mRNA_L-elsbetiae_contig1407.3034.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: D8LJQ2_ECTSI (Sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ2_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 1.240e-145 Identity = 208/294 (70.75%), Postives = 227/294 (77.21%), Query Frame = 3 Query: 3 PDGVVKLKDKTIPVIEQ----------------------------------------EHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 P G VKLKDKT PVIEQ EH R+NVKM R AHD+WGISKIVLV+CDDFLKRVYTFPW+ +PEWK+ALQPVLDVLGIPEEKMVRC+LASMPPGCVIPVHHD GHWV+H+HRVHVA+VTDV+E VDF VGPDP+HM KVMFDEGRVVE NNQAKHAVTN WSR+ VHLILDYVDEY LDFV+L+PG+KLVQTRRSIDVEGL R+GP+PAF+VLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW Sbjct: 21 PSGQVKLKDKTTPVIEQVAKEQLDPEARPLVFTRGRADLSLLKLLLSSRGASIWTDEEHDRTNVKMTRPAHDKWGISKIVLVFCDDFLKRVYTFPWYHEPEWKEALQPVLDVLGIPEEKMVRCLLASMPPGCVIPVHHDTGHWVQHTHRVHVAVVTDVSE-----------VDFLVGPDPKHMRKVMFDEGRVVEFNNQAKHAVTNRWSRNRVHLILDYVDEYPLDFVRLAPGSKLVQTRRSIDVEGLVTRQGPDPAFVVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 303
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A6H5KXX9_9PHAE (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX9_9PHAE) HSP 1 Score: 409 bits (1050), Expect = 5.190e-140 Identity = 188/229 (82.10%), Postives = 205/229 (89.52%), Query Frame = 3 Query: 78 MKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 M R AHD+WGISKIVLV+CDDFLKRVYTFPW+ +PEWK+ALQPVLDVLGIPEEKMVRC+LASMPPGCVIPVHHD GHWV+H+HRVHVA+VTDV E VDFFVGPDP+HM KVMFDEGRVVELNNQAKHAVTN WSRD VHLILDYVDEY L+FV+L+PG+KL QTRRSIDVEGL R GP+PAF++LGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW Sbjct: 1 MARPAHDKWGISKIVLVFCDDFLKRVYTFPWYHEPEWKEALQPVLDVLGIPEEKMVRCLLASMPPGCVIPVHHDTGHWVQHTHRVHVAVVTDVRE-----------VDFFVGPDPKHMRKVMFDEGRVVELNNQAKHAVTNRWSRDRVHLILDYVDEYPLEFVRLAPGSKLAQTRRSIDVEGLVTRHGPDPAFVILGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 218
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A6G6CDK9_SACJA (Sulfotransferase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A0A6G6CDK9_SACJA) HSP 1 Score: 405 bits (1041), Expect = 6.380e-139 Identity = 197/294 (67.01%), Postives = 222/294 (75.51%), Query Frame = 3 Query: 3 PDGVVKLKDKTIPVIEQ----------------------------------------EHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 PDG+VKLKDK +PV+EQ EHARSNVK+ R AHDRWGI KIV VY DDFLK+VYTFPWF PEW+QALQPVLDVLGIPE K++RC+LASMPPGCVIPVHHD G WV+H+HR+HVA+ TDVAE VDFFVG D ++M KVM DEGRVVELNNQAKHAVTNGWSR+ VHLILDYV++Y LD V+LSPG KLVQTRRSIDV+G++KREGP+PAFI++GGQKCGTTLLYECLNQHPLVARG RRETHFFDW Sbjct: 20 PDGLVKLKDKRVPVVEQVAEDRLDPEARPMVFTRGRVDVSLLQHLLSSKGDAVWTDEEHARSNVKLTRPAHDRWGIGKIVFVYSDDFLKKVYTFPWFHDPEWRQALQPVLDVLGIPEGKVMRCLLASMPPGCVIPVHHDTGLWVQHTHRIHVAVTTDVAE-----------VDFFVGADVDNMRKVMMDEGRVVELNNQAKHAVTNGWSRNRVHLILDYVEDYPLDVVRLSPGTKLVQTRRSIDVKGVSKREGPDPAFIIIGGQKCGTTLLYECLNQHPLVARGGRRETHFFDW 302
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A835YZ41_9STRA (Sulfotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ41_9STRA) HSP 1 Score: 302 bits (773), Expect = 2.260e-96 Identity = 148/256 (57.81%), Postives = 177/256 (69.14%), Query Frame = 3 Query: 48 EQEHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGP-----------------NPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 E HAR NV++ R AHDRWG+ K VLVYCDDFLK VY FPW+++ W+ A+ PVL VLG+P E++VRC+LASMPPGC IPVHHD G+WVKH+HR+H+A+ T P KV F VGP + M V F EG V+ELNNQAKHAV N W R VHLILDYV+++ + +QL PGA+L QTRRSID+ L+ EG PAFIV+G QKCGTT +YE LNQHPLV R RRRETHFFDW Sbjct: 86 EAAHARDNVRITRPAHDRWGVRKAVLVYCDDFLKGVYGFPWWREERWRAAVAPVLRVLGVPRERVVRCLLASMPPGCDIPVHHDTGYWVKHTHRIHMAVHT-----------CPGKVRFRVGPTADAMRDVAFAEGEVIELNNQAKHAVRNDWDRHRVHLILDYVEDHPVRALQLPPGARLAQTRRSIDL--LSAAEGAXXXXXXXXXXXXXXXATGPAFIVIGAQKCGTTSMYEYLNQHPLVLRSRRRETHFFDW 328
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S3XTL4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTL4_HETAK) HSP 1 Score: 272 bits (696), Expect = 1.280e-85 Identity = 128/235 (54.47%), Postives = 160/235 (68.09%), Query Frame = 3 Query: 60 ARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 AR NV + R AHD WGI K+V V+CDD+LKRVY PWF +PEW+Q L P+ +G+ EK+VRC+LAS+PPG IP HHD GHWV+ +HRVHVA+ T V F GPD +M++V FDEGRVVELNNQ+KH V NGW + HLI DYV+++ L+ VQL PG L QTRR++D A P P+++++G QK GTT LYE L QH LV R RRRE H+FDW Sbjct: 17 ARHNVGLTRPAHDNWGIRKVVFVFCDDYLKRVYELPWFHRPEWRQHLDPIFQGIGLQPEKLVRCLLASIPPGVTIPPHHDTGHWVRFTHRVHVAVATH------------QDVVFRCGPDESNMARVSFDEGRVVELNNQSKHYVHNGWDQYRTHLIFDYVEDFPLERVQLQPGEALTQTRRTVDRAAEAGAR-PVPSYLIIGAQKAGTTSLYEHLCQHALVLRARRREAHYFDW 238
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S3HEI2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HEI2_9STRA) HSP 1 Score: 261 bits (666), Expect = 1.040e-80 Identity = 134/248 (54.03%), Postives = 165/248 (66.53%), Query Frame = 3 Query: 48 EQEHARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDL--VHLILDYVDEY-LLDFVQLSPGAKLVQTRRSIDVEG------LAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 E E+ NV++ R AHD WGI KIV +CDDFL +V FPW Q PEW++ L V +GI E K+VR +LAS+PPG IPVHHD G+WVKH+HR H+AIVT + F VGP PE M + FDEGR+VELNNQAKH VTNG S D VHLI DYVD++ + L PG K+ QTRRSID+E + +R+ P F+++G QKCGTT +YE L QHPLV RG+RRETH+FDW Sbjct: 77 EDENQMGNVRITRPAHDAWGIKKIVFNFCDDFLLKVLDFPWSQLPEWRELLSSVYAAMGIDESKVVRSLLASIPPGVTIPVHHDTGYWVKHTHRCHLAIVTH------------KDIVFKVGPTPELMKRYSFDEGRIVELNNQAKHFVTNG-SADTHRVHLIFDYVDDHPIKQRFLLQPGEKVYQTRRSIDLEREVQDAEVERRKAPT--FVIIGAQKCGTTSMYEYLCQHPLVVRGKRRETHYFDW 309
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: W7U713_9STRA (Sulfotransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U713_9STRA) HSP 1 Score: 258 bits (659), Expect = 4.840e-79 Identity = 127/250 (50.80%), Postives = 163/250 (65.20%), Query Frame = 3 Query: 18 KLKDKTIPVIEQEHA-RSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 KL D + ++E+A ++NV + R +HD WGI KIV +YCDDFL+R + PWF PEW+ L PV L + +VRC+LASMPPG IP HHD G+WV +SHR+H+ I TD P ++ F VGP + + + EG +VELNNQAKH+V N W R VHLILDY+++ ++ L PGAKL QTRRSID+E P P+F++LG QK GTT LYE L QHPLV R RRRETH+ DW Sbjct: 113 KLSDGGAKLWQEENAEKTNVGILRPSHDAWGIKKIVFIYCDDFLRRCFEMPWFHDPEWQALLLPVFQALNVAPRMVVRCLLASMPPGIAIPPHHDTGYWVHYSHRIHLPIETD-----------PARIVFRVGPSKDRLQRYDLPEGCLVELNNQAKHSVDNLWDRSRVHLILDYLEKDSIERSILPPGAKLHQTRRSIDLES-EHGSRPCPSFLILGAQKSGTTSLYEYLCQHPLVLRARRRETHYLDW 350
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A4D9D757_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D757_9STRA) HSP 1 Score: 255 bits (651), Expect = 4.290e-74 Identity = 127/252 (50.40%), Postives = 163/252 (64.68%), Query Frame = 3 Query: 18 KLKDKTIPVIEQEHA-RSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPGAKLVQTRRSIDVEGLAKREGPN--PAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 KL D + ++E+A ++NV + R +HD WGI KIV +YCDDFL+R + PWF PEW+ L PV L + +VRC+LASMPPG IP HHD G+WV +SHR+H+ I TD P ++ F VGP + + + EG +VELNNQAKH+V N W R VHLILDY+++ ++ L PGAKL QTRRSID+E G P+F++LG QK GTT LYE L QHPLV R RRRETH+ DW Sbjct: 444 KLSDGGAKLWQEENAEKTNVGILRPSHDAWGIKKIVFIYCDDFLRRCFEMPWFHDPEWQALLLPVFQALNVAPRMVVRCLLASMPPGIAIPPHHDTGYWVHYSHRIHLPIETD-----------PARIVFRVGPSKDRLQRYDLPEGCLVELNNQAKHSVDNLWDRSRVHLILDYLEKDSIERSILPPGAKLHQTRRSIDLES---EHGSRSCPSFLILGAQKSGTTSLYEYLCQHPLVLRARRRETHYLDW 681
