mRNA_L-elsbetiae_contig13992.2981.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13992.2981.1
Unique NamemRNA_L-elsbetiae_contig13992.2981.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: D7G4Q1_ECTSI (DNA repair protein RAD51 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4Q1_ECTSI)

HSP 1 Score: 447 bits (1150), Expect = 7.260e-157
Identity = 223/231 (96.54%), Postives = 229/231 (99.13%), Query Frame = 1 
Query:    7 QVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            +VVA+FHHITELEAHGINRNDVQRLSEAGYCTVESI+HCT+RKLVEVKGISEQKA KLKETVYKLVPIGFTTA+QHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQ+PLD GGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ
Sbjct:   22 EVVASFHHITELEAHGINRNDVQRLSEAGYCTVESISHCTIRKLVEVKGISEQKAAKLKETVYKLVPIGFTTASQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQMPLDAGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 252
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A836CHV0_9STRA (DNA repair and recombination protein Rad51A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHV0_9STRA)

HSP 1 Score: 382 bits (981), Expect = 6.930e-131
Identity = 194/249 (77.91%), Postives = 211/249 (84.74%), Query Frame = 1 
Query:    7 QVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTE------------------VFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            +V A FHHIT LE+HG+N+ D+ RL+++G CTVE++AH T+R+L EVKGISEQ+A KLKE  YKLVPIGFTTA QHL QRQDLITLTTGSKELDKLL GGIETGSLTE                  VFGEFRTGKTQLCHTLCV CQLPLD GGGEGKAMYIDTE TFRPQRL AIA+R+GLN DDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLV+DSATAL+RTDY GRGELSERQMQLAQ
Sbjct:   22 EVSACFHHITTLESHGVNKTDIARLADSGLCTVEAVAHATMRRLTEVKGISEQRAIKLKEIAYKLVPIGFTTANQHLQQRQDLITLTTGSKELDKLLAGGIETGSLTELHRRHLLTHAARTPRAPQVFGEFRTGKTQLCHTLCVTCQLPLDLGGGEGKAMYIDTESTFRPQRLAAIAQRYGLNADDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVVDSATALFRTDYSGRGELSERQMQLAQ 270
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: W7TKJ9_9STRA (DNA repair protein RAD51 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKJ9_9STRA)

HSP 1 Score: 369 bits (946), Expect = 2.310e-125
Identity = 181/231 (78.35%), Postives = 204/231 (88.31%), Query Frame = 1 
Query:    7 QVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            +VV  F HITELE HG+NR D+ +L EAGYCTVESI H T+RKL ++KGIS+QKA K+KE  YKLVP+GF TA Q L  R+DLI L+TGSK+LD LL GG+ETGSLTE+FGEFRTGKTQLCHTLCV  QLP+D GGGEGKAMYIDTEGTFRPQRL AIAERFGL+ D VL+NVA+ARAHNSEQQMDLLKMASAMM+EDRYAL+V+DSATAL+RTDYCGRGELSERQMQLAQ
Sbjct:   54 EVVVNFRHITELEHHGVNRTDLTKLMEAGYCTVESITHATLRKLTDIKGISDQKAQKIKEIAYKLVPMGFLTAAQQLETRKDLIQLSTGSKDLDALLGGGVETGSLTEIFGEFRTGKTQLCHTLCVTSQLPMDQGGGEGKAMYIDTEGTFRPQRLVAIAERFGLDVDTVLDNVAFARAHNSEQQMDLLKMASAMMSEDRYALVVVDSATALFRTDYCGRGELSERQMQLAQ 284
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A7S1UHL6_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHL6_9STRA)

HSP 1 Score: 365 bits (937), Expect = 1.040e-123
Identity = 174/226 (76.99%), Postives = 204/226 (90.27%), Query Frame = 1 
Query:   22 FHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            FHHITELE HG+NRND+ +L +AGYCT+ESIA  T+R+L EVKG+S+ KA KLK+  YK+ P+GF +ATQHL QR D+I+L+TGS+ELD+LL+GGIETGSLTEVFGEFRTGKTQLCHTLCV CQLPLD GGGEG+A+YIDTEGTFRP +L+AIAERFGLN DDVL+NVAYARA NSEQQ +LL+M+SAMMAEDRYALLV+DSATAL+RTDY GRGELSERQM +AQ
Sbjct:   79 FHHITELENHGVNRNDISKLMDAGYCTIESIAAATMRRLTEVKGVSDNKAQKLKDVAYKICPMGFISATQHLAQRADVISLSTGSRELDQLLQGGIETGSLTEVFGEFRTGKTQLCHTLCVTCQLPLDQGGGEGRALYIDTEGTFRPDKLSAIAERFGLNADDVLDNVAYARAQNSEQQTELLRMSSAMMAEDRYALLVVDSATALFRTDYTGRGELSERQMAMAQ 304
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A6S8RTG3_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8RTG3_9STRA)

HSP 1 Score: 338 bits (868), Expect = 6.120e-114
Identity = 164/231 (71.00%), Postives = 198/231 (85.71%), Query Frame = 1 
Query:    7 QVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            +  +A+ H++ELE HGINR D ++L+ AG+CTV+SIA+ T++ L +VKG+S+ KA KL+E  YK+VP  FTTA   L QRQ+++ L+TGSKELDKLLEGGIETGSLTE++GEFRTGKTQLCHTLCV  QLPLD GGGEGKAMYIDTEGTFRPQRL AIAER+G+  + VLENV YARAHNSEQQ +LLK A ++M+EDR++LLV+DSATALYRTDY GRGELSERQMQLAQ
Sbjct:   25 EAYSAYCHVSELEQHGINRKDTEKLASAGFCTVQSIAYATLKSLCQVKGVSDAKAQKLREIAYKIVPSTFTTAAAELEQRQNMVQLSTGSKELDKLLEGGIETGSLTELYGEFRTGKTQLCHTLCVTAQLPLDQGGGEGKAMYIDTEGTFRPQRLVAIAERYGVAAEMVLENVVYARAHNSEQQKELLKQACSLMSEDRFSLLVVDSATALYRTDYMGRGELSERQMQLAQ 255
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A7S2FUQ7_9STRA (DNA repair protein RAD51 homolog n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUQ7_9STRA)

HSP 1 Score: 332 bits (851), Expect = 2.940e-111
Identity = 160/229 (69.87%), Postives = 194/229 (84.72%), Query Frame = 1 
Query:   13 VAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            + ++ HI+ELEAHGI  +D  +L EAG+CTVESIAH ++RKL EVKGISE KA KL++   KLVP GF TA Q L +R+++I ++TGS  LD+LL+GGIETGSLTE+FGEFRTGKTQLCHTLCV CQLPLD GGGEGKAMYIDTEG FRP RL AIAER+G++ + VL+NV +ARAHNSEQQM+LLK A+A+M+EDR+ LL++DSATAL+RTDY GRGELSERQ QL Q
Sbjct:   33 IQSYRHISELEAHGIAHSDTTKLGEAGFCTVESIAHASLRKLQEVKGISEGKAQKLRDIAMKLVPCGFQTAAQELQRREEIIMISTGSSALDELLQGGIETGSLTEIFGEFRTGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDTEGCFRPNRLVAIAERYGVSPEGVLDNVVFARAHNSEQQMELLKQAAALMSEDRFVLLIVDSATALFRTDYVGRGELSERQAQLGQ 261
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A7S3XMC0_HETAK (DNA repair protein RAD51 homolog n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMC0_HETAK)

HSP 1 Score: 330 bits (847), Expect = 8.830e-111
Identity = 165/232 (71.12%), Postives = 194/232 (83.62%), Query Frame = 1 
Query:   16 AAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPI--GFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLD--GGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            A FHHI+EL  HG+N+ D  +L EAGY TV+++AH T RKL EVKGISEQKA K+K+  YKLVP+   F TA Q L  R D++ L+TGS ELD +L GGIETGS+TE+FGEFRTGKTQLCHTLCV CQLP+   GGG EGKAMYIDTEG+FRP+ +  +AERFGLN D+VL+N+A ARAHNSEQQM+LLK ASAMMAEDR+ALL++DSATAL+RTDYCGRGELSERQMQLAQ
Sbjct:   22 AFFHHISELLNHGVNQADCSKLQEAGYNTVQAVAHATSRKLCEVKGISEQKAAKIKDIAYKLVPMMTNFMTAKQALEGRADIMKLSTGSSELDMMLAGGIETGSMTEIFGEFRTGKTQLCHTLCVTCQLPVAEIGGGAEGKAMYIDTEGSFRPENIVKVAERFGLNADEVLDNIACARAHNSEQQMELLKHASAMMAEDRFALLIVDSATALFRTDYCGRGELSERQMQLAQ 253
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A1Z5KQ22_FISSO (DNA repair protein RAD51 homolog n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KQ22_FISSO)

HSP 1 Score: 323 bits (829), Expect = 4.610e-108
Identity = 163/233 (69.96%), Postives = 187/233 (80.26%), Query Frame = 1 
Query:    1 LRQVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            + ++  A+  +  L+ HGI   D+ +L  AGY TVESIAH TVRKL EVKGISE K  KLKE    +VP+ F TA   L  R+ L+TLTTGS ELDKLLEGGIETGS+TEVFGEFRTGKTQLCHTLC+ CQ+ +  GG EGKA+YIDTEGTFRP RL AIAERFGL+    LENVAYARAHNSE QM+LLKMA+A+MA+DRYALLV+DSATALYRTDY GRGELSERQMQ+AQ
Sbjct:   20 MMEIAVAYQTLEALQEHGIAAGDIAKLQAAGYHTVESIAHATVRKLTEVKGISEAKVMKLKELTKSMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSITEVFGEFRTGKTQLCHTLCITCQMAITDGGAEGKAIYIDTEGTFRPARLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMAQDRYALLVVDSATALYRTDYTGRGELSERQMQMAQ 252
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: A0A7S2EBM1_TRICV (DNA repair protein RAD51 homolog n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBM1_TRICV)

HSP 1 Score: 322 bits (826), Expect = 1.500e-107
Identity = 163/231 (70.56%), Postives = 190/231 (82.25%), Query Frame = 1 
Query:    7 QVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLAQ 699
            ++  A+  +  L+ HGI  ND+Q+L++AGY TVESIAH T RKL EVKGISE K TKLK+ V  +VP+ F TA   L  R+ L+TLTTGS ELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTL V CQ+ +  GG EGKA+YIDTEGTFRP+RL AIAERFGL+    LENVAYARAHNSE QM+LLKMA+A+M++DRYAL+V+DSATALYRTDY GRGELSERQM +AQ
Sbjct:   26 EISVAYQTLDVLQEHGIAANDIQKLNDAGYHTVESIAHATARKLSEVKGISEAKVTKLKDIVKAMVPMDFKTAADALEDRKSLVTLTTGSVELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLAVTCQMSVTEGGAEGKAIYIDTEGTFRPERLQAIAERFGLDPAVALENVAYARAHNSEHQMELLKMAAAIMSQDRYALIVVDSATALYRTDYTGRGELSERQMHMAQ 256
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BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Match: L8H3I3_ACACA (DNA repair protein RAD51 homolog n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H3I3_ACACA)

