elsbetiae_contig14071:1280..4471 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14071.3042.1mRNA_L-elsbetiae_contig14071.3042.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14071 1280..4471 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14071.3042.1 ID=prot_L-elsbetiae_contig14071.3042.1|Name=mRNA_L-elsbetiae_contig14071.3042.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=197bp
GVSSRVEGVSSRMSLRAKDMLAISAGGDDSGGGGGGGGGASGTGSTIGNG
PTSVFNSSSNSSASGILSGIADDAAAAAAGPTPADKTEVSRLVSSLGSSP
QLAEKVVAMSKLSTLLGDGAGRSSQDVLHSVAVPLVAVLHDAEHFDPFFA
NACIACAQQLLEAQGDAFAKELVEAGTARALIPLLHPRFELMRIEGL
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