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S1ZMC1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZMC1_TRICV) HSP 1 Score: 237 bits (604), Expect = 1.390e-73 Identity = 118/238 (49.58%), Postives = 156/238 (65.55%), Query Frame = 3 Query: 60 ARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQ-PEWKQALQPVLDVLGIPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHVAIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLL--DFVQLSPGAKLVQTRRSIDVEGLAKREGPNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 A++NV + R +HD WGI K+ L++CDDFL+ VY PW+ P + A++P+L+ LG+P ++VR +LAS+PPG IPVHHD G WV+H+HRVH ++ D P ++ F GP + M ++ G V E+NNQAKHAV+N R VHLILDYVDE + +LSPG KL+QTRRSID E + P F++LG QK GTT +Y+ LNQHPLV R RRRETH DW Sbjct: 81 AQNNVHVVRPSHDAWGIKKVCLIFCDDFLRDVYEMPWWHSNPAMRDAVRPILEALGVPPSRLVRLLLASLPPGVTIPVHHDTGEWVRHTHRVHCPVLVDD----------PERILFRCGPSEDAMDRIDCLPGHVFEMNNQAKHAVSNCSDRHRVHLILDYVDESFAVRNRHRLSPGEKLLQTRRSIDRE-IDAGARLAPTFLILGAQKAGTTSMYDYLNQHPLVVRARRRETHNLDW 307
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Match: A0A7S4J6G4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6G4_9STRA) HSP 1 Score: 232 bits (592), Expect = 8.790e-70 Identity = 124/244 (50.82%), Postives = 159/244 (65.16%), Query Frame = 3 Query: 60 ARSNVKMKRQAHDRWGISKIVLVYCDDFLKRVYTFPWFQQPE---WKQALQPVLDVLG-IPEEKMVRCMLASMPPGCVIPVHHDMGHWVKHSHRVHV-AIVTDVAEAQGSCC*LPPKVDFFVGPDPEHMSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLD--FVQLSPGAKLVQTRRSIDVEGLAKREG--PNPAFIVLGGQKCGTTLLYECLNQHPLVARGRRRETHFFDW 764 A++NV + R +HD WGI KI L++CDDFL+ VY PW+ ++A++P+L+ LG +P E++VR +LAS+PPG IPVHHD G WV+H+HRVHV IVTD P +V F GP + M +V + G V ELNNQ KHAV+N VHLILDYVDE V+L G +L+QTRRSID A+ EG P P++++LG QK GTT LYE L QHPLV R +RRETH DW Sbjct: 30 AQNNVHVTRPSHDAWGIKKIALIFCDDFLRDVYEMPWYHSKSSSAMREAVEPILEALGNVPRERIVRLILASLPPGITIPVHHDTGEWVRHTHRVHVPVIVTD-----------PSRVLFRCGPREDSMMRVECNPGHVFELNNQGKHAVSNCSDEHRVHLILDYVDESFPSPRRVKLERGERLLQTRRSID---RARDEGSRPCPSYLILGAQKAGTTSLYEYLTQHPLVVRAKRRETHNLDW 259 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1407.3034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1407.3034.1 >prot_L-elsbetiae_contig1407.3034.1 ID=prot_L-elsbetiae_contig1407.3034.1|Name=mRNA_L-elsbetiae_contig1407.3034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=112bp MSKVMFDEGRVVELNNQAKHAVTNGWSRDLVHLILDYVDEYLLDFVQLSPback to top mRNA from alignment at L-elsbetiae_contig1407:10452..13472- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1407.3034.1 ID=mRNA_L-elsbetiae_contig1407.3034.1|Name=mRNA_L-elsbetiae_contig1407.3034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3021bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:10452..13472- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1407:10452..13472- >mRNA_L-elsbetiae_contig1407.3034.1 ID=mRNA_L-elsbetiae_contig1407.3034.1|Name=mRNA_L-elsbetiae_contig1407.3034.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=672bp|location=Sequence derived from alignment at L-elsbetiae_contig1407:10452..13472- (Laminarionema elsbetiae ELsaHSoW15)back to top |