HSP 1 Score: 321 bits (822), Expect = 5.150e-107
Identity = 158/222 (71.17%), Postives = 186/222 (83.78%), Query Frame = 1 
Query:   31 ITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVKGISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLEGGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEGTFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAEDRYALLVIDSATALYRTDYCGRGELSERQMQLA 696
            IT+LE HGI+  DV++L  AG+ TVES+A  T + L+ VKG+S+ KA K+     KLVP+GFTTAT+   QR ++I +TTGSKELDKLLE GIETGS+TE+FGEFRTGKTQLCH LCV CQLPLD GGGEGKA+Y+DTEGTFRPQRL AIAER+GLNGDDVL+NVAYARA+NS+ QM LL  ASAMM+E RYA+L++DSATALYRTDY GRGELS RQM LA
Sbjct:   27 ITKLEQHGISAVDVKKLQGAGFYTVESVAFSTKKALIAVKGVSDTKADKILAEAAKLVPMGFTTATEFQKQRAEIIQVTTGSKELDKLLENGIETGSITEIFGEFRTGKTQLCHQLCVTCQLPLDQGGGEGKALYVDTEGTFRPQRLLAIAERYGLNGDDVLDNVAYARAYNSDHQMQLLAQASAMMSESRYAMLIVDSATALYRTDYSGRGELSARQMHLA 248
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13992.2981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4Q1_ECTSI7.260e-15796.54DNA repair protein RAD51 homolog n=2 Tax=Ectocarpu... [more]
A0A836CHV0_9STRA6.930e-13177.91DNA repair and recombination protein Rad51A n=1 Ta... [more]
W7TKJ9_9STRA2.310e-12578.35DNA repair protein RAD51 homolog n=2 Tax=Monodopsi... [more]
A0A7S1UHL6_9STRA1.040e-12376.99DNA repair protein RAD51 homolog n=1 Tax=Phaeomona... [more]
A0A6S8RTG3_9STRA6.120e-11471.00DNA repair protein RAD51 homolog n=1 Tax=Pelagomon... [more]
A0A7S2FUQ7_9STRA2.940e-11169.87DNA repair protein RAD51 homolog n=1 Tax=Dictyocha... [more]
A0A7S3XMC0_HETAK8.830e-11171.12DNA repair protein RAD51 homolog n=1 Tax=Heterosig... [more]
A0A1Z5KQ22_FISSO4.610e-10869.96DNA repair protein RAD51 homolog n=2 Tax=Fistulife... [more]
A0A7S2EBM1_TRICV1.500e-10770.56DNA repair protein RAD51 homolog n=1 Tax=Trieres c... [more]
L8H3I3_ACACA5.150e-10771.17DNA repair protein RAD51 homolog n=1 Tax=Acanthamo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13992contigL-elsbetiae_contig13992:2963..4376 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score449.5
Seed ortholog evalue9.5e-124
Seed eggNOG ortholog2880.D7G4Q1
Preferred nameRAD51
KEGG koko:K04482,ko:K14303
KEGG TC1.I.1
KEGG Pathwayko03013,ko03440,ko03460,ko05200,ko05212,map03013,map03440,map03460,map05200,map05212
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000018,GO:0000150,GO:0000166,GO:0000217,GO:0000228,GO:0000278,GO:0000280,GO:0000400,GO:0000709,GO:0000722,GO:0000723,GO:0000724,GO:0000725,GO:0000730,GO:0000775,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0000793,GO:0000794,GO:0000795,GO:0000800,GO:0001709,GO:0001932,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006275,GO:0006281,GO:0006282,GO:0006302,GO:0006310,GO:0006312,GO:0006323,GO:0006325,GO:0006342,GO:0006355,GO:0006403,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007127,GO:0007131,GO:0007143,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007293,GO:0007294,GO:0007389,GO:0007530,GO:0007531,GO:0007533,GO:0008022,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008156,GO:0008219,GO:0008298,GO:0008630,GO:0009058,GO:0009059,GO:0009314,GO:0009410,GO:0009628,GO:0009653,GO:0009719,GO:0009790,GO:0009792,GO:0009798,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009948,GO:0009949,GO:0009950,GO:0009951,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010032,GO:0010033,GO:0010035,GO:0010212,GO:0010243,GO:0010332,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010569,GO:0010604,GO:0010605,GO:0010629,GO:0010833,GO:0010941,GO:0010948,GO:0012501,GO:0014070,GO:0014074,GO:0016043,GO:0016458,GO:0016462,GO:0016604,GO:0016605,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0017151,GO:0019219,GO:0019220,GO:0019222,GO:0019899,GO:0019953,GO:0022402,GO:0022412,GO:0022413,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030261,GO:0030491,GO:0030554,GO:0030702,GO:0030706,GO:0030716,GO:0030717,GO:0031000,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