mRNA_L-elsbetiae_contig14.2985.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: D7FVR2_ECTSI (ARL6, ARF-like Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVR2_ECTSI) HSP 1 Score: 269 bits (688), Expect = 3.910e-90 Identity = 127/147 (86.39%), Postives = 138/147 (93.88%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQSTAGRRGITEKRRSSGSSHK 441 FAKNNLNFTV DMSGQSRYRTLWEHYFC+VHA+IFVVDSTDR+RMCVAKEELEEVL+H+EV+NSGMPILVYANKGDLPGS+S QECADELGL+GLN+EQTPWHIE+SNAL G GVEEGVNWLVQTLQS +GRR TE RRSSGS HK Sbjct: 58 FAKNNLNFTVIDMSGQSRYRTLWEHYFCNVHAVIFVVDSTDRVRMCVAKEELEEVLKHDEVQNSGMPILVYANKGDLPGSMSRQECADELGLSGLNDEQTPWHIEKSNALVGLGVEEGVNWLVQTLQSASGRRETTEGRRSSGSGHK 204
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A6S9ITP1_HETAK (ADP-ribosylation factor-like protein 6 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9ITP1_HETAK) HSP 1 Score: 175 bits (443), Expect = 5.830e-53 Identity = 76/128 (59.38%), Postives = 104/128 (81.25%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQS 384 F+KN+LNFT+FDMSGQ+RYR+LWEHY+ DV A+IFV+DSTDRIRMCVAK+EL+ L H ++++ +PIL +ANK DLPG+++P +C EL L + ++ PWHI SNAL+G GV+EG+NWL + LQ+ Sbjct: 71 FSKNSLNFTIFDMSGQARYRSLWEHYYRDVEAVIFVLDSTDRIRMCVAKDELDSFLGHEDIQSKNVPILFFANKMDLPGAVNPVDCMQELELENIGDK--PWHIASSNALSGEGVDEGINWLCEQLQN 196
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A7S2V202_9STRA (ADP-ribosylation factor-like protein 6 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V202_9STRA) HSP 1 Score: 174 bits (442), Expect = 5.890e-53 Identity = 77/132 (58.33%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQSTAGR 396 F+KNNLNFT+FDMSGQ+RYR+LWEHY+ DV AI+FV+DSTDRIR+CVAK+ELE ++ H +V ++ +PIL +ANK DLPG+++P +C EL L + ++ PWHI SNAL G GV+EG+ WL L S G+ Sbjct: 58 FSKNNLNFTIFDMSGQARYRSLWEHYYRDVQAIMFVLDSTDRIRLCVAKDELETMMAHEDVSSTNIPILFFANKMDLPGAMTPLDCMQELELENVGDK--PWHITASNALTGEGVDEGITWLADHLSSKGGK 187
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A835YUJ0_9STRA (ADP-ribosylation factor family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ0_9STRA) HSP 1 Score: 168 bits (425), Expect = 2.100e-50 Identity = 76/127 (59.84%), Postives = 100/127 (78.74%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQ 381 FAK+NLNFT+FDMSGQSRYR LW HY+ +V AIIFV+D T+R+RMCVAKEEL+E+L H +V NS PIL++ANK DLPG+LS +C ++L L ++N+ PW IE SNAL G G++ G+ WL + L+ Sbjct: 58 FAKDNLNFTIFDMSGQSRYRELWGHYYREVQAIIFVLDCTERVRMCVAKEELDELLTHPDVSNSCTPILIFANKMDLPGALSAVDCMEQLDLQRISNK--PWQIEASNALTGEGIDRGLEWLAEKLR 182
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A7S3H1V6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H1V6_9STRA) HSP 1 Score: 164 bits (415), Expect = 7.360e-49 Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWL 366 F+KNN+NFTV+DMSGQ RYR LWEHY+ DV AIIFV+DSTDR+RMCVAKEEL+++L H E+K + PI+ +ANK D+ GS+ P EC +ELGL + ++ W I SNAL+G GV+ G+ WL Sbjct: 57 FSKNNVNFTVYDMSGQGRYRNLWEHYYSDVEAIIFVLDSTDRLRMCVAKEELDQLLAHEEIKKTAAPIVFFANKRDVAGSMGPDECTEELGLDRIRDKA--WSIWPSNALSGEGVDAGIEWL 176
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A485KFA7_9STRA (Aste57867_3371 protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485KFA7_9STRA) HSP 1 Score: 161 bits (408), Expect = 8.480e-48 Identity = 77/133 (57.89%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQSTAGRR 399 F K NL+FTVFDMSGQSRYR+LWE+Y+ DV AIIFV+DSTD IRMCVAK+ELE++L+H ++ + +PIL +ANK DL SL+P EC +L L L+ WHI SNA+ G GVEEG+ WL L T R+ Sbjct: 58 FTKYNLSFTVFDMSGQSRYRSLWENYYSDVQAIIFVMDSTDTIRMCVAKDELEQILQHKDLSSKKIPILFFANKMDLAHSLTPVECMGQLELDKLSKT---WHITASNAITGHGVEEGIQWLADQLGKTKSRK 187
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A6A3WUL2_9STRA (ADP-ribosylation factor-like protein 6 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WUL2_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.760e-47 Identity = 75/133 (56.39%), Postives = 95/133 (71.43%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQSTAGRR 399 F K+NLNFTVFDMSGQSRYR LWE+Y+ DV AII+V+DSTD IRMCVAK+ELE+++ H E+ + +PIL +ANK DLP +L+P EC L L L ++ WHI SNA+ G GVEEG+ WL R+ Sbjct: 58 FTKSNLNFTVFDMSGQSRYRNLWENYYSDVQAIIYVLDSTDTIRMCVAKDELEQLVEHKELASKKVPILFFANKMDLPNALTPVECMQMLELDSLGSKS--WHITASNAVTGRGVEEGIEWLADQFAKGKSRK 188
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A067CAA2_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CAA2_SAPPC) HSP 1 Score: 160 bits (406), Expect = 1.760e-47 Identity = 77/133 (57.89%), Postives = 97/133 (72.93%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTLQSTAGRR 399 FAK+NL+FTVFDMSGQSRYR+LWE+Y+ DV AIIFV+DSTD IRMCV K+ELE++L H ++ +PIL +ANK DL SL+P EC +L L L N+ WHI SNA+ G GV+EG+ WL L S R+ Sbjct: 58 FAKHNLSFTVFDMSGQSRYRSLWENYYQDVQAIIFVMDSTDTIRMCVVKDELEQILAHKDLAPKKIPILFFANKMDLAHSLTPVECMGQLELEKLTNKT--WHITASNAITGRGVDEGIQWLADQLGSAKSRK 188
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: A0A7S2VZV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2VZV4_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.040e-47 Identity = 73/126 (57.94%), Postives = 96/126 (76.19%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLVQTL 378 F K+N+N TVFDMSGQSRYR+LWEHY+ +V AIIFV+DS DR+RMCVAK+EL +L H E + +PIL YANK DLPG++ P E +EL L + N+ PWHI ++AL+G+G+EEG+ WLV + Sbjct: 56 FTKSNVNLTVFDMSGQSRYRSLWEHYYLEVQAIIFVLDSADRVRMCVAKDELCSLLGHREFQGRPIPILFYANKMDLPGAMEPVEIVEELELHTIENQ--PWHIMHTDALSGTGIEEGLRWLVDAV 179
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Match: H3G5F9_PHYRM (ADP-ribosylation factor-like protein 6 n=21 Tax=Phytophthora TaxID=4783 RepID=H3G5F9_PHYRM) HSP 1 Score: 159 bits (402), Expect = 5.740e-47 Identity = 73/123 (59.35%), Postives = 94/123 (76.42%), Query Frame = 1 Query: 1 FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEELEEVLRHNEVKNSGMPILVYANKGDLPGSLSPQECADELGLTGLNNEQTPWHIERSNALAGSGVEEGVNWLV 369 F K+NLNFTVFDMSGQSRYR+LWE+Y+ DV AII+V+DSTD IRMCVAK+ELE+++ H E+ + +PIL +ANK DLP +++P EC L L L ++ WHI SNA+ G GVEEG+ WL Sbjct: 58 FTKSNLNFTVFDMSGQSRYRSLWENYYSDVQAIIYVLDSTDTIRMCVAKDELEQLVEHKELASKKVPILFFANKMDLPNAITPVECMQLLELDSLGSKS--WHITASNAVTGRGVEEGIEWLA 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig14.2985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig14.2985.1 >prot_L-elsbetiae_contig14.2985.1 ID=prot_L-elsbetiae_contig14.2985.1|Name=mRNA_L-elsbetiae_contig14.2985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp FAKNNLNFTVFDMSGQSRYRTLWEHYFCDVHAIIFVVDSTDRIRMCVAKEback to top mRNA from alignment at L-elsbetiae_contig14:26229..28355- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig14.2985.1 ID=mRNA_L-elsbetiae_contig14.2985.1|Name=mRNA_L-elsbetiae_contig14.2985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2127bp|location=Sequence derived from alignment at L-elsbetiae_contig14:26229..28355- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig14:26229..28355- >mRNA_L-elsbetiae_contig14.2985.1 ID=mRNA_L-elsbetiae_contig14.2985.1|Name=mRNA_L-elsbetiae_contig14.2985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=888bp|location=Sequence derived from alignment at L-elsbetiae_contig14:26229..28355- (Laminarionema elsbetiae ELsaHSoW15)back to top |