mRNA_L-elsbetiae_contig1406.3030.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: A0A6H5L1P6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1P6_9PHAE) HSP 1 Score: 1102 bits (2851), Expect = 0.000e+0 Identity = 766/1583 (48.39%), Postives = 923/1583 (58.31%), Query Frame = 1 Query: 10 NMSMADANMSRL-DVQQELDAIKAERRHRQQALYD-----IHPPVSTVWPSPPLSRLPAAVRAVMCSNMFGR--EGNRRLQPYRPEISVPHQLLTMAYVPRPDGILFPCPSHFMGSLVKSLDLSPWDFSSTEATESLWQINRQIKAIQISGRGFELDQQDSLGALFHIGPQLTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGD----NHAAEVGRGCPSVTSVDLSSCMGLTDQGLAAIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLDRCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVSGCVSTKPEGXXXXXXXXXXXFRLGFAGCKGLGRSTALAFVAERCGSCLRHLNISDNPAMAAADVGRLLRSCGRLESVDLSGLTKLDRSSFRGLGG------------------GRRHTPANGRTTAPAQNPRSNQTFSADGIGGSGGEKDGIPXXXXXRVVRMLRLPSLDDASLVLLADACPGLEELLVSDSRRVTGACLTPLAILCPFLRSLGLDRCSAASDEASLADTCRRLPGLENLGLGVALEGR----TGSSHTCN-GHGG---RSRGSDGQQSDSHASSRRAPYGGILDVSFSSSS---SSVTGGRSHDTDGGHQPFTGETLLAAASSSCAQLQTLGLEGHNHVSVSSGQCPPVAFPCLTELRLAGCAGVDDAGLLVLLEACPRVRSLSLAGSGVSQDGLARSVAS---LNLPFVELLPPLLIPSPVKAGESGSTASSSPSRRARTIATRLGRNPPGQQQALMEGQRALDIVMPRSVPQPQPLLQRKHHLDTAASISSMQTMRSGTAGGASTGSTTATDFQFSGKSTGGSSKGAVVGERAMATGLRPAMHHQLHLAAAALLSRFDQEQRALETLGRALRHFRDKRTGILMASARAICRGMLAYRFRTNDGQPDKVRLMLAKKAASKVQKLVRAHHARKRDADAAKFQALWRRYTARCMFIHHLRLRHAAIGFQLLWRGYYVRTRYRVRQKVQELKRAKKMLGKQWFKQGATL-RHAEWDPAKRAAEQRHCEEIRVGIQQCASFVRVESQRLKALASVKAQKNLEDEEAVTFGAMPPAPFRKIVRGF------------------------------FDVHPKAKRLRDGREVPFDGEANLAPPPEGK--------HALSLSKSGKLANITVFGSASTVKDPDDFDVFRKGPGEIWEGDEEGAAGAKVAADRVWEAVQVAESGYDKKRSLCGHCKGRFASISCE------------ECRRGYCLRCSGSVHSQPDRLGHDLGPFQRPDKSTKASDRGVDGGSGKKRDAKKAKQAARSLPGCARRAEGFLKTMKLLKHKEKVNADEQRVKLKAKDRREMEEAEERARKQNEQYNLASAGDKNAATLVQKTCQGYMRKLQLRRESELRRRAQTEGAKLKTKESATRIQALYRGHSVRVSLKEPTDKSAEKQALGAGPTSATLAATTGGGI-VALPGSGSIQRRKAAAAERARRDCAFRRRWERETAIADMKHLEEEATRTFVSDVRWAVGKH 4470 +MS+AD +++ L DVQ+ELD+IKAERR R +ALYD + + + R PAA RAV+ +N R EG + PY+PE P QLLTMAYVPR DG L P P HFMGS V++LDLSP ++ +++SGR F DQ++ L AL +G +LT LE++ CSG++ A G LL+GVGRQLV+L+LSGCLDMGD +H A +G+ Q L + G L+RLLVS CPGVGD GLRAVLD CL LQELSAG C+ VTGRAFLG IFAGGVATAPVRGLK L+LP C +L SA+EWIAAGC+DLRSL XXXXXXXXXXX GLG STAL+FVA+R G L+HL+ISD PA AA+ VG+ LR+CG+LE VDLSGL K+D SSFRGLGG GR+ + R+ NP Q+ G G G P R RMLRLP LD+AS+V A+ACP L+ELL+SDSR VTGACL PLA LCP LRSLGLDRCSAASDE +LAD CRRLPGLE+L + + R T + H N GH G R+ GQ + HA SRRAPYGG+LD S SSSS SS G R+ + FTG LL AA C +L TLGLEGH ++ SS P AFPCLTELRL GC V+D GL+ LL+ACPRVRSLSL GSGV+QD L + AS ++ F E+LPP+ S + G+S TA+SS RR RT A G +A + P P L T S +SMQ S GG+ T S+ + + G+ GGS A+ATGLRPA HH+LHLAAAA++SRFD+E+RALE LGRALR FRD+R +LM+SAR ICR MLAYRF++N GQ DK +QELK AKK +GKQWFK A R A+ DP K AE+R EEIRVG++QCASFVR E +RL A+A ++ Q LEDE+ V FGAMPPAP RKI G FD+HPKA RLRDGRE+PFDGEA+ PP + A + + S ++ IT F + VKDP DFDVFRKG E+W+ DE+GAA K AADR EA++ A SG +K+R LC HC+ RFAS+SC E R RCS VHSQP RLGHDL PFQRP+K S+R +DGG GK+ AK AK+AARSLP CARRAE LK+M LLKHKE + ADE RVK+KAKDR+EMEEA+ERAR+ C+G MRKL ++RESELRRRAQ E +KLK KE+ATR+QALYRG SVR LKE A G T A LA G+ LPG + R K AAA RARRDCAFRRRWERE AI+ M HLEEE+TR + + VG H Sbjct: 3 SMSIADPDVTSLEDVQRELDSIKAERRRRHRALYDGTLAGASRETTKMTATSSKVRFPAAARAVIWANALHRKEEGEEGMLPYKPEACAPFQLLTMAYVPRSDGRLGPSPGHFMGSPVEALDLSPC-----------------LRTLKLSGRNFGPDQEEVLQALSRVGEKLTSLEITNCSGVTPDAHGILLRGVGRQLVTLDLSGCLDMGDGLVVHHRAFLGK------------------QFLVEV--EGGLPCLQRLLVSDCPGVGDLGLRAVLDGCLALQELSAGGCDLVTGRAFLGGIFAGGVATAPVRGLKLLELPGCQQLHPSALEWIAAGCSDLRSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGGSTALSFVADRSGQYLQHLDISDIPATAASVVGKFLRNCGKLEFVDLSGLVKVDESSFRGLGGXXXXXXXXDGDTSVADPRGRKDQTKHNRSANIGVNPAREQS-------GKGSMPSGAPALPHLRAARMLRLPGLDNASVVRFANACPSLKELLMSDSRMVTGACLAPLASLCPLLRSLGLDRCSAASDEPALADACRRLPGLESLAVAMGDGNRSRFMTDADHPGNSGHAGGGDRTCRIGGQHNTPHAPSRRAPYGGLLDCSDSSSSAVSSSAAGTRTMQDS--NLAFTGSLLLEAAWRHCPRLTTLGLEGHEQLNFSSEHSPAEAFPCLTELRLVGCTAVNDTGLVALLKACPRVRSLSLVGSGVTQDALVKHSASSVMVSQSFAEVLPPVPFSSALAGGDSRFTATSS--RRTRT--------------AESTGSQAQFVTAP---PTXXXXXXGHRQLQTMESSTSMQ-QASYLTGGSCTSSSQSK--RRVGQENGGS---------ALATGLRPAPHHKLHLAAAAVVSRFDEERRALEILGRALRQFRDRRARVLMSSARKICRRMLAYRFKSNTGQLDK----------------------------------------------------------------------------IQELKLAKKAIGKQWFKAAAAAARDADKDPDKITAEKRRREEIRVGVEQCASFVRGERRRLGAVAMLRNQAILEDEQVVHFGAMPPAPTRKIAPGVYYFRQLHWFHVLATPQCRTLFFSKYKEEGPFDIHPKATRLRDGREIPFDGEADFLRPPPAQAKGSPPSLSATTTTSSREVERITAFTGDTAVKDPPDFDVFRKGSSELWDEDEDGAAAEKAAADRASEAMRAAASGSNKERILCFHCRKRFASVSCTXXXXXXXXXXXXESRLSLNDRCSTHVHSQPGRLGHDLVPFQRPEKPINTSERRLDGG-GKRGHAKNAKRAARSLPDCARRAESCLKSMALLKHKEMIRADENRVKMKAKDRKEMEEAQERARRXXXXXXXXXXXXXXXXXXXXXXCKGLMRKLLIKRESELRRRAQEEDSKLKLKETATRVQALYRGFSVRHFLKE--------SAASVGETYAGLAVVLPEGVRPILPG---MSRDKTAAAARARRDCAFRRRWEREAAISKMIHLEEESTRYGIKNNTLFVGLH 1420
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: D8LL54_ECTSI (B box-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL54_ECTSI) HSP 1 Score: 859 bits (2220), Expect = 8.000e-289 Identity = 500/795 (62.89%), Postives = 576/795 (72.45%), Query Frame = 1 Query: 3289 GFFDVHPKAKRLRDGREVPFDGEANLAPPPEGK---HALSLSKSGKLA-----NITVFGSASTVKDPDDFDVFRKGPGEIWEGDEEGAAGAKVAADRVWEAVQVAESGYDKKRSLCGHCKGRFASISCEECRRGYCLRCSGSVHSQPDRLGHDLGPFQRPDKSTKASDRGVDGGSGKKRDAKKAKQAARSLPGCARRAEGFLKTMKLLKHKEKVNADEQRVKLKAKDRREMEEAEERARKQNEQYNLASAGDKNAATLVQKTCQGYMRKLQLRRESELRRRAQTEGAKLKTKESATRIQALYRGHSVRVSLKEPTDKSAEKQALGAGPTSATLAATTGGGI-VALPGSGSIQRRKAAAAERARRDCAFRRRWERETAIADMKHLEEEATRTFVSDVRWAVGKHEALQARSSLVKSRRASARSAWNRLQARQN*KSLLDPALPEKDPQRESLEKEIELQDIRILHQTNLFEVAEKGLYWTRAFIRQHYRRRAAQVASQAGAAHTFAWLEEELYALDHVVDFASKRLEGAADVLEQEFFRGWLMDQVARAGKQRLMIDLEQESLLETETARLSREKVHAFKTRTNLDELINAYHIDTQLGAERLGAELASAVAEEGTDEKFTCVSKITSLKNKEESVRRKVQVSLQRGLEEEIAAEDRYLNDETSGFTFAGDVADAPITHFAKIKASLMEPPHHPAHLSFDSWRKVYRAQPWLAAQTQAENKRKLARASTIQTLEEMRAVTAAARSQEAFAAKEVVALKAEIEDFEKRLAFSRSGVAGDATQEPLSNDDRIRMEIAL 5646 G FD+HPKAKRLRDGREVPFDGEA+ PP + + SLS + K + +T F + VKDP DFDVFRKGPGE+W DEEGAA AKVAADR EA++ A SG K+R LC HCK RFAS+SC ECR GYC RCS VHSQP RLGHDL PFQRP+K+T AS+RG+DGG GK+ DAKKAK+AARSLP CARRAE LK+M LLKHKE + ADE RVK+KAKDR+EMEEA+ER R+ VQ C+G MRKL L+RES++RRRAQ E +KLK KE+ TR+QALYRG SVR LKE A G T+A LAA G+ LPG + R K AAA RARRDC FRRRWERE AI+ M HLEEE+TRTF SDVRWAV H L+ +S+L+K+RR +ARSAW RLQ KS+LDPALP DP+R L KEIELQD RILHQT++FE+ EKGLYWTRAFIRQHYRR AA +AS+AG WL DQ++RAGKQRLMIDLEQE+LLE+ETARL +E HA K R NL EL+ AYHID QLGAER+GAELA+ +EEGTDE+F +++T LKNKE+SVR KVQ SLQRGLEEEIA+EDRYL +E T GDVADAPI HFAKIKASL+EPP HPAH+SF+SWRKVYRAQPWLAAQTQAENKRK ARASTI LEEMRAV AAA+SQEAFAAKEV +LKAEIE F+KRLAF RSG A QEPLS+D+RIRME+ + Sbjct: 4 GPFDIHPKAKRLRDGREVPFDGEADFVRPPPAQAKGSSPSLSATTKTSLREVERVTAFKGDTAVKDPPDFDVFRKGPGELWGEDEEGAAAAKVAADRASEAMRAAGSGSSKERILCFHCKKRFASVSCTECRSGYCHRCSTHVHSQPGRLGHDLVPFQRPEKTTNASERGLDGG-GKRGDAKKAKRAARSLPDCARRAESCLKSMALLKHKEMIRADENRVKMKAKDRKEMEEAQERDRRXXXXXXXXXXXXXXXXXXVQNACKGLMRKLLLKRESDIRRRAQEEDSKLKLKETVTRVQALYRGFSVRHFLKE--------SAASVGETNAGLAAVLPEGVRPILPG---MSRDKTAAAARARRDCTFRRRWEREAAISKMIHLEEESTRTFASDVRWAVENHTMLRVKSNLLKTRRGAARSAWTRLQEE---KSVLDPALPPDDPERTRLAKEIELQDTRILHQTSMFEIVEKGLYWTRAFIRQHYRRHAAHLASKAG----------------------------------------WLSDQISRAGKQRLMIDLEQENLLESETARLLKENEHASKCRENLQELLKAYHIDAQLGAERVGAELANTASEEGTDERFLWTTRVTRLKNKEQSVRGKVQASLQRGLEEEIASEDRYLTEEV---TITGDVADAPIAHFAKIKASLVEPPRHPAHMSFESWRKVYRAQPWLAAQTQAENKRKAARASTIDGLEEMRAVVAAAKSQEAFAAKEVASLKAEIEAFQKRLAFKRSGAPEGAAQEPLSDDERIRMEVRV 740
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: D8LL53_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL53_ECTSI) HSP 1 Score: 863 bits (2231), Expect = 3.360e-287 Identity = 551/1000 (55.10%), Postives = 658/1000 (65.80%), Query Frame = 1 Query: 10 NMSMADANMSRL-DVQQELDAIKAERRHRQQALYDIH----PPVSTVWPSPPLS-RLPAAVRAVMCSNMFGRE--GNRRLQPYRPEISVPHQLLTMAYVPRPDGILFPCPSHFMGSLVKSLDLSPWDFSSTEATESLWQINRQIKAIQISGRGFELDQQDSLGALFHIGPQLTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTDQGLAAIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLDRCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVSGCVSTKPEGXXXXXXXXXXXFRLGFAGCKGLGRSTALAFVAERCGSCLRHLNISDNPAMAAADVGRLLRSCGRLESVDLSGLTKLDRSSFRGLGGGR-RHTPANGRTTAPAQNPRSNQTFS----------ADGIGGSGGEKDGIPXXXXXRVVRMLRLPSLDDASLVLLADACPGLEELLVSDSRRVTGACLTPLAILCPFLRSLGLDRCSAASDEASLADTCRRLPGLENLGLGVALEGR----TGSSHTCN-GH---GGRSRGSDGQQSDSHASSRRAPYGGILDVSFSSS----SSSVTGGRSHDTDGGHQPFTGETLLAAASSSCAQLQTLGLEGHNHVSVSSGQCPPVAFPCLTELRLAGCAGVDDAGLLVLLEACPRVRSLSLAGSGVSQDGLARSVAS---LNLPFVELLPPLLIPSPVKAGESGSTASSSPSRRARTIATRLGRNPPGQQQALMEGQRALDIVMPRSVPQPQPLLQRKHHLDTAASISSMQTMRSGTAGGASTGSTTATDFQFSGKSTGGSSKGAVVGERAMATGLRPAMHHQLHLAAAALLSRFDQEQRALETLGRALRHFRDKRTGILMASARAICRGMLAYRFRTNDGQPDKVRLMLAKKAASKVQKLVRAHHARKRDADAAKFQALWRRYTAR 2907 +MS+AD +++ L DVQ+ELDAIKAERR RQ+ALYD V+T P+ R PAA R V+ +N R+ G + PY PE P QLLTMAYVP DG L P P HFMGS V++LDLSPWD S ++LW+ NR ++ +++SGR +Q++ L AL +G QLT LE++ CSG++ ALG LL GVGRQLV+L+LSGCLDMGD+H AEV RGCP++ S GLTDQGL+A DG S L+RLLVS CPGVGD GLRAVLD C LQELSAG C+ VTGR FLGE+FAGGVATAPVRGLK L+LP+C +L SA+EWIAAGC+DLRSLVV XXXXXXXXXXX GLG STAL+FVA+R G L+HL+ISD PA AA+ VG+ LR+CG+LE VDLSGL K+D SSF GLGGG + +G T+ R++Q A + G G P R RMLRLP LD+AS+V A+ACP LEELL+SDSR VTGACL PLA LCP LRSLGLDRCSAASDE +LAD CRRLPGLE L + + R T + H N GH GGRS GS GQ + HA SRRAPYGG+LD S SSS SSS G R+ G + FTG LL AAS C +L TLGLEGH ++ SS P AFPCLTELRL GC V+D GL+ LL+ACPRVRSLSL GSGV+QD L + AS ++ E+LPP+ S + G+S TA+SS RR RT A G A + P P P P Q L T S +SMQ S AGG+ T S+ + G+ GGS A+A GLRPA HH+LHLAAAA++SRFD+EQRALETLGRALRHFRD+R LM+SAR ICR MLAYRF++N G+PDK+RL LAKKAA +Q LVR HH+RKRDA AAK Q+LWRRYTAR Sbjct: 3 SMSIADPDVTSLEDVQRELDAIKAERRRRQRALYDGTLAGASRVTTKMPATSSKVRFPAAARTVIWANALHRKEKGEEGMLPYEPEACAPFQLLTMAYVPWSDGRLGPSPGHFMGSPVEALDLSPWDISFAGQIDALWRANRCLRTLKLSGRNLGPNQEEVLQALSRVGEQLTSLEITNCSGVTPGALGILLHGVGRQLVTLDLSGCLDMGDDHVAEVTRGCPALLSXXXXXXXGLTDQGLSAATSKDGLSCLKRLLVSDCPGVGDLGLRAVLDGCAALQELSAGGCDRVTGRVFLGEMFAGGVATAPVRGLKLLELPDCQQLHPSALEWIAAGCSDLRSLVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGLGGSTALSFVADRSGRYLQHLDISDIPATAASVVGKFLRNCGKLEFVDLSGLVKVDESSFHGLGGGGGKSVDGDGDTSVADPRGRTDQAKHNSSAEMGINPARELNGKGSMTSEAPALPHLRAARMLRLPGLDNASVVRFANACPSLEELLLSDSRMVTGACLAPLASLCPLLRSLGLDRCSAASDEPALADACRRLPGLERLAVAMGDGNRSRFMTDADHPGNSGHARGGGRSGGSSGQHNTPHAPSRRAPYGGLLDCSVSSSTVFSSSSAAGTRT--MRGSNLAFTGGVLLEAASRHCPRLTTLGLEGHEQLNFSSEHSPAEAFPCLTELRLVGCTAVNDTGLVALLKACPRVRSLSLIGSGVTQDALVKHSASSVMVSQSIAEVLPPVPFSSALADGDSRFTATSS--RRTRT--------------AESTGSPAQFVTAP---PTPPPPKQGYRQLQTMESSTSMQ-QASDLAGGSCTSSSQSKHRV--GQENGGS---------ALAAGLRPAPHHKLHLAAAAVVSRFDEEQRALETLGRALRHFRDRRARALMSSARKICRRMLAYRFKSNTGRPDKMRLELAKKAAKSIQGLVREHHSRKRDAHAAKIQSLWRRYTAR 969
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: A0A6H5L2U6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U6_9PHAE) HSP 1 Score: 234 bits (598), Expect = 1.150e-64 Identity = 132/171 (77.19%), Postives = 147/171 (85.96%), Query Frame = 1 Query: 5245 TSGFTFAGDVADAPITHFAKIKASLMEPPHHPAHLSFDSWRKVYRAQPWLAAQTQAENKRKLARASTIQTLEEMRAVTAAARSQEAFAAKEVVALKAEIEDFEKRLAFSRSGVAGDATQEPLSNDDRIRMEIALAKDRDKLVDQEERLERRRKANGNKQKELKKMEEELEA 5757 T T GDVADAPI HFAKIKASL+EPP HPAH+SF+SWRKVYRAQPWLAAQTQAENKRK ARASTI+ LEEMRAV AAA+SQEAFAAKEV +LKAE+E F+KRLAF RSG DA QEPLS+DDRIRMEI LAK ++KL D+EERLERRRKAN +K +ELKK E +LEA Sbjct: 5 TEEVTITGDVADAPIAHFAKIKASLVEPPRHPAHMSFESWRKVYRAQPWLAAQTQAENKRKAARASTIEGLEEMRAVVAAAKSQEAFAAKEVASLKAEMEAFQKRLAFKRSGAPEDAAQEPLSDDDRIRMEIDLAKTKEKLEDREERLERRRKANSHKNEELKKKEADLEA 175
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: L8HJY6_ACACA (Leucine rich repeat domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJY6_ACACA) HSP 1 Score: 93.6 bits (231), Expect = 6.950e-16 Identity = 78/295 (26.44%), Postives = 135/295 (45.76%), Query Frame = 1 Query: 481 FHIGPQ--LTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTDQGLAAIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLDRCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRG---LKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVSGCVSTKPEGXXXXXXXXXXXFRLGFAGCKGLGRSTALAFVAERC-------GSC------------------LRHLNISDNPAMAAADVGRLLRSCGRLESVDLSGLTKLD 1275 F I P LT L+LS+C L+ + + RQLVSLN++GC+ + + + CP + + LS C +TD G+A ++ + H+ L RL ++ C V DN L ++ ++C +++ L G C+ +T + E+ + T P L+ + L C L A++ + + + LR L +SGC T L C L T + +A+RC GSC L+ L+++ + A+ A +G + C R+ES++++G D Sbjct: 55 FFIEPSDHLTSLDLSQCRTLNENHFELMATKL-RQLVSLNVAGCVSVTYDVLQRITESCPHIRQLTLSGCPKVTDSGVA-LVATTYHTNLTRLELNECFEVTDNSLASLSEQCTNIKALHLGYCQYITDKGT--EMLCRALPTNPKMSYIHLEEITLDYCTELTDKAIQQLVSFNSTLRYLSMSGCKITD-NAIRYVAGYCARLVTLNVKECDMLTDYT-ITVIAQRCKGLEAFDGSCGGRYTDASAQQLALYSHQLKSLSLARSAAITNASLGSIALGCSRIESLNINGTQVSD 343
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: UPI001651C599 (F-box/LRR-repeat protein 4 n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI001651C599) HSP 1 Score: 69.7 bits (169), Expect = 3.990e-8 Identity = 75/276 (27.17%), Postives = 114/276 (41.30%), Query Frame = 1 Query: 442 GFELDQQDSLGALFHIGPQLTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTDQGLAAIIPSDGHSLLRRLLVSG--CPGVGDNGLRAVLDRCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVSGCVSTKPEGXXXXXXXXXXXFRLGFAGCKGLGRSTALAFVAERCGSC-LRHLNISDNPAMAAADVGRLLRSCGRLESVDLSG 1260 G +L ++SL LF QL +L+L CS L++ L + + L SL+L G + + E P V + L L+D LA I+ GH L + +SG + D GL +V C +L+ L + +TG + L IFA A ++ L N +D S ++ + C +L L +SG E ++ GCK A V G C L+ L +S + + L SC LE V L+G Sbjct: 224 GAKLVGKESLIKLFQACTQLLELDLGYCSRLAAAPENEALWTLPQSLTSLSLCGMMMPDEKILVECITRLPHVRKLKLCGVPALSDSSLAQIVEKIGHQLTS-VNLSGVYAQEISDEGLESVAKYCTNLEALHISLLKNITGIS-LRPIFADAQRAAKIKTL----CINSRLMDISVLDQVMCSCPNLDVLDMSGLACVTNEMLISLADHSPNLTQIYLKGCK----QVTDAGVCYLSGICPLKCLGLSGIHTLTDKSIFCLASSCPHLEEVYLNG 489
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: A0A2P4X8S1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8S1_9STRA) HSP 1 Score: 63.2 bits (152), Expect = 6.540e-6 Identity = 51/182 (28.02%), Postives = 86/182 (47.25%), Query Frame = 1 Query: 499 LTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTD---QGLAAIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLD---RCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGC-TDLRSLVVSGC 1023 LT L++SRC L+ + L ++ + + L L+++ C +V + C + ++ + C G+TD Q LA+ S LR L + C + +G+ + + + + +Q L+ C V AF G F V +R L L L N +D++A+ WI GC L+ L VS C Sbjct: 103 LTSLDVSRCRALTDEGLNSIRRHL-NLLQELHINECHHFSSTVLTKVWKDCKRLHTLSVRGCPGVTDAVLQCLASTKRSSADCTLRSLDIRQCKNLTSSGISYLANSSVKNMSMQHLAVDDCLSVDNMAFFG--FESSVV---LRSLTSLSL-NGLGIDETAISWIVKGCGASLQKLNVSRC 277
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: UPI00103633D9 (F-box/LRR-repeat protein 2-like n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103633D9) HSP 1 Score: 61.2 bits (147), Expect = 1.140e-5 Identity = 47/179 (26.26%), Postives = 85/179 (47.49%), Query Frame = 1 Query: 493 PQLTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTDQGLAAIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLDRCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVSGCVS 1029 P L D+++ R + +++ +++SLNL+ ++ D ++ CP+V +D+SSC+G+T++G+A + D S +R L ++ C G+ + G L + LQ +G +E G A +G L DL C K + I C LR + ++GCV+ Sbjct: 164 PFLKDIDMERANLGGGDGTADIVKN--SRIMSLNLAYNSNLSDECLRKLASICPNVELLDVSSCLGITEKGVAEFLKGD--SKIRHLHINDCLGIKNIGTGFELPKLEVLQAARSGIDDE--GLAIIGNRCCR---------LLNFDLEGCVGATKVGLMEIFTNCKILREINLNGCVN 327
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: A0A4V3WIR8_CAMSI (F-box domain-containing protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4V3WIR8_CAMSI) HSP 1 Score: 61.2 bits (147), Expect = 1.820e-5 Identity = 47/179 (26.26%), Postives = 85/179 (47.49%), Query Frame = 1 Query: 493 PQLTDLELSRCSGLSSKALGALLQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTDQGLAAIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLDRCLDLQELSAGSCEEVTGRAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVSGCVS 1029 P L D+++ R + +++ +++SLNL+ ++ D ++ CP+V +D+SSC+G+T++G+A + D S +R L ++ C G+ + G L + LQ +G +E G A +G L DL C K + I C LR + ++GCV+ Sbjct: 371 PFLKDIDMERANLGGGDGTADIVKN--SRIMSLNLAYNSNLSDECLRKLASICPNVELLDVSSCLGITEKGVAEFLKGD--SKIRHLHINDCLGIKNIGTGFELPKLEVLQAARSGIDDE--GLAIIGNRCCR---------LLNFDLEGCVGATKVGLMEIFTNCKILREINLNGCVN 534
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Match: UPI0005C9DC0A (F-box/LRR-repeat protein 2-like n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005C9DC0A) HSP 1 Score: 57.0 bits (136), Expect = 9.580e-5 Identity = 57/210 (27.14%), Postives = 88/210 (41.90%), Query Frame = 1 Query: 466 SLGALFHIGPQLTDLELSRCSGLSSKALGAL-LQGVGRQLVSLNLSGCLDMGDNHAAEVGRGCPSVTSVDLSSCMGLTDQGLA----------------------AIIPSDGHSLLRRLLVSGCPGVGDNGLRAVLDRCLDLQELSAGSCEEVTG---RAFLGEIFAGGVATAPVRGLKRLDLPNCPRLDKSAVEWIAAGCTDLRSLVVS 1017 S+ H P LTDL+L RCS + AL A+ L + ++L S D G A GR ++ ++ L++C G+TD GL+ I + + L++L + V D + V C +L+ L C VTG RAF G R L+ L + C S +E + GC L+S+++S Sbjct: 32 SIDRWIHRFPNLTDLDLGRCSDVDDNALEAIGLHCTCLRYLNLEDSKVTDYGLRFLAH-GRCSKTLNTLVLAACYGITDLGLSHLQNFQFLLERDLDRCDVTDTGVIAATSSNRSLKKLNLGRLTNVSDQSMVYVAGNCPNLEILDLTGCSNVTGAGVRAFSGH-----------RCLESLVIRRC-EFCWSDIEHMVLGCQSLKSILLS 228 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1406.3030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1406.3030.1 >prot_L-elsbetiae_contig1406.3030.1 ID=prot_L-elsbetiae_contig1406.3030.1|Name=mRNA_L-elsbetiae_contig1406.3030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1516bp MSMADANMSRLDVQQELDAIKAERRHRQQALYDIHPPVSTVWPSPPLSRLback to top mRNA from alignment at L-elsbetiae_contig1406:624..21333- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1406.3030.1 ID=mRNA_L-elsbetiae_contig1406.3030.1|Name=mRNA_L-elsbetiae_contig1406.3030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=20710bp|location=Sequence derived from alignment at L-elsbetiae_contig1406:624..21333- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1406:624..21333- >mRNA_L-elsbetiae_contig1406.3030.1 ID=mRNA_L-elsbetiae_contig1406.3030.1|Name=mRNA_L-elsbetiae_contig1406.3030.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=9096bp|location=Sequence derived from alignment at L-elsbetiae_contig1406:624..21333- (Laminarionema elsbetiae ELsaHSoW15)back to top |