031399,GO:0031974,GO:0031981,GO:0032200,GO:0032268,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033170,GO:0033260,GO:0033554,GO:0034622,GO:0034641,GO:0034645,GO:0035556,GO:0035639,GO:0035690,GO:0035825,GO:0035861,GO:0036094,GO:0036270,GO:0036297,GO:0040029,GO:0042148,GO:0042221,GO:0042325,GO:0042493,GO:0042592,GO:0042623,GO:0042771,GO:0042802,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043073,GO:0043142,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043279,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044703,GO:0044786,GO:0044877,GO:0045003,GO:0045005,GO:0045165,GO:0045786,GO:0045814,GO:0045892,GO:0045934,GO:0045935,GO:0046483,GO:0048285,GO:0048468,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048609,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051105,GO:0051106,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051246,GO:0051252,GO:0051253,GO:0051259,GO:0051260,GO:0051276,GO:0051321,GO:0051641,GO:0051704,GO:0051716,GO:0051726,GO:0060249,GO:0060255,GO:0060548,GO:0061806,GO:0061982,GO:0061988,GO:0065001,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0070192,GO:0070316,GO:0070317,GO:0070727,GO:0070887,GO:0071103,GO:0071214,GO:0071241,GO:0071310,GO:0071312,GO:0071407,GO:0071417,GO:0071478,GO:0071479,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0072331,GO:0072332,GO:0072710,GO:0072711,GO:0072757,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090329,GO:0090734,GO:0090735,GO:0097159,GO:0097190,GO:0097193,GO:0097305,GO:0097306,GO:0097327,GO:0097329,GO:0097367,GO:0098687,GO:0099086,GO:0104004,GO:0110026,GO:0110027,GO:0140013,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901563,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902298,GO:1902679,GO:1902969,GO:1903046,GO:1903047,GO:1903506,GO:1903507,GO:1905334,GO:1990414,GO:1990426,GO:1990505,GO:1990918,GO:2000104,GO:2000112,GO:2000113,GO:2000779,GO:2001020,GO:2001141
EggNOG free text desc.recombinase activity
EggNOG OGsCOG0468@1,KOG1433@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko03036,ko03400,ko04121,ko04131
Ec32 ortholog descriptionDNA repair and recombination protein Rad51A
Ec32 orthologEc-20_000810.1
Exons4
Model size702
Cds size702
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13992.2981.1prot_L-elsbetiae_contig13992.2981.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13992 2963..4376 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.7933185-CDS-L-elsbetiae_contig13992:2962..30731622815550.7933185-CDS-L-elsbetiae_contig13992:2962..3073Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 2963..3073 +
1691682954.0865407-CDS-L-elsbetiae_contig13992:2962..30731691682954.0865407-CDS-L-elsbetiae_contig13992:2962..3073Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 2963..3073 +
1622815550.8063848-CDS-L-elsbetiae_contig13992:3336..37271622815550.8063848-CDS-L-elsbetiae_contig13992:3336..3727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 3337..3727 +
1691682954.1000364-CDS-L-elsbetiae_contig13992:3336..37271691682954.1000364-CDS-L-elsbetiae_contig13992:3336..3727Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 3337..3727 +
1622815550.819397-CDS-L-elsbetiae_contig13992:4049..41491622815550.819397-CDS-L-elsbetiae_contig13992:4049..4149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 4050..4149 +
1691682954.1098464-CDS-L-elsbetiae_contig13992:4049..41491691682954.1098464-CDS-L-elsbetiae_contig13992:4049..4149Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 4050..4149 +
1622815550.8357358-CDS-L-elsbetiae_contig13992:4276..43761622815550.8357358-CDS-L-elsbetiae_contig13992:4276..4376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 4277..4376 +
1691682954.1238804-CDS-L-elsbetiae_contig13992:4276..43761691682954.1238804-CDS-L-elsbetiae_contig13992:4276..4376Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13992 4277..4376 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13992.2981.1

>prot_L-elsbetiae_contig13992.2981.1 ID=prot_L-elsbetiae_contig13992.2981.1|Name=mRNA_L-elsbetiae_contig13992.2981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=234bp
LRQVVAAFHHITELEAHGINRNDVQRLSEAGYCTVESIAHCTVRKLVEVK
GISEQKATKLKETVYKLVPIGFTTATQHLLQRQDLITLTTGSKELDKLLE
GGIETGSLTEVFGEFRTGKTQLCHTLCVACQLPLDGGGGEGKAMYIDTEG
TFRPQRLTAIAERFGLNGDDVLENVAYARAHNSEQQMDLLKMASAMMAED
RYALLVIDSATALYRTDYCGRGELSERQMQLAQ*
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mRNA from alignment at L-elsbetiae_contig13992:2963..4376+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13992.2981.1 ID=mRNA_L-elsbetiae_contig13992.2981.1|Name=mRNA_L-elsbetiae_contig13992.2981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1414bp|location=Sequence derived from alignment at L-elsbetiae_contig13992:2963..4376+ (Laminarionema elsbetiae ELsaHSoW15)
CTCCGACAGGTTGTAGCTGCATTCCACCATATCACGGAGCTGGAGGCTCA
CGGAATCAATCGGAACGATGTTCAGCGCTTGTCAGAAGCCGGCTACTGCA
CCGTCGAGTCGGTGAGGTTTGAATTTTGAATGAACCCTCTGCTCCCCTGA
TGATGGCATACATTGACTATCCCCGAGAACCCACCGGCCAGGTTCAAGAT
GGGCACACCAGGGTACACACACGTTCGAGTGTACTAGTACAATTTCCAAT
TCCACTCGTCCTGAGGCACGTACTGCTGTCGCCTGGGGGGTTGCGGCATT
CGGCAAGAGGGCCTTCAGCGTACGGAGATCGGGCGCACCTCATTCCCTTC
TTCAAACCCTAAAATCGGTCGCAGATAGCTCACTGCACCGTTCGCAAGCT
GGTGGAGGTGAAAGGCATCAGCGAGCAGAAGGCGACGAAGCTCAAGGAAA
CGGTTTACAAGCTGGTTCCAATCGGCTTCACAACCGCGACTCAGCATTTG
CTTCAGCGCCAGGACCTCATCACTCTGACAACTGGAAGCAAGGAGCTAGA
CAAGCTTCTCGAAGGGGGTATCGAGACGGGATCACTGACCGAGGTGTTTG
GGGAGTTTCGCACGGGCAAGACCCAGCTGTGTCACACGCTATGCGTGGCG
TGTCAGCTTCCTCTTGATGGTGGTGGGGGGGAGGGCAAAGCCATGTACAT
CGACACCGAAGGCACTTTCCGGCCTCAGCGACTCACGGCCATTGCGGAGC
GGTTCGGCCTCAACGGTGCGTGCCTGCCTGTGTGATTGTGCTCTTGGCAG
CTTTAACACTCGCCTTCTCATATGAGGGTATACGTTGCCGGGCTATGGCT
CGTTTGTAGGCCAGTAGATGATGTAGCGCGACGTACTCGGCAGCCTCCGA
TCCTTCCATACGAGTTGTTTACTGCTTGGATGAAGTGCGCGTGTGGGCTC
TATGACTTGGTGGTGCCAAACCTCCAAATATCATTTACAACTGCGGTGCT
CGTTCGCTTGACAAACTGGCATGACGCTCAAGGGCATGTTTTTTTCCCTC
GTGTGTCCACATGCTATCGACCGCCCGCCCGCTGCAGGAGACGACGTGCT
GGAGAACGTTGCCTATGCTAGGGCGCACAACTCAGAGCAGCAAATGGATC
TACTGAAGATGGCTTCCGCGATGATGGCTGAGGACAGGTGCGCACCTTTG
CTGTACATAAAATATTCCACCTCGCTGGGGTAGAAGCAATCAACGCAGCT
GCGