prot_L-elsbetiae_contig14040.3018.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14040.3018.1
Unique Nameprot_L-elsbetiae_contig14040.3018.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1042
Homology
BLAST of mRNA_L-elsbetiae_contig14040.3018.1 vs. uniprot
Match: A0A6H5KF78_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF78_9PHAE)

HSP 1 Score: 536 bits (1382), Expect = 2.160e-164
Identity = 361/663 (54.45%), Postives = 420/663 (63.35%), Query Frame = 0
Query:  419 AEASGNRLHEQAREARERLERRRTEGG---ASPPPPFLSAPAXXXXXXXXXXXLTLTPASAEASGNRLHGQARETRERLERRRKEGVAASPLLAGPGLMPFAPRRWSTPRPPGPGANV-PSVTGLERLESLYRDAIQRNSRLEMARRAEEEKPRDCTFTPEISRRGRSLVRVASGDSFGASAGGAGGAGKGG-----------------GLWDTFEVLYEDAKRRREKIEALKGAQELMTRPPSPLITAMGRQVVRDPIDVRMKLEAERWARRWEELEEKKIQREEDGCTFMPDFTIGRRSSSAPRLRPGRSD---------PGGPGGIEAFMERSARFLETRERNIEKLKQEADERELAETTFKPRILPWGGGXXDETASAGAGSSVAGGEDVFERLLRAAENQEMNKAALKQEFLLREQELYNNFEPRLTTRQSEGPTTPLEDRIKNSTEEWLKSKALREQRRRELEAEPCTFRPSLAAGA---------------------------GAGQRRSSSVDPRARARSSRPSSTAPSSRRGSAAASAFSAREAVFQESKAQRLDALPKEKERLELQEATFQPVLGAEGRGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESKAAPRGALGRKDPVGFKSQGSAPARSRESSTTTATSGQQ 1024
            AEASGNRLHEQAREARERLERRRT GG   A+ PP  +S+P            LTL+PA AEASGNRLH QARE RERLERRRKE    +PL   PGL  F+PRRWS PR P  GA   P V+G +RLE LYRDAI+RNSRLE+ARRAEEE+PR+CTFTPEIS+RGRSLVR  S D         GG G+                    L+DTF+ LY+DAKRR+ K+EALKGA E + R  SP+ITAMGRQ    PIDVRMK +AERW RR++ELEEKK ++E++GCTFMP+F+IGR SSSAPR+RP RS+               IEAF+ RSA FLE RERN++KLK+EA+ERE A  TFKP ILPWGG    + ASA A        DVFERLLRAAENQEMNKAALK+EFL +E+E YN+FEPRL TRQ + P  PL+ RI+ STEEW+K+KALREQRR ELEAE CTFRPSL  G                                          R R+SR +S       G AAA+AF+AREA FQ++K QRL+AL KEKE+LELQEATFQPV+GAE R A                               E+K      + R+  V FK QGSA ARSRESS   AT GQQ
Sbjct:  671 AEASGNRLHEQAREARERLERRRTVGGGAGAASPPFVMSSPLLFTPTRGVA--LTLSPALAEASGNRLHEQAREARERLERRRKEVPVVTPLAPMPGLTSFSPRRWSAPRGPAGGAGAAPVVSGPDRLEGLYRDAIERNSRLELARRAEEERPRECTFTPEISKRGRSLVRGYSSD---------GGGGEXXXXXXXXXXXXXXXXXXXSLFDTFDALYQDAKRRQAKMEALKGAHEEVGRRTSPVITAMGRQATGVPIDVRMKEDAERWVRRFQELEEKKAEKEKEGCTFMPNFSIGR-SSSAPRMRPRRSNGXXXXXXXXXXXXXXIEAFVARSAIFLEARERNMKKLKEEAEERERALATFKPSILPWGGRSAADDASAAA--------DVFERLLRAAENQEMNKAALKEEFLKKEREQYNDFEPRLPTRQKDAPMEPLDARIRRSTEEWVKNKALREQRRLELEAEHCTFRPSLGGGGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTRQRASRRASGGV----GPAAAAAFAAREAAFQDAKKQRLEALRKEKEQLELQEATFQPVIGAEARRAGDRGGDPVGGSSRGTDAVAGSVTGAS-----ETKVTTPVTVERRSSVEFKPQGSARARSRESSDIAATDGQQ 1304          
BLAST of mRNA_L-elsbetiae_contig14040.3018.1 vs. uniprot
Match: D8LNB8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNB8_ECTSI)

HSP 1 Score: 505 bits (1301), Expect = 3.810e-153
Identity = 365/716 (50.98%), Postives = 430/716 (60.06%), Query Frame = 0
Query:  298 PISDRKAAPVARGVSPGRKP-PS-PAR-RGRQAA---QRLSASATPVRVSPGAGEVSRATPAVSVTPGLHPLPLPPPPLASNA-----VEPSPQRHR-AESPARQKRGVSPAGSVTPARAAASPPARVMTPASAEASGNRLHEQAREARERLERRRTEGGASPPPPFLSAPAXXXXXXXXXXXLTLTPASAEASGNRLHGQARETRERLERRRKEGVAASPLLAGPGLMPFAPRRWSTPRPPGPGANV-PSVTGLERLESLYRDAIQRNSRLEMARRAEEEKPRDCTFTPEISRRGRSLVRVASGDSFGASAGGAGGAGKGGG----------------LWDTFEVLYEDAKRRREKIEALKGAQELMTRPPSPLITAMGRQVVRDPIDVRMKLEAERWARRWEELEEKKIQREEDGCTFMPDFTIGRRSSSAPRLRPGRSDPGGPG-----GIEAFMERSARFLETRERNIEKLKQEADERELAETTFKPRILPWGGGXXDETASAGAGSSVAGGEDVFERLLRAAENQEMNKAALKQEFLLREQELYNNFEPRLTTRQSEGPTTPLEDRIKNSTEEWLKSKALREQRRRELEAEPCTFRPSLAAGAGAGQRRSSSVDPR---------------------------ARARSSRPSSTAPSSRRGSAAASAFSAREAVFQESKAQRLDALPKEKERLELQEATFQPVLGAEGRGA 952
            P   ++A  V R  SP RKP PS PAR RG+ AA   Q  S ++TPVRVSP AGEVSRA P V+VTPGLH    P PP    A     VE SP+  R   SPAR++RG SP        A A+ P  VM+                                   P L  P            +TL+PASAEASGNRLH QARE          E    +PL   PG   F+PRRWS PR P  GA   P V+GL+RLE LYRDAI+RNSRLE+ARRAEEEKPR+CTFTPEIS+RGRSLVR  SGD                                 L+DTF+ LY+DAKRR+ K+EALK  +E+ TR  SP+ITAMGRQ    P+DVRMK +AERW RR++ELEEKK ++E++GCTFMP+F+IGR SSSAPR+RP RS+          GIEAF+ RSA FLETRERN+EKLKQEA+ERE A  TFKP ILPWGGG   + AS+ A        DVFERLLRAAENQEMNKAALK+EFL +E+E  N+FEPRL TRQ + P  PL+ RI+ STEEW+K+KALREQRR ELEAE CTFRPSL  G                                          R R+SR +S       G AAA+AF+AREA FQ++K QRL+AL KEKE+LE+QEATFQPV+GAE R A
Sbjct:  571 PGRQKRAGSVGRSASPMRKPSPSVPARPRGQPAASQQQPRSVTSTPVRVSPAAGEVSRANPTVAVTPGLHAA-TPSPPXXXRAXXXXVVETSPRPRRPTSSPARRERGASPRXXTVGGGAGAASPPFVMSS----------------------------------PLLFTPTRGVA-------VTLSPASAEASGNRLHEQAREAXXXXXXXXXEVPVVTPLAPMPGFTSFSPRRWSAPRGPAGGAGAAPVVSGLDRLEGLYRDAIERNSRLELARRAEEEKPRECTFTPEISKRGRSLVRGYSGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFDTFDALYQDAKRRQAKMEALKAHEEVGTRT-SPVITAMGRQATGVPVDVRMKEDAERWVRRFQELEEKKAEKEKEGCTFMPNFSIGR-SSSAPRMRPRRSNXXXXXXXXXXGIEAFVARSAIFLETRERNMEKLKQEAEERERALATFKPSILPWGGGSAADDASSAA--------DVFERLLRAAENQEMNKAALKEEFLKKEREQNNDFEPRLPTRQKDAPLEPLDARIRKSTEEWVKNKALREQRRLELEAEHCTFRPSLGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSTRQRASRRASGGV----GPAAATAFAAREAAFQDAKKQRLEALRKEKEQLEVQEATFQPVIGAEARRA 1230          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14040.3018.