mRNA_L-elsbetiae_contig14059.3028.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LS86_ECTSI (PARP catalytic domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS86_ECTSI) HSP 1 Score: 406 bits (1043), Expect = 1.390e-138 Identity = 195/239 (81.59%), Postives = 213/239 (89.12%), Query Frame = 1 Query: 1 GPNPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKP---AGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLHE 708 GPNPE VDRTFRGGTTSADDFQLSVLTNRHPEYLSRK+QF++ W KP GVSVLRIFK++VP+DIRR+TE M QVGNV+RRFHGTSC+++CTFFVDLRGGPCGE TC VC+ICTHGF+LR NVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFL+SV VGRAF T +GKL P CPPPGFDSV+GE G LNYPEVVVY+EEAALPTHL+VY LHE Sbjct: 240 GPNPEPFVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKQQFMQKWEKPLVGTGVSVLRIFKVQVPKDIRRRTETCMGQVGNVQRRFHGTSCSNVCTFFVDLRGGPCGESTCKVCNICTHGFQLRDNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLSSVTVGRAFITYEGKLPPEQ--CPPPGFDSVVGEKGPALNYPEVVVYKEEAALPTHLIVYALHE 476
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LS87_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS87_ECTSI) HSP 1 Score: 301 bits (770), Expect = 1.470e-97 Identity = 142/238 (59.66%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 1 GPNPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKP---AGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLH 705 G N + +V+R F GTT DF+L VL+ HP Y S +QF+ W KP G+SV +I ++VP D+RRKT+ + + VGNV+RRFHGTSC+ C FFVDLRG PC + C VCSICTHGF L+GNVG TARRTNF LRYG+GLYFSSVSGKANDYA+ SEKTD +G+++RCMF+ +VA G+AF T + L N CPP G+DSV+GE G LNY E+VVY++EAALPTHL+VY+ H Sbjct: 220 GTNGDTYVERIFHRGTTGTTDFKLCVLSKAHPHYPSLIDQFVNKWVKPEPVGGISVEKILTVEVPADVRRKTKTYEKTVGNVRRRFHGTSCSTKCNFFVDLRGNPCSDKGCKVCSICTHGFTLQGNVGGTARRTNFGLRYGEGLYFSSVSGKANDYADFSEKTDSNGRRLRCMFVANVAAGKAFKTHETSLQ--QNECPPAGYDSVVGEVGQGLNYDELVVYKDEAALPTHLIVYSRH 455
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LKU8_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU8_ECTSI) HSP 1 Score: 277 bits (708), Expect = 3.120e-91 Identity = 131/230 (56.96%), Postives = 165/230 (71.74%), Query Frame = 1 Query: 13 ERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPAGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTL 702 + HV++TFRGGTT A DF LS L+ HP+Y S QF+ W KP VLRI ++KVP+DI +KT + + GNV+RRFHGTSC+ C FFVDL+G PC CNVC+ICTHGF LR NV TARR N+ RYG+GLYFSSVSGK+NDYA+ SEK GKKVRCMF+ +V G A+ T QG L ++CPP G+DSV+GE G L + E+V Y +EAA+P++L+VY L Sbjct: 5 QSHVEQTFRGGTTGATDFVLSALSKAHPQYPSLCHQFVSKWLKPGVPRVLRILEVKVPDDIYQKTVCYKKAKGNVRRRFHGTSCSAQCNFFVDLKGNPCSSKACNVCNICTHGFVLRDNVRGTARRANYRRRYGEGLYFSSVSGKSNDYAQQSEKVGSDGKKVRCMFVANVTAGNAYLTQQGSL--GQDMCPPAGYDSVVGEVGSGLIHDELVAYEDEAAIPSYLIVYAL 232
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LS88_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS88_ECTSI) HSP 1 Score: 248 bits (634), Expect = 3.640e-77 Identity = 122/234 (52.14%), Postives = 162/234 (69.23%), Query Frame = 1 Query: 13 ERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTLH 705 E +V + GT F L L HPE S + QF W KP G+SV+RIF+++VP ++R K +++ V N++RRFHGTSC+D C F VD + PCG +C++C+I GF+L NVG TA NF+LRYG G+YFSSVSGKANDYA+L+ KT + G K+RCMF+ +VA G+A++T + LD D CPPPG++SV+GE G LNY E+VVY+EEAALPTHL+VY LH Sbjct: 221 EPYVHGVYSVGTPR---FNLCALDEAHPECPSLRSQFSTKWVKPQPAEGISVVRIFRVEVPAEVRDKHDKYARTVRNIRRRFHGTSCSDGCNFIVDPQRSPCGLRSCSLCNISMRGFKLDENVGRTALARNFNLRYGKGVYFSSVSGKANDYADLTAKTAKDGTKLRCMFVANVAAGKAYSTKEKALD--DGKCPPPGYESVVGEVGQGLNYDELVVYKEEAALPTHLIVYALH 449
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LKU6_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU6_ECTSI) HSP 1 Score: 236 bits (602), Expect = 3.870e-74 Identity = 113/204 (55.39%), Postives = 140/204 (68.63%), Query Frame = 1 Query: 19 HVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPAGVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVD 630 HV + FRGGTT A DF LSVL+ H +Y S QF+ W K V RI ++KVP DI K + + GN++RRFHGTSC+ C FFVDL+G PC CNVC+ICT+GF L+GNVG TA+RT+ LRYG+GLYFSSVSGK+NDYA+ SEK GKKVRCMF+ +V G A+ T Q L N+CPP G DSV+GE ++ Sbjct: 69 HVQQVFRGGTTGATDFMLSVLSKSHHQYSSLCHQFISKWVKGGVPHVRRILEVKVPADIYGKYANYKKAKGNIRRRFHGTSCSAGCNFFVDLKGNPCSSRGCNVCNICTNGFMLQGNVGGTAKRTSIGLRYGEGLYFSSVSGKSNDYAQGSEKVGSDGKKVRCMFIANVTAGNAYLTQQVSL--GQNMCPPAGHDSVVGEAPIE 270
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LSB5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSB5_ECTSI) HSP 1 Score: 226 bits (575), Expect = 9.020e-69 Identity = 109/158 (68.99%), Postives = 125/158 (79.11%), Query Frame = 1 Query: 7 NPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA-GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEK 477 NPE HVDRTFRGG + DDF+LSVLT H Y S KEQFL + KP G+SV RIFK++VP D+R+K + E N +RRFHGTSC+D C FF+DLRGGPCG P CNVCSICTHGFRLRG+VG TA+RTN +LRYG+GLYFSSVSGKANDYA SEK Sbjct: 225 NPEAHVDRTFRGGPS--DDFKLSVLTKSHQAYSSLKEQFLVKFQKPVDGLSVERIFKVQVPGDVRQKHKVFEEATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSVGRTAQRTNMNLRYGEGLYFSSVSGKANDYAAQSEK 380
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: A0A6H5JBF5_9PHAE (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF5_9PHAE) HSP 1 Score: 216 bits (550), Expect = 2.810e-67 Identity = 113/216 (52.31%), Postives = 143/216 (66.20%), Query Frame = 1 Query: 70 LSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGG--PCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTL 702 L +L EY + + F W KP GVS+ R++ I+V ++R K ER+ GN+ +RFHGTSC + C F VD +GG PCG+ +C+VC+IC GF+L NV TAR T LRYG+G+Y +SVSGKANDYA S K ++RCMF+ SVAVGRAF T +L PA N CPPPG+ SV+GE G LN+ E VVY EEAALPTHL+VY L Sbjct: 17 LQMLEENSREYTALRGLFNARWMKPRPAKGVSIERVYSIQVSREMREKHERYKGMFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGKSSCSVCNICKLGFKLGANVAGTARATGVPLRYGEGIYLTSVSGKANDYASRSAKKIGIASELRCMFVASVAVGRAFKTKSTRL-PA-NQCPPPGYQSVVGEVGQGLNFDEFVVYNEEAALPTHLIVYAL 230
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: A0A6H5JPY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPY9_9PHAE) HSP 1 Score: 219 bits (558), Expect = 8.160e-67 Identity = 106/158 (67.09%), Postives = 122/158 (77.22%), Query Frame = 1 Query: 7 NPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA-GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGGPCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEK 477 NPE HVDRTFRGG + DDF+LSVLT H + S KEQFL + KP G+SV RIFK++VP D+R K + + N +RRFHGTSC+D C FF+DLRGGPCG P CNVCSICTHGFRLRG+ G TA+RTN LRYG+GLYFSSVSGKANDYA SEK Sbjct: 195 NPEAHVDRTFRGGPS--DDFKLSVLTKSHQAHSSLKEQFLVKFQKPIDGLSVERIFKVQVPGDVRHKHKVFEKATNNTRRRFHGTSCSDACRFFMDLRGGPCGRPDCNVCSICTHGFRLRGSAGRTAQRTNMKLRYGEGLYFSSVSGKANDYAAQSEK 350
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D7FXR2_ECTSI (PARP catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXR2_ECTSI) HSP 1 Score: 211 bits (536), Expect = 9.830e-63 Identity = 120/239 (50.21%), Postives = 152/239 (63.60%), Query Frame = 1 Query: 7 NPERHVDRTFRGG-TTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVGNVKRRFHGTSCTDICTFFVDLRGG--PCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGK-KVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVYTL 702 N E RT RG + L L E + + F W KP GVS++RIF I+V ++R K ER+ + GN+ +RFHGTSC + C F VD +GG PCGE +C+VC+IC GF+L NV TAR T F LRYG G+Y +SVSGKANDYA S K + G+ ++RCMF+ SVA+G F T +L PAD CPPPG+ SV+GE G LN+ E VVY+EEAALPTHL+VY L Sbjct: 192 NVEHEQRRTSRGVLSVGFSGSFLQRLEGNGAECKALCDLFNARWIKPRPENGVSIVRIFSIQVSREVREKHERYKGKFGNLCQRFHGTSCNEGCNFMVDPQGGQAPCGESSCSVCNICKLGFQLGPNVARTARATRFPLRYGAGIYLTSVSGKANDYASRSAK--KVGELELRCMFVASVALGNTFKTTSARL-PADQ-CPPPGYHSVVGEAGQRLNFDEFVVYKEEAALPTHLIVYAL 426
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Match: D8LKU5_ECTSI (TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKU5_ECTSI) HSP 1 Score: 209 bits (531), Expect = 8.150e-60 Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 1 Query: 70 LSVLTNRHPEYLSRKEQFLEAWAKPA---GVSVLRIFKIKVPEDIRRKTERHMEQVG-NVKRRFHGTSCTDICTFFVDLRGG--PCGEPTCNVCSICTHGFRLRGNVGDTARRTNFDLRYGDGLYFSSVSGKANDYAELSEKTDRSGKKVRCMFLTSVAVGRAFTTLQGKLDPADNLCPPPGFDSVMGEPGVDLNYPEVVVYREEAALPTHLVVY 696 L +L + EY + + F W KP GVS++RIF I+VP ++ K E + V N+++RFHGTSC D C F VD +G PCG +C+VC+IC GF+L NV TAR + LRYG G+YFSSVSGKANDYA LS KT G ++RCMF+ +VA G+AF+T + L ++ CPP G SV+GE G LNY EVVVY+EEAALPTHL+VY Sbjct: 462 LRILDDDDWEYEALCDLFKTRWLKPQPTNGVSIVRIFSIQVPLEVHDKHELYKRMVVVNLRQRFHGTSCNDGCNFMVDPQGATAPCGLSSCSVCNICMLGFKLGKNVARTARASGIPLRYGTGIYFSSVSGKANDYARLSAKTGSDGAELRCMFVANVAGGKAFSTKKSHLPQSE--CPPSGCQSVVGEVGHALNYDEVVVYKEEAALPTHLIVY 674 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14059.3028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14059.3028.1 >prot_L-elsbetiae_contig14059.3028.1 ID=prot_L-elsbetiae_contig14059.3028.1|Name=mRNA_L-elsbetiae_contig14059.3028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=237bp GPNPERHVDRTFRGGTTSADDFQLSVLTNRHPEYLSRKEQFLEAWAKPAGback to top mRNA from alignment at L-elsbetiae_contig14059:1462..4629- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14059.3028.1 ID=mRNA_L-elsbetiae_contig14059.3028.1|Name=mRNA_L-elsbetiae_contig14059.3028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3168bp|location=Sequence derived from alignment at L-elsbetiae_contig14059:1462..4629- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14059:1462..4629- >mRNA_L-elsbetiae_contig14059.3028.1 ID=mRNA_L-elsbetiae_contig14059.3028.1|Name=mRNA_L-elsbetiae_contig14059.3028.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1422bp|location=Sequence derived from alignment at L-elsbetiae_contig14059:1462..4629- (Laminarionema elsbetiae ELsaHSoW15)back to top |