prot_L-elsbetiae_contig14022.3005.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig14022.3005.1
Unique Nameprot_L-elsbetiae_contig14022.3005.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length121
Homology
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BLAST of mRNA_L-elsbetiae_contig14022.3005.1 vs. uniprot
Match: A0A6H5JJV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV6_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.870e-20
Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 0 
Query:    1 MATMSAEYGTMTEEVRQNRAQRGLHVAVVSGFLNNSRPVQESCLGLCNACRDGVPAGCIRIQDGMPPTTLSMFWPNGSNGVDDCRA--TRVMPPRRVLKVRW-IRGDAVGATDA----YPMAGATSVG 121
            MA ++ E  +  E +R +RA RGL VAVVSGF+ + R VQESCLGLCNACR+GVP   + +++ +P   L+M  PN      +     TRV+ PRRVL++ W  R  A  A        P AG  SVG
Sbjct:    1 MAAVAMENWSSEEHMR-DRALRGLQVAVVSGFMKDCRSVQESCLGLCNACREGVPVERMLVREWVPQILLAMVLPNAVQAQREAEIPPTRVLHPRRVLRLEWTFRSHAWWAESTGQVPKPSAGTPSVG 127
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BLAST of mRNA_L-elsbetiae_contig14022.3005.1 vs. uniprot
Match: A0A6H5JNP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP2_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.450e-17
Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 0 
Query:   13 EEVRQNRAQRGLHVAVVSGFLNNSRPVQESCLGLCNACRDGVPAGCIRIQDGMPPTTLSMFWPN--GSNGVDDCRATRVMPPRRVLKVRW 100
            EE  ++RA R L  AVVSGF+ + R  Q SCLGLCNACR+GVP   + I +G+P T L+M  P    +    D   TRV+ PRRVL+++W
Sbjct:   12 EEHMRDRALRALQFAVVSGFVKDYRATQASCLGLCNACREGVPVERMLIAEGVPQTRLAMVLPKVVQAQWEADIPPTRVLQPRRVLRLKW 101
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14022.3005.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JJV6_9PHAE2.870e-2044.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNP2_9PHAE1.450e-1748.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig14022contigL-elsbetiae_contig14022:3273..3635 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig14022.3005.1mRNA_L-elsbetiae_contig14022.3005.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig14022 3273..4677 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig14022.3005.1 ID=prot_L-elsbetiae_contig14022.3005.1|Name=mRNA_L-elsbetiae_contig14022.3005.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=121bp
MATMSAEYGTMTEEVRQNRAQRGLHVAVVSGFLNNSRPVQESCLGLCNAC
RDGVPAGCIRIQDGMPPTTLSMFWPNGSNGVDDCRATRVMPPRRVLKVRW
IRGDAVGATDAYPMAGATSVG
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