prot_L-elsbetiae_contig14051.3024.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14051.3024.1
Unique Nameprot_L-elsbetiae_contig14051.3024.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length62
Homology
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: D8LIT3_ECTSI (Rab2B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIT3_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 3.270e-28
Identity = 52/55 (94.55%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLAAK 61
            RSYYRGTDGCLLVFDITDR SFEALPRWLDEAR NSANPDLSVMLIANKADLA K
Sbjct:   72 RSYYRGTDGCLLVFDITDRKSFEALPRWLDEARMNSANPDLSVMLIANKADLAEK 126          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: A0A8J2S4D0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S4D0_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 2.000e-18
Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLAAK 61
            RSYYRGTD CLLV+D+T R SF+ L RWL EAR N+ANPDL +ML+ NKADL +K
Sbjct:   79 RSYYRGTDCCLLVYDVTRRESFDHLGRWLQEARQNAANPDLVLMLVGNKADLESK 133          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: F0Y2Q0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2Q0_AURAN)

HSP 1 Score: 81.3 bits (199), Expect = 1.590e-17
Identity = 35/52 (67.31%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADL 58
            RSYYRGTD CLLV+D+T R SF+ LPRWL+EA+ N++NP+L +ML+ NKADL
Sbjct:   80 RSYYRGTDCCLLVYDVTRRESFDHLPRWLNEAKQNASNPNLVLMLVGNKADL 131          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: A0A482RRM4_9ARCH (GTP-binding protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RRM4_9ARCH)

HSP 1 Score: 80.1 bits (196), Expect = 4.710e-17
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLAAK 61
            RSYYRG DGCLLVFD++++ SFE L  WL EAR NS NP+L +++I NKADL +K
Sbjct:   81 RSYYRGADGCLLVFDLSNKLSFENLSMWLSEARQNSNNPNLVILMIGNKADLTSK 135          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: A0A7S3NND1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NND1_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 5.650e-17
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADL 58
            RSYYRGTD CLLV+D+T R +F  LPRWL+EAR NSANP+L +ML+ NK DL
Sbjct:   93 RSYYRGTDCCLLVYDVTRRDTFVNLPRWLNEARQNSANPNLVLMLVGNKVDL 144          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: K8YRJ3_NANGC (Rab family gtpase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YRJ3_NANGC)

HSP 1 Score: 71.6 bits (174), Expect = 8.720e-15
Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 PLPSRYRSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLAA 60
            PL S + SYYR  DGCL+VFD+T R SFE + +W + AR  S NP L   L+ NKAD AA
Sbjct:    3 PLRSPFLSYYRNADGCLIVFDLTQRESFEKVSKWAEHARQYSNNPHLVFTLVGNKADQAA 62          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: A0A7S1KYF4_NEODS (Hypothetical protein n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1KYF4_NEODS)

HSP 1 Score: 70.5 bits (171), Expect = 2.310e-13
Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLAAK 61
            RSYYRG  G LLVFD+T+RASF++L  WLD+AR N  N  ++VML+ NK+DL +K
Sbjct:   74 RSYYRGACGALLVFDVTNRASFQSLQGWLDDARAN-CNVPITVMLVGNKSDLESK 127          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: Q382G2_TRYB2 (Small GTPase, putative n=5 Tax=Trypanozoon TaxID=39700 RepID=Q382G2_TRYB2)

HSP 1 Score: 69.7 bits (169), Expect = 3.740e-13
Identity = 30/53 (56.60%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLA 59
            RSYYRG  GCL+V+DIT+R S+E++P+WL++ R   A PD+ VMLI NK+D++
Sbjct:   75 RSYYRGAVGCLIVYDITERTSYESVPQWLNDVR-QLAGPDVVVMLIGNKSDMS 126          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: A0A024UI87_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UI87_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 5.990e-13
Identity = 31/53 (58.49%), Postives = 38/53 (71.70%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADLA 59
            RSYYRG DG LLV+DI  R+SFE L RWL E + N  NP L +M++  KAD+A
Sbjct:   72 RSYYRGADGVLLVYDIGKRSSFEHLGRWLQECQQNCMNPSLEIMVVGMKADIA 124          
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Match: A0A485LGB1_9STRA (Aste57867_20924 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGB1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.180e-12
Identity = 31/52 (59.62%), Postives = 37/52 (71.15%), Query Frame = 0
Query:    7 RSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVMLIANKADL 58
            RSYYRG DG LLV+DI  R+SFE L RWL E + N  NP L +M++  KADL
Sbjct:   72 RSYYRGADGVLLVYDIGKRSSFEHLGRWLQECQQNCMNPSLEIMVVGMKADL 123          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14051.3024.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIT3_ECTSI3.270e-2894.55Rab2B, RAB family GTPase n=2 Tax=Ectocarpus TaxID=... [more]
A0A8J2S4D0_9STRA2.000e-1869.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y2Q0_AURAN1.590e-1767.31Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A482RRM4_9ARCH4.710e-1763.64GTP-binding protein (Fragment) n=1 Tax=archaeon Ta... [more]
A0A7S3NND1_9STRA5.650e-1769.23Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K8YRJ3_NANGC8.720e-1555.00Rab family gtpase n=1 Tax=Nannochloropsis gaditana... [more]
A0A7S1KYF4_NEODS2.310e-1360.00Hypothetical protein n=1 Tax=Neobodo designis TaxI... [more]
Q382G2_TRYB23.740e-1356.60Small GTPase, putative n=5 Tax=Trypanozoon TaxID=3... [more]
A0A024UI87_9STRA5.990e-1358.49Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A485LGB1_9STRA1.180e-1259.62Aste57867_20924 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 2..61
e-value: 0.0041
score: -70.8
NoneNo IPR availableGENE3D3.40.50.300coord: 3..61
e-value: 2.1E-17
score: 65.1
NoneNo IPR availablePANTHERPTHR24073:SF972RAS-RELATED PROTEIN RABB1Bcoord: 6..59
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 6..59
NoneNo IPR availablePROSITEPS51419RABcoord: 1..61
score: 11.355
IPR001806Small GTPasePFAMPF00071Rascoord: 7..60
e-value: 6.6E-13
score: 48.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14051contigL-elsbetiae_contig14051:272..457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14051.3024.1mRNA_L-elsbetiae_contig14051.3024.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14051 272..457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14051.3024.1 ID=prot_L-elsbetiae_contig14051.3024.1|Name=mRNA_L-elsbetiae_contig14051.3024.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=62bp
PLPSRYRSYYRGTDGCLLVFDITDRASFEALPRWLDEARTNSANPDLSVM
LIANKADLAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase