prot_L-elsbetiae_contig1403.3010.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1403.3010.1
Unique Nameprot_L-elsbetiae_contig1403.3010.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length807
Homology
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: D7FQK7_ECTSI (Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQK7_ECTSI)

HSP 1 Score: 373 bits (958), Expect = 1.610e-114
Identity = 341/564 (60.46%), Postives = 364/564 (64.54%), Query Frame = 0
Query:    1 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGT---LHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPESLPAALL-AP-AGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAFSEMGGGEGADDGSAKAAAPESALSEGAAAALAAWRGNPTPAPGRSA-AAKKKQLSAQGNNLTKYWGAPVSSSK---KSRAGGATGGRGDGD-GGMAADRSFEFATPDRPSCGVTAFSGGEGGTAQTAAAGRPDADLPAQRFDPDKASPASLPSCVSPGSFYTGVSESPSSPAATPGHATSDHVGATRDGKENQAPLS---PLDDGPSEEAGGLTATSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXSRLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGHDSSGPD-PWGA-EYAYPRPDDASRETAGGDQGRRPAGAGAGSSGPDDAPAAPSSGGCRRRLKRRRTLGVGSLGPGGMIRGLEGTARRGLGGPGRRSKSLG 549
            MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHK+A  +      + LPKILRAVKFDS G+FPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPE LP+A+  AP A  D  G    DRAAALAFLGPPV QERGCAVADGDVDPITGE FSEMGG  G  DG   A  PESA+SE AAAALAAWRG   PAPG    A K K+LSAQGNNLTKYWGAP+ S K   K   GG   GRG  + GG   D     ATPDRP   V  F GG    ++T            ++ DPD+ASPA  P+CVSPGSFY GVS SP     T   A+S  V    D KENQ PLS   PL+D PS                        XXXXXXXXXXXXXXXXXXXXXXXXXXX X   XXXXXXXXXXXXXXXXXXXXXXXXXXXX          GH+ +G   PWGA  YAYPR D   +ETA        A AGA   G                LKRRRTLG+GS+ P GMIRGLEG          RRSKSLG
Sbjct:  208 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKEASAIAANPAIIWLPKILRAVKFDSAGSFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPEILPSAITTAPSAANDGMGPRDLDRAAALAFLGPPVEQERGCAVADGDVDPITGETFSEMGGRGGGKDG---AKTPESAMSEAAAAALAAWRGGSVPAPGXXXXAGKTKKLSAQGNNLTKYWGAPLPSKKSGAKRFGGGVAAGRGGFELGGAGGDGG---ATPDRPPR-VAGFRGGGAAASRTLE----------KKLDPDRASPAQSPACVSPGSFYAGVSPSPXXXXXT---ASSGEVNGCED-KENQDPLSMPPPLEDNPS-----------------------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSALCGGVGGGHNDTGDTGPWGAAHYAYPRLD-VPQETA--------AVAGATGLGXXXXXXXXXXXXXXXXLKRRRTLGLGSVAPSGMIRGLEGVGXXXXXXXXRRSKSLG 718          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: K3WYL4_GLOUD (Exonuclease 1 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYL4_GLOUD)

HSP 1 Score: 112 bits (281), Expect = 2.900e-23
Identity = 61/145 (42.07%), Postives = 85/145 (58.62%), Query Frame = 0
Query:   12 LCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAF 156
            +C  SGCDYLPS+ G GLKKAY  + +H             KI+RA++ +     P  YEA+F++ALLTFRHQR +DP +R +V +TP+P+                +  AD  AA+ FLGP + Q+   A+A+GD+DPIT E F
Sbjct:  209 MCIFSGCDYLPSLPGFGLKKAYTALKQHGS---------FAKIIRALRLEGKVRIPPTYEAEFEKALLTFRHQRVYDPKARQIVPLTPIPDR---------------SLAADEDAAMEFLGPMLPQDIAQAIAEGDMDPITMECF 329          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A8K1FJT1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJT1_PYTOL)