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KF78_9PHAE2.160e-16454.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNB8_ECTSI3.810e-15350.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 721..748
NoneNo IPR availableCOILSCoilCoilcoord: 783..803
NoneNo IPR availableCOILSCoilCoilcoord: 539..566
NoneNo IPR availablePANTHERPTHR37028:SF4coord: 781..949
coord: 540..583
NoneNo IPR availablePANTHERPTHR37028FAMILY NOT NAMEDcoord: 641..756
NoneNo IPR availablePANTHERPTHR37028:SF4coord: 641..756
NoneNo IPR availablePANTHERPTHR37028FAMILY NOT NAMEDcoord: 781..949
coord: 540..583

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14040contigL-elsbetiae_contig14040:164..4046 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14040.3018.1mRNA_L-elsbetiae_contig14040.3018.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14040 164..4046 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14040.3018.1 ID=prot_L-elsbetiae_contig14040.3018.1|Name=mRNA_L-elsbetiae_contig14040.3018.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1042bp
PVTATEPDPPIAEEAGGQPEPASDSGPDVNPEVAAGVSAPDDSEKIDTVA
RVSAETDSPIAGEAAGQPEPASDSGPDVNPEVAAGVSASDDSGNVDTVAP
VSAERDSPTAGEAAGQPEPASDSGPDVNPEVAAGVSAPDDSGKVDTVPPV
SAEPDSLIAGEAAGQPEPASDSGPDVSPDDSKKPSSGAAPPLPPSSSQQQ
DAAAPAAEAASEAEAAAPAAAGAAAAAPAGEEAEAKKAPTAAPAPAPSPK
VDGSNVAASKAKAALAAAKSRTRSIQQAAASSPAGATPQQRQPRRRGPIS
DRKAAPVARGVSPGRKPPSPARRGRQAAQRLSASATPVRVSPGAGEVSRA
TPAVSVTPGLHPLPLPPPPLASNAVEPSPQRHRAESPARQKRGVSPAGSV
TPARAAASPPARVMTPASAEASGNRLHEQAREARERLERRRTEGGASPPP
PFLSAPAPAPLTPLPGAGLTLTPASAEASGNRLHGQARETRERLERRRKE
GVAASPLLAGPGLMPFAPRRWSTPRPPGPGANVPSVTGLERLESLYRDAI
QRNSRLEMARRAEEEKPRDCTFTPEISRRGRSLVRVASGDSFGASAGGAG
GAGKGGGLWDTFEVLYEDAKRRREKIEALKGAQELMTRPPSPLITAMGRQ
VVRDPIDVRMKLEAERWARRWEELEEKKIQREEDGCTFMPDFTIGRRSSS
APRLRPGRSDPGGPGGIEAFMERSARFLETRERNIEKLKQEADERELAET
TFKPRILPWGGGGGDETASAGAGSSVAGGEDVFERLLRAAENQEMNKAAL
KQEFLLREQELYNNFEPRLTTRQSEGPTTPLEDRIKNSTEEWLKSKALRE
QRRRELEAEPCTFRPSLAAGAGAGQRRSSSVDPRARARSSRPSSTAPSSR
RGSAAASAFSAREAVFQESKAQRLDALPKEKERLELQEATFQPVLGAEGR
GAGGGGGGARGGVSSDGGSGGPGATGGALSGAAESKAAPRGALGRKDPVG
FKSQGSAPARSRESSTTTATSGQQLRLPEGAKAVVPVAAAAA
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