prot_L-elsbetiae_contig1400.2999.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1400.2999.1
Unique Nameprot_L-elsbetiae_contig1400.2999.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length155
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: D8LJ06_ECTSI (CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ06_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 8.320e-84
Identity = 138/142 (97.18%), Postives = 142/142 (100.00%), Query Frame = 0 
Query:   14 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVLADSAE 155
            MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQS+GSRDGGISVTNDGATILR+IHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAE+LVNQRLHPQTIIQGWRLATAAAR+VLADSAE
Sbjct:    1 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGGISVTNDGATILRAIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEKLVNQRLHPQTIIQGWRLATAAARRVLADSAE 142
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A836CDN2_9STRA (CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDN2_9STRA)

HSP 1 Score: 250 bits (638), Expect = 2.880e-78
Identity = 130/142 (91.55%), Postives = 137/142 (96.48%), Query Frame = 0 
Query:   14 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVLADSAE 155
            MATEAVLN+ AQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQS+GSRDG +SVTNDGATILR+IHVDNAAAKVLV+IAKTQDDEVGDGTTSVTVLCGELLREAEQLVN RLHPQTIIQGWRLATA ARKVL ++AE
Sbjct:    1 MATEAVLNEQAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSMGSRDGSVSVTNDGATILRAIHVDNAAAKVLVDIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNARLHPQTIIQGWRLATAIARKVLVEAAE 142
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A7S2R4B7_9STRA (CCT-beta n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R4B7_9STRA)

HSP 1 Score: 221 bits (564), Expect = 4.440e-67
Identity = 112/142 (78.87%), Postives = 127/142 (89.44%), Query Frame = 0 
Query:    9 PYRTAMATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVL 150
            P R  M+ EAVLN  AQVDKG+NAR+SSFVGAIA+ADLVK+TLGPKGMDKIL SV S DGGI++TNDGATIL+SI+VDNAAAKVLV+IAK QDDEVGDGTTSVTVLCGELLREAE+L+NQR+HPQT+I+GWR A   ARK L
Sbjct:   11 PPRPTMSAEAVLNAEAQVDKGENARMSSFVGAIAVADLVKSTLGPKGMDKILSSVSSPDGGITITNDGATILKSIYVDNAAAKVLVDIAKVQDDEVGDGTTSVTVLCGELLREAEKLINQRIHPQTVIEGWRKAANIARKTL 152
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A7R9UEE6_9STRA (CCT-beta (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEE6_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.350e-65
Identity = 112/142 (78.87%), Postives = 124/142 (87.32%), Query Frame = 0 
Query:   14 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGG-ISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVLADSA 154
            MATE VLN+ A +DKG+NARLSSFVGAIAIADLVKTTLGPKGMDKILQSVG  +   ++VTNDGATILRSIHV N AAK+LV IAKTQDDE+GDGTTSVTVLCGELLR+AE LVNQR+HPQTII+GWRLA   AR+ L  SA
Sbjct:    1 MATEMVLNEGASIDKGENARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGDPNNQTVTVTNDGATILRSIHVANPAAKILVEIAKTQDDEIGDGTTSVTVLCGELLRQAETLVNQRIHPQTIIEGWRLARTVARQALESSA 142
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A7S2DLH1_9STRA (CCT-beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLH1_9STRA)

HSP 1 Score: 215 bits (548), Expect = 7.430e-65
Identity = 109/137 (79.56%), Postives = 122/137 (89.05%), Query Frame = 0 
Query:   14 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVL 150
            M+ EAVLN  AQVDKG+NAR+SSF+GAIA+ADLVK+TLGPKGMDKIL SVGS  G I++TNDGATILRSIHVDNAAAKVLV+IAK QDDEVGDGTTSV VLCGELLREAE L+ QR+HPQTII+GWR+AT  AR  L
Sbjct:    1 MSAEAVLNAEAQVDKGENARMSSFIGAIAVADLVKSTLGPKGMDKILTSVGSEGGNITITNDGATILRSIHVDNAAAKVLVDIAKVQDDEVGDGTTSVAVLCGELLREAESLIQQRIHPQTIIEGWRMATNIARAEL 137
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A6V1SR55_HETAK (CCT-beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1SR55_HETAK)

HSP 1 Score: 212 bits (540), Expect = 1.120e-63
Identity = 108/137 (78.83%), Postives = 119/137 (86.86%), Query Frame = 0 
Query:   14 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVL 150
            MATEAVLND A V+KGDNAR+ SFVGAIAI D+VKTTLGPKGMDKIL SV + D  ISVTNDGATIL+S+HVDNAAAKVL++IAKTQDDEVGDGTTSV VLCGELLREAE L+N R+HPQT+I GWR A   AR VL
Sbjct:    1 MATEAVLNDQASVEKGDNARMMSFVGAIAICDMVKTTLGPKGMDKILVSVSAHDKSISVTNDGATILKSVHVDNAAAKVLIDIAKTQDDEVGDGTTSVAVLCGELLREAEALINARIHPQTVIHGWRKAAQIARGVL 137
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: I2CP43_NANGC (CCT-beta n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP43_NANGC)

HSP 1 Score: 212 bits (540), Expect = 1.120e-63
Identity = 111/143 (77.62%), Postives = 124/143 (86.71%), Query Frame = 0 
Query:   14 MATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLV-NQRLHPQTIIQGWRLATAAARKVLADSAE 155
            M+   VLN  A+VDKG+NAR+SSF+GAIAIADLVKTTLGPKGMDKILQSVGS +G I+VTNDGATIL+S+H+DN AAKVLV+IAKTQDDEVGDGTTSV VLCGELLREAE L+ NQRLHPQT+ QGWR AT  ARK L   AE
Sbjct:    1 MSYAGVLNAGAEVDKGENARMSSFIGAIAIADLVKTTLGPKGMDKILQSVGSSEGAITVTNDGATILKSVHIDNPAAKVLVDIAKTQDDEVGDGTTSVAVLCGELLREAESLLSNQRLHPQTVAQGWREATILARKALEGLAE 143
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A6G0XN95_9STRA (CCT-beta n=10 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0XN95_9STRA)

HSP 1 Score: 210 bits (534), Expect = 8.670e-63
Identity = 106/137 (77.37%), Postives = 123/137 (89.78%), Query Frame = 0 
Query:   19 VLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVLADSAE 155
            VLN  +QV+KG+NARL+SFVGAIAIAD+VKTTLGPKGMDKILQSVG  D  ISVTNDGATIL+S+++DNAAAKVLV+IAKTQDDEVGDGTTSV VLCGELLREAE+L++QR+HPQTII GWR+A + A   L DSA+
Sbjct:    6 VLNPESQVEKGENARLASFVGAIAIADMVKTTLGPKGMDKILQSVGGPDKSISVTNDGATILKSVYIDNAAAKVLVDIAKTQDDEVGDGTTSVAVLCGELLREAEKLIDQRIHPQTIIDGWRIALSTAHMALEDSAK 142
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: K3WY33_GLOUD (CCT-beta n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WY33_GLOUD)

HSP 1 Score: 208 bits (529), Expect = 4.880e-62
Identity = 105/139 (75.54%), Postives = 125/139 (89.93%), Query Frame = 0 
Query:   17 EAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVLADSAE 155
            +AVL+  +QV+KG+NAR+SSFVGAIAIAD+VKTTLGPKGMDKILQS+G  D  ISVTNDGATILRS++VDNAAAKVLV+IAKTQD+EVGDGTTSV VLCGELLREAE+L++QR+HPQTII GWR+A + A + L  SA+
Sbjct:    3 QAVLDPESQVEKGENARMSSFVGAIAIADMVKTTLGPKGMDKILQSMGGPDKSISVTNDGATILRSVYVDNAAAKVLVDIAKTQDEEVGDGTTSVAVLCGELLREAEKLIDQRIHPQTIIDGWRIALSTAHEALVKSAK 141
[Close]
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Match: A0A7S2RXR6_9STRA (CCT-beta n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RXR6_9STRA)