HSP 1 Score: 109 bits (272), Expect = 5.680e-21
Identity = 57/152 (37.50%), Postives = 89/152 (58.55%), Query Frame = 0
Query:    5 NEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAF 156
            ++D  + +C  SGCDYLPS+ G+GLKKAY ++ +H           + K++RAV+ +        YEA+F+RA LTFRHQR +DP ++ +V +TP+P  L                  ++ AA+ FLGP ++ +   A+A+GD+DPIT + F
Sbjct:  216 SDDMFLEMCIFSGCDYLPSLPGIGLKKAYSLLKQHGS---------VSKMIRAVRLEGKTRVTSTYEAEFERAFLTFRHQRVYDPRTKKIVPLTPIPSEL-----------------LEKDAAMEFLGPDLSDDIAQAIAEGDMDPITKDRF 341          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A5D6Y0X9_9STRA (Exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0X9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.050e-20
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 0
Query:   10 MTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAF 156
            + +C  SGCDYLPS+ G GLKKAY  + +H             K++R+++ +     P  YEADF+RA+LTFRHQR FDP S+ +V +TP+PES+         KD +          + FLGP ++     A+A GD+DP+T E F
Sbjct:  219 LEMCIFSGCDYLPSLPGFGLKKAYVALKQHGS---------FAKVIRSLRLEGKVRIPPTYEADFERAVLTFRHQRVFDPRSQQLVPLTPIPESV-------TEKDPT----------VGFLGPMLSNAVAVAIAQGDMDPVTMEMF 339          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A7S2HK77_9STRA (Exonuclease 1 (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HK77_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.840e-19
Identity = 44/89 (49.44%), Postives = 60/89 (67.42%), Query Frame = 0
Query:    1 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDP 89
            M G   D L+ +C L+GCDYLP V+G+G+KKA+ +VSRH+           P++LRA+++    + P  YE DFQRA+LTFRHQR FDP
Sbjct:   72 MEGFTTDMLLAMCILAGCDYLPQVNGIGIKKAHELVSRHRGP---------PRLLRALRYAKATSVPVTYEKDFQRAVLTFRHQRVFDP 151          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A2P4XM49_9STRA (Exonuclease 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XM49_9STRA)

HSP 1 Score: 103 bits (258), Expect = 2.830e-19
Identity = 57/149 (38.26%), Postives = 85/149 (57.05%), Query Frame = 0
Query:    8 DLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAF 156
            + + +C  SGCDYLPS+ G GLKKAY  + +H             KI+RA++ +     P  YE DF++A+LTFRHQR + P  + +V +TP+PE+L           E+ +A+        F+GP ++ E   A+ADGD+DPIT + F
Sbjct:  192 EFLEMCIFSGCDYLPSIPGFGLKKAYTSMKQHGS---------FMKIIRALRLEGKVRIPATYEDDFRKAVLTFRHQRVYCPTKKELVSLTPIPENL----------QETNSAMD-------FVGPMLSNEVAKAIADGDMDPITMKNF 314          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A8J4GEC3_9CHLO (Exonuclease 1 (Fragment) n=3 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GEC3_9CHLO)

HSP 1 Score: 104 bits (260), Expect = 3.210e-19
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    1 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLP-------ESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAF 156
            M G + D L+ +C L+GCD+LP++ G+G+KKA+ M+ +H+            K++R ++F+ G + P GYE  FQR +  FRHQR + PV+R++ H+ PLP       + L  A L   G +           AL FLGPP+  E    +A GD+DP T + F
Sbjct:  208 MAGFDHDMLLQMCILAGCDFLPNLAGVGIKKAHAMIRKHRD---------FVKVVRFLRFN-GTSLPPGYEVRFQRTIWLFRHQRVYCPVTRALTHLRPLPPGGLAAADVLVLAALPTEGPERD---------ALPFLGPPMEAEVAAGIAAGDLDPSTLQPF 351          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A835Y4F2_9CHLO (Exonuclease 1 n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y4F2_9CHLO)

HSP 1 Score: 104 bits (260), Expect = 3.430e-19
Identity = 57/163 (34.97%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    1 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPES-------LPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGEAF 156
            M G + + L+ +C ++GCD+LP++ G+G+KKA+ ++ +H+            K++RA++F+ G + P GYE  FQR L  FRHQR F P +R++ H+ PLP+        L  A + P G +            L FLGPP+  +    +ADG++DP T   F
Sbjct:  208 MTGFDHEMLLQMCIMAGCDFLPNMQGVGIKKAHALIRKHRD---------FVKVVRALRFN-GTSIPPGYEVRFQRTLWLFRHQRVFCPAARAMAHLRPLPQGGLGAANVLVLAAIPPEGAEREE---------LPFLGPPMDPQIVAGIADGEIDPNTMRPF 351          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: D8TZ58_VOLCA (Exonuclease 1 n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TZ58_VOLCA)

HSP 1 Score: 100 bits (248), Expect = 5.170e-19
Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 0
Query:    1 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLP-------ESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADG 146
            M G N D L+ +C L+GCD+LP++ G+G+KKA+ M+ +H+            K++R + F+ G + P GYE  FQR L  FRHQR F P++R++ H+ PLP       + L  A L P G +           AL FLGPP+A E    +A G
Sbjct:  208 MAGFNHDMLLQMCILAGCDFLPNIPGVGIKKAHAMIRKHRD---------FVKVVRNLHFN-GTSPPPGYEIRFQRTLWLFRHQRVFCPIARALTHLRPLPPGGLGAADVLVLAALPPEGPERE---------ALHFLGPPMAAEVATGIAMG 341          
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Match: A0A2S5B530_9BASI (Exonuclease 1 n=1 Tax=Rhodotorula taiwanensis TaxID=741276 RepID=A0A2S5B530_9BASI)

HSP 1 Score: 103 bits (256), Expect = 7.730e-19
Identity = 58/154 (37.66%), Postives = 87/154 (56.49%), Query Frame = 0
Query:    1 MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLHLPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPLPESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDPITGE 154
            + G ++D+   +  LSGCDYL SV G+GLK A+R++ ++K+           K+++ V+ +     PR Y  DF+RA LTF HQ  FDP+++S+ H+TP+P               +GT L D    L F+GP +A +    VA GD+DPIT E
Sbjct:  213 LAGWSDDEFRHMAILSGCDYLDSVVGLGLKTAHRLLRKYKKPE---------KVIQFVRLEGNLNVPRSYLDDFRRAELTFLHQHVFDPLTKSLTHLTPIP---------------AGTTLED----LPFIGPLLAPDFALGVAQGDIDPITKE 338          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1403.3010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQK7_ECTSI1.610e-11460.46Exonuclease 1 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
K3WYL4_GLOUD2.900e-2342.07Exonuclease 1 n=1 Tax=Globisporangium ultimum (str... [more]
A0A8K1FJT1_PYTOL5.680e-2137.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y0X9_9STRA4.050e-2040.14Exonuclease 1 n=1 Tax=Pythium brassicum TaxID=1485... [more]
A0A7S2HK77_9STRA1.840e-1949.44Exonuclease 1 (Fragment) n=2 Tax=Dictyocha speculu... [more]
A0A2P4XM49_9STRA2.830e-1938.26Exonuclease 1 n=1 Tax=Phytophthora palmivora var. ... [more]
A0A8J4GEC3_9CHLO3.210e-1936.81Exonuclease 1 (Fragment) n=3 Tax=Volvox reticulife... [more]
A0A835Y4F2_9CHLO3.430e-1934.97Exonuclease 1 n=1 Tax=Edaphochlamys debaryana TaxI... [more]
D8TZ58_VOLCA5.170e-1938.56Exonuclease 1 n=1 Tax=Volvox carteri f. nagariensi... [more]
A0A2S5B530_9BASI7.730e-1937.66Exonuclease 1 n=1 Tax=Rhodotorula taiwanensis TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008918Helix-hairpin-helix motif, class 2SMARTSM00279HhH_4coord: 6..39
e-value: 2.0E-6
score: 37.3
NoneNo IPR availableGENE3D1.10.150.20coord: 4..84
e-value: 4.6E-16
score: 60.7
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081FLAP ENDONUCLEASE FAMILY MEMBERcoord: 3..210
IPR032641Exonuclease 1PANTHERPTHR11081:SF8EXONUCLEASE 1coord: 3..210
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILY478075' to 3' exonuclease, C-terminal subdomaincoord: 5..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1403contigL-elsbetiae_contig1403:280..7005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1403.3010.1mRNA_L-elsbetiae_contig1403.3010.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1403 262..7528 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1403.3010.1 ID=prot_L-elsbetiae_contig1403.3010.1|Name=mRNA_L-elsbetiae_contig1403.3010.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=807bp
MRGMNEDDLMTLCALSGCDYLPSVHGMGLKKAYRMVSRHKQARHLFGTLH
LPKILRAVKFDSGGAFPRGYEADFQRALLTFRHQRAFDPVSRSVVHMTPL
PESLPAALLAPAGKDESGTALADRAAALAFLGPPVAQERGCAVADGDVDP
ITGEAFSEMGGGEGADDGSAKAAAPESALSEGAAAALAAWRGNPTPAPGR
SAAAKKKQLSAQGNNLTKYWGAPVSSSKKSRAGGATGGRGDGDGGMAADR
SFEFATPDRPSCGVTAFSGGEGGTAQTAAAGRPDADLPAQRFDPDKASPA
SLPSCVSPGSFYTGVSESPSSPAATPGHATSDHVGATRDGKENQAPLSPL
DDGPSEEAGGLTATSKFFGGGGGGGGVGGGGDGGAGGKRLPVRRQSGLRR
RFRPPHAASRLAAQAAVSKDSTLRRSGYGSSGGGGRSGGDQANQDDDDHG
HDSSGPDPWGAEYAYPRPDDASRETAGGDQGRRPAGAGAGSSGPDDAPAA
PSSGGCRRRLKRRRTLGVGSLGPGGMIRGLEGTARRGLGGPGRRSKSLGA
APGDASSDVSTAAAYDNNGSDVNDDAGGRTGDGYVSNLFERFAAGVHARS
PVRNGSGGRDDDDHDQLEPRGTTAAVAATASSGGGDEATAADTEHQLAVP
DSEASEGEEETGGGDDDGVGGAHNASCLSPSPPPSSCINSRGYRVCPAGQ
QASPVDGAAGGGIFDGYRTGFVDDHGIPATAPPRELCRAANGSKRSKKSG
GAGDRKAMLLRENAATRGGGGVTAAAGRSKGRVGGGGAGVIGVTASHIFE
QFAYSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008918HhH2
IPR006084XPG/Rad2
IPR032641Exo1
IPR0362795-3_exonuclease_C_sf