mRNA_L-elsbetiae_contig14045.3020.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig14045.3020.1
Unique NamemRNA_L-elsbetiae_contig14045.3020.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: D8LGL7_ECTSI (Protein kinase domain-containing protein n=3 Tax=PX clade TaxID=569578 RepID=D8LGL7_ECTSI)

HSP 1 Score: 364 bits (934), Expect = 1.010e-124
Identity = 170/179 (94.97%), Postives = 173/179 (96.65%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   +  RYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVN ENQHLVSE+AISFVGQ+
Sbjct:  121 PTLTDYDIRYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNTENQHLVSEDAISFVGQL 299
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: B8BUK1_THAPS (Protein kinase domain-containing protein n=16 Tax=Bacillariophyta TaxID=2836 RepID=B8BUK1_THAPS)

HSP 1 Score: 340 bits (872), Expect = 1.090e-115
Identity = 155/179 (86.59%), Postives = 167/179 (93.30%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   F  RYYIFELLKALDY HSNG+MHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLD Y+LELDPHFDGI+GRHS +PWQKFV  +NQHL+SEEAI FV ++
Sbjct:  121 PTLSDFDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNDNQHLISEEAIDFVSKL 299
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A7S1H3V8_9STRA (Hypothetical protein n=2 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1H3V8_9STRA)

HSP 1 Score: 339 bits (870), Expect = 1.240e-115
Identity = 152/179 (84.92%), Postives = 168/179 (93.85%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   +  RYYIFELLKALDY HSNG+MHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLD Y+LELDPHFDGI+GRHS +PWQKF+ PENQHLVS++++ FV ++
Sbjct:  100 PTLSDYDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSRKPWQKFITPENQHLVSDDSLDFVSKL 278
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: K0SUK6_THAOC (Protein kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUK6_THAOC)

HSP 1 Score: 337 bits (863), Expect = 4.940e-112
Identity = 152/179 (84.92%), Postives = 167/179 (93.30%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   +  RYYIFELLKALDY HSNG+MHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDY+LDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLD Y+LELDPHFDGI+GRHS +PWQKFV  ENQHL+S+E+I FV ++
Sbjct:  236 PTLSDYDIRYYIFELLKALDYCHSNGVMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTEELFHYLDTYDLELDPHFDGILGRHSKKPWQKFVTNENQHLISDESIDFVSKL 414
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A7S3WWA4_9SPIT (Hypothetical protein n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3WWA4_9SPIT)

HSP 1 Score: 327 bits (838), Expect = 1.550e-111
Identity = 148/179 (82.68%), Postives = 164/179 (91.62%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   F  R+YI+ELLKAL++SHSNGIMHRDVKPHNVMIDHE++QLRLIDWGLAEFYHP RE+NVRVASRYFKGPELLVDLQ+YDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELF+YLDKY LELDPHFDG++GRH  +PW KF+N ENQHLVS EAI  + ++
Sbjct:   58 PTLTDFDVRFYIYELLKALEHSHSNGIMHRDVKPHNVMIDHEKRQLRLIDWGLAEFYHPEREFNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFDYLDKYNLELDPHFDGLLGRHMRKPWSKFINAENQHLVSPEAIDLLDRL 236
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A7S2Y1K0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K0_9STRA)

HSP 1 Score: 329 bits (843), Expect = 4.140e-111
Identity = 150/179 (83.80%), Postives = 161/179 (89.94%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT      RYYI+ELLKALDY HSNGIMHRDVKPHNVMIDHE++ LRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELF YLD Y+LELDP FDGI+GRH+ +PWQ+FV  +NQHLV+EEAI FV  +
Sbjct:  121 PTLTDLDTRYYIYELLKALDYCHSNGIMHRDVKPHNVMIDHERRHLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDYQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFQYLDTYDLELDPQFDGILGRHTKKPWQRFVTTDNQHLVTEEAIDFVSNL 299
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A7S2W3V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W3V8_9STRA)

HSP 1 Score: 328 bits (842), Expect = 8.710e-111
Identity = 150/179 (83.80%), Postives = 161/179 (89.94%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   +  RYYI ELLKAL+Y HSNGIMHRDVKPHNVMIDHE++QLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVD QEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDEL  YLD+YELELDP FDG++GRHS +PWQ F+N ENQHL S EAI +VG +
Sbjct:  127 PTLSDYDIRYYILELLKALEYCHSNGIMHRDVKPHNVMIDHERRQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDFQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELIQYLDRYELELDPQFDGLIGRHSKKPWQNFLNSENQHLCSPEAIDYVGSL 305
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A812SZF3_SYMMI (CKA4 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SZF3_SYMMI)

HSP 1 Score: 322 bits (826), Expect = 7.900e-109
Identity = 145/176 (82.39%), Postives = 162/176 (92.05%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFV 528
            PT   +  RYYIFELLKALD+ H+NGIMHRDVKPHNVMIDH++++LRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDY LDMWSLGCMFAGMIFRKEPFFHG DNYDQLVKIAKVLGTDELF YLD+Y+LELD HFDG++GRH+ + W +F+N ENQHLVSEEA+SF+
Sbjct:  116 PTLLDYDIRYYIFELLKALDFCHANGIMHRDVKPHNVMIDHDKRELRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYGLDMWSLGCMFAGMIFRKEPFFHGQDNYDQLVKIAKVLGTDELFEYLDRYDLELDSHFDGLLGRHTKKSWNRFINAENQHLVSEEAMSFL 291
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A0M0LQP0_9EUKA (Casein kinase ii alpha subunit n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0LQP0_9EUKA)

HSP 1 Score: 323 bits (829), Expect = 1.250e-108
Identity = 145/179 (81.01%), Postives = 164/179 (91.62%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            PT   F  RYYIFELLKAL++ HS+GIMHRDVKPHNVMIDHE+++LRLIDWGLAEFYHP REYNVRVASRYFKGPELLVDLQ+YDY+LDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKI KVLGT+ELF+YLDKY LELDPHFDGI+GRH+ +PW KF+NP+NQHLVS EA+  + ++
Sbjct:  121 PTFTDFDIRYYIFELLKALEFCHSHGIMHRDVKPHNVMIDHEKRRLRLIDWGLAEFYHPEREYNVRVASRYFKGPELLVDLQDYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIVKVLGTEELFDYLDKYNLELDPHFDGILGRHARKPWSKFLNPDNQHLVSPEAVDLLDKL 299
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BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Match: A0A8J5XGK7_DIALT (Protein kinase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XGK7_DIALT)

HSP 1 Score: 324 bits (831), Expect = 1.300e-108
Identity = 146/179 (81.56%), Postives = 164/179 (91.62%), Query Frame = 1 
Query:    1 PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLIDWGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGRHSNRPWQKFVNPENQHLVSEEAISFVGQV 537
            P+   +  RYYIFELLKALD+ HSNGIMHRDVKPHNVMIDHE+++LRLIDWGLAEFYHP REYNVRVASRYFKGPELL+DLQ+YDY+LDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGT+ELF+YLDKY LELDPHFDGI+GRH  RPWQKFV  +NQHLV+ +AI F+ ++
Sbjct:  121 PSLKEYDVRYYIFELLKALDFCHSNGIMHRDVKPHNVMIDHEKRELRLIDWGLAEFYHPEREYNVRVASRYFKGPELLIDLQDYDYALDMWSLGCMFAGMIFRKEPFFHGHDNYDQLVKIAKVLGTNELFDYLDKYSLELDPHFDGILGRHVRRPWQKFVTADNQHLVTPDAIDFLDKL 299
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14045.3020.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGL7_ECTSI1.010e-12494.97Protein kinase domain-containing protein n=3 Tax=P... [more]
B8BUK1_THAPS1.090e-11586.59Protein kinase domain-containing protein n=16 Tax=... [more]
A0A7S1H3V8_9STRA1.240e-11584.92Hypothetical protein n=2 Tax=Bacillariophyta TaxID... [more]
K0SUK6_THAOC4.940e-11284.92Protein kinase domain-containing protein (Fragment... [more]
A0A7S3WWA4_9SPIT1.550e-11182.68Hypothetical protein n=2 Tax=Choreotrichia TaxID=1... [more]
A0A7S2Y1K0_9STRA4.140e-11183.80Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S2W3V8_9STRA8.710e-11183.80Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A812SZF3_SYMMI7.900e-10982.39CKA4 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
A0A0M0LQP0_9EUKA1.250e-10881.01Casein kinase ii alpha subunit n=1 Tax=Chrysochrom... [more]
A0A8J5XGK7_DIALT1.300e-10881.56Protein kinase domain-containing protein n=1 Tax=D... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14045contigL-elsbetiae_contig14045:1119..4535 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.4
Seed ortholog evalue3.1e-98
Seed eggNOG ortholog2880.D8LGL7
Preferred nameCKA2
KEGG koko:K03097
KEGG Pathwayko03008,ko04064,ko04137,ko04139,ko04310,ko04520,ko04712,ko05162,ko05168,ko05169,map03008,map04064,map04137,map04139,map04310,map04520,map04712,map05162,map05168,map05169
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005829,GO:0005956,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009536,GO:0009628,GO:0009648,GO:0009791,GO:0009987,GO:0010019,GO:0010212,GO:0010225,GO:0010229,GO:0010332,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0022414,GO:0022607,GO:0023052,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0040008,GO:0042752,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046777,GO:0048367,GO:0048511,GO:0048580,GO:0048583,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051239,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0051726,GO:0061458,GO:0065003,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0080134,GO:0080135,GO:0090304,GO:0090567,GO:0140096,GO:1901360,GO:1901564,GO:2000026,GO:2000028,GO:2000241,GO:2001020
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0668@1,KOG0668@2759
EC2.7.11.1
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-10_002680.1
Exons3
Model size537
Cds size537
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14045.3020.1prot_L-elsbetiae_contig14045.3020.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig14045 1119..4535 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815555.6541288-CDS-L-elsbetiae_contig14045:1118..13371622815555.6541288-CDS-L-elsbetiae_contig14045:1118..1337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14045 1119..1337 +
1691682957.024595-CDS-L-elsbetiae_contig14045:1118..13371691682957.024595-CDS-L-elsbetiae_contig14045:1118..1337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14045 1119..1337 +
1622815555.67274-CDS-L-elsbetiae_contig14045:2990..31371622815555.67274-CDS-L-elsbetiae_contig14045:2990..3137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14045 2991..3137 +
1691682957.0372617-CDS-L-elsbetiae_contig14045:2990..31371691682957.0372617-CDS-L-elsbetiae_contig14045:2990..3137Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14045 2991..3137 +
1622815555.687256-CDS-L-elsbetiae_contig14045:4364..45351622815555.687256-CDS-L-elsbetiae_contig14045:4364..4535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14045 4365..4535 +
1691682957.0468755-CDS-L-elsbetiae_contig14045:4364..45351691682957.0468755-CDS-L-elsbetiae_contig14045:4364..4535Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig14045 4365..4535 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig14045.3020.1

>prot_L-elsbetiae_contig14045.3020.1 ID=prot_L-elsbetiae_contig14045.3020.1|Name=mRNA_L-elsbetiae_contig14045.3020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=179bp
PTRPTFRERYYIFELLKALDYSHSNGIMHRDVKPHNVMIDHEQKQLRLID
WGLAEFYHPGREYNVRVASRYFKGPELLVDLQEYDYSLDMWSLGCMFAGM
IFRKEPFFHGHDNYDQLVKIAKVLGTDELFNYLDKYELELDPHFDGIMGR
HSNRPWQKFVNPENQHLVSEEAISFVGQV
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mRNA from alignment at L-elsbetiae_contig14045:1119..4535+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig14045.3020.1 ID=mRNA_L-elsbetiae_contig14045.3020.1|Name=mRNA_L-elsbetiae_contig14045.3020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3417bp|location=Sequence derived from alignment at L-elsbetiae_contig14045:1119..4535+ (Laminarionema elsbetiae ELsaHSoW15)
CCAACGCGACCAACTTTTCGAGAAAGGTATTACATCTTCGAGCTGCTTAA
GGCGCTGGACTACTCGCACTCCAACGGGATCATGCACCGGGACGTGAAGC
CGCACAACGTCATGATCGACCACGAGCAGAAGCAGCTCCGGCTGATCGAC
TGGGGGCTGGCGGAGTTCTACCACCCGGGGAGGGAGTACAACGTGCGGGT
GGCGTCGCGGTACTTCAAGGTGCGTGTCGAGTCTTGTGTGCTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTTTTTTTTTTTCACATTTGTTTCCAGTGCTC
GACAGGCTCCTTGCCACGAAGGCGTATACTTGCCAGAGTACTGAACCGTG
GTCACACAGAAGGGCTCCTTTCCCCGAGGCCCCCACTCCCCCCTTCTGCG
GTGCTTGCCTATGATTTTTGTCGCGAGAAGAGTCCAGCCGAGAACGGTCC
AGCCGTCCCTTTCCCTTGCATGTGCGAAGTATGAACATGCACGACGTTTT
AACGCACTGTCTGTTCTTCTTTACAGTAATAAGATGTTCCTTGCTGGGAA
CGCGTATTCGAGCACGTGTCGGTTCATCTGATTGGCCTAAAGGCTGACCA
ATGAACACACGACCCCAAAGGTCCTGAGCGGACCGATATATTGAACAAGA
TGTTTATTGTCGGTGGTACATGGCATATGGTGGTACAAATCGCGGCCCTG
CGAGGGGGAAAGAGACAGCAGTACTGTAGGTGACACAAGATACCACACCC
CCTGGATCGAATTTGAGAGCTCCATTACTCCGTAACGACGAGGGTGCCAG
CACCAAACGACACACTTTCGGACGGCCCTCGACTAGATCTTTCCAACGCC
ACCCCTTTCGGCACTAGCACCCTTCTTGCTGGGGAGGAATCGAGCTTTGA
AAATATGCCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAGTTGAGCT
CTTCTCGCGGGCTAAAGGGTGGGTGGGGTGGGTGTGCCGTCCTCAGGAGA
GGAAAGCCTGTGTGTGTGGCCACGTTGCCACGGACCAAAGCTCTGGCAAG
ATGGATGCGCCGCCCTGCGAGCGCGCTTGTTTTACTGCTTTTGTCACATG
CAAAAACAAGAAACAGAAACAGGAGCGCGGAAAACACGGTTTTGCTATCC
CCATCAATCACTCCGTCGTCCCGGGCGCGCGGCGCACGCCACGTGTGCAC
GCATCAGAAGTCAGTGCACAGGGGCGCAAACGGTCTACCACTAGAGCGGC
AAACCACAGGGGGCTCGTTCAAGTGCCTCACGACCCTACTTCCTACTGCT
TGGCTGTATGAAGGTCGTGCACTGCTGCGTGTTTCTCAACCCGCCCATTG
GGTGTTTCGACTCGTCACCAGCGAGCGGTGTGTGTGTGTTTCACCACTTC
TTGCTCTTACCTCTTACCTCTTACCGCCCCCCCCCGCCCCGCCTCTCCTC
CCCGCTCTCTCCGCCCTTTTGGTAAGAATTGATCCGGGTGTGGTCCGATT
TTTCGTCGGCGTCCTGCCTGCCTGCCTCAGCGCACACGCAAAAGAGGCCG
GCGTTTGCTGGCGGATTCCATTAATTCTCTCTGAACGTTGCGGTTGCACC
GCCGTGCACCACCACCACCCCCAGCTTTCTCATCATCGTTTGCTCCCTCT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCT
CCGACCCGGGCCCCCTCTTTGCCGGGCAACATCGTGTGGGGTGATTGTTG
TGAGNNNNNNNNNNCTATAATTCTCTCCTACCGTTGGGGTTGCCCCCCCG
TGCCCCCCCCCCCCCCCCCGCTTTCTCATCCTCTTTTGCTCCCTCCCCCC
CCCCCCCCCCCTCAAATCGCAGGGCCCGGAGTTGTTGGTGGACCTCCAGG
AGTACGACTACTCGTTGGACATGTGGTCCTTGGGGTGTATGTTCGCGGGG
ATGATATTCCGGAAAGAGCCATTCTTCCACGGGCACGACAACTACGACCA
GCTGGTCAAGATTGCCAAGGTACGTAGGCATAGGATTCCTGTAGCAGGGC
CGGCCCCCAGTTCGGAGAATGGGGACTGTGGGGGATTTTTCACTCTATTT
CCTAGTTAAATACCCCCCCCCCCTCGCGCGCGCGCGCGCGCTGCCCCCAC
AGCTCCTTTTGAGAACTGGGGACTCTATTGGCACGAAACATATGCATAGT
GTGATAGTTTTACATCGCATACATGTACATTTTTAAAAATAAACAATGAA
TCAAAGATGGAACCCTACCCCACACTATTTAGGGCAAGGACTCGATATGG
GGTTCAAACGGTATTCCATACAGAGATACATGTACATTGTTGTATACTAC
ATCAATACATATGTACGTATCTCGAAGCATGCGTGAAAGGCCGAGACAGA
ACCGAGACACGAGGAAGACAACAGGGGGCTTCAAGTTCCGTATCAGCAGC
GCGACAGCGAAGGTGGTGGTGTATGTACGCCGTGTCTTGTTACAGGCGCA
AAAGACGAAATACGGGGCGTGCCGGTGAGGGTGGGGGGCCCGTGGGTGTG
TGTTCTTGTTGACATGTAGTTTAGGAATATGTTTTTTGATCTGTATCTTT
TGACAAGACACGAACCGCGCGAAACACGTACCGTGTGTATTTATATATGT
ACGGTGTTGGATCGTTTTGCAGCAGTTGTGTAGCCGCAGCAGCCAAGCCA
ACAAGCAACAGCGTTTTTTTTTTCCTCTCTTCCCCGCCTCCCTGAAAAGA
AAAACCTTGCACATACTACGTTTTGGACGAACCTGCCCTTTTCTCTTAAA
TAGCATCCTTTCGTCTCTCTCTATCTAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGACCCGTACATATGTGTGTAAGCAAAA
CCCGCAGGCAACAACCAGTATATAATGGTGTGTTAAGTTTTATTGAATTG
CTAGTTATTTGGTTTGGCGAAGGGAATTTACTCCAGGATACACTTGGGGA
AAGGAACCCTTCTGTGTTACCACGGTTCAGTACTCTGGTAAGATGTCCTC
GTGACAGGAAGCCAGCCCATCGAGCACTGGAAATAAATGTGAAGAAGAAA
AACACACACACACACACACACACACACACGGAATACGCACGTACATACAT
ACATATGTGTATGGAGAGAGAGCCAACTTTTGCCCGCCATTTTTGCCGTC
GATTCCGTGCGTTTTTCTTCTTTTTTTTCTTCTGTTGTCTCACCAGGTGC
TGGGCACTGACGAGCTGTTCAACTACCTGGACAAGTACGAGCTAGAGCTG
GACCCCCACTTCGACGGCATCATGGGCCGGCACAGCAACCGGCCGTGGCA
GAAGTTCGTCAACCCGGAGAACCAGCACCTCGTCTCGGAGGAGGCTATCA
GCTTCGTGGGACAGGTG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig14045:1119..4535+

>mRNA_L-elsbetiae_contig14045.3020.1 ID=mRNA_L-elsbetiae_contig14045.3020.1|Name=mRNA_L-elsbetiae_contig14045.3020.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1074bp|location=Sequence derived from alignment at L-elsbetiae_contig14045:1119..4535+ (Laminarionema elsbetiae ELsaHSoW15)
CCAACGCGACCAACTTTTCGAGAAAGGTATTACATCTTCGAGCTGCTTAA
GGCGCTGGACTACTCGCACTCCAACGGGATCATGCACCGGGACGTGAAGC
CGCACAACGTCATGATCGACCACGAGCAGAAGCAGCTCCGGCTGATCGAC
TGGGGGCTGGCGGAGTTCTACCACCCGGGGAGGGAGTACAACGTGCGGGT
GGCGTCGCGGTACTTCAAGCCAACGCGACCAACTTTTCGAGAAAGGTATT
ACATCTTCGAGCTGCTTAAGGCGCTGGACTACTCGCACTCCAACGGGATC
ATGCACCGGGACGTGAAGCCGCACAACGTCATGATCGACCACGAGCAGAA
GCAGCTCCGGCTGATCGACTGGGGGCTGGCGGAGTTCTACCACCCGGGGA
GGGAGTACAACGTGCGGGTGGCGTCGCGGTACTTCAAGGGCCCGGAGTTG
TTGGTGGACCTCCAGGAGTACGACTACTCGTTGGACATGTGGTCCTTGGG
GTGTATGTTCGCGGGGATGATATTCCGGAAAGAGCCATTCTTCCACGGGC
ACGACAACTACGACCAGCTGGTCAAGATTGCCAAGGGCCCGGAGTTGTTG
GTGGACCTCCAGGAGTACGACTACTCGTTGGACATGTGGTCCTTGGGGTG
TATGTTCGCGGGGATGATATTCCGGAAAGAGCCATTCTTCCACGGGCACG
ACAACTACGACCAGCTGGTCAAGATTGCCAAGGTGCTGGGCACTGACGAG
CTGTTCAACTACCTGGACAAGTACGAGCTAGAGCTGGACCCCCACTTCGA
CGGCATCATGGGCCGGCACAGCAACCGGCCGTGGCAGAAGTTCGTCAACC
CGGAGAACCAGCACCTCGTCTCGGAGGAGGCTATCAGCTTCGTGGGACAG
GTGGTGCTGGGCACTGACGAGCTGTTCAACTACCTGGACAAGTACGAGCT
AGAGCTGGACCCCCACTTCGACGGCATCATGGGCCGGCACAGCAACCGGC
CGTGGCAGAAGTTCGTCAACCCGGAGAACCAGCACCTCGTCTCGGAGGAG
GCTATCAGCTTCGTGGGACAGGTG
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