HSP 1 Score: 207 bits (528), Expect = 6.860e-62
Identity = 105/138 (76.09%), Postives = 119/138 (86.23%), Query Frame = 0 
Query:   17 EAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTTLGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQDDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVLADSA 154
            +A L+    VDKG+NARLSSFVGAIAIAD+VKTTLGPKGMDKILQ +   D GISVTNDGATILRS+ +DNAAAKVLV+IA+ QDDEVGDGTTSV VLCGELLREAEQLVNQR+HPQTI+ GWR+A   ARK L ++A
Sbjct:    3 QAFLDQGTSVDKGENARLSSFVGAIAIADMVKTTLGPKGMDKILQKISEHDQGISVTNDGATILRSVMLDNAAAKVLVDIARVQDDEVGDGTTSVAVLCGELLREAEQLVNQRIHPQTIVAGWRIARGVARKALEEAA 140
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1400.2999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ06_ECTSI8.320e-8497.18CCT-beta n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A836CDN2_9STRA2.880e-7891.55CCT-beta n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
A0A7S2R4B7_9STRA4.440e-6778.87CCT-beta n=2 Tax=Rhizochromulina marina TaxID=1034... [more]
A0A7R9UEE6_9STRA2.350e-6578.87CCT-beta (Fragment) n=1 Tax=Pinguiococcus pyrenoid... [more]
A0A7S2DLH1_9STRA7.430e-6579.56CCT-beta n=1 Tax=Dictyocha speculum TaxID=35687 Re... [more]
A0A6V1SR55_HETAK1.120e-6378.83CCT-beta n=1 Tax=Heterosigma akashiwo TaxID=2829 R... [more]
I2CP43_NANGC1.120e-6377.62CCT-beta n=1 Tax=Nannochloropsis gaditana (strain ... [more]
A0A6G0XN95_9STRA8.670e-6377.37CCT-beta n=10 Tax=Saprolegniaceae TaxID=4764 RepID... [more]
K3WY33_GLOUD4.880e-6275.54CCT-beta n=3 Tax=Pythiaceae TaxID=4782 RepID=K3WY3... [more]
A0A7S2RXR6_9STRA6.860e-6276.09CCT-beta n=1 Tax=Eucampia antarctica TaxID=49252 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017998Chaperone tailless complex polypeptide 1 (TCP-1)PRINTSPR00304TCOMPLEXTCP1coord: 70..88
score: 36.53
coord: 100..119
score: 53.46
coord: 45..61
score: 53.94
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 10..155
e-value: 1.2E-53
score: 183.8
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 25..152
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 43..151
e-value: 3.1E-41
score: 141.5
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 17..154
IPR012716T-complex protein 1, beta subunitPANTHERPTHR11353:SF23T-COMPLEX PROTEIN 1 SUBUNIT BETAcoord: 17..154
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00750TCP1_1coord: 48..60
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00751TCP1_2coord: 72..88
IPR002194Chaperonin TCP-1, conserved sitePROSITEPS00995TCP1_3coord: 100..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1400contigL-elsbetiae_contig1400:21620..26044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1400.2999.1mRNA_L-elsbetiae_contig1400.2999.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1400 21620..26044 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1400.2999.1 ID=prot_L-elsbetiae_contig1400.2999.1|Name=mRNA_L-elsbetiae_contig1400.2999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=155bp
RYSPPAILPYRTAMATEAVLNDNAQVDKGDNARLSSFVGAIAIADLVKTT
LGPKGMDKILQSVGSRDGGISVTNDGATILRSIHVDNAAAKVLVNIAKTQ
DDEVGDGTTSVTVLCGELLREAEQLVNQRLHPQTIIQGWRLATAAARKVL
ADSAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017998Chaperone_TCP-1
IPR027413GROEL-like_equatorial_sf
IPR002423Cpn60/TCP-1
IPR012716Chap_CCT_beta
IPR002194Chaperonin_TCP-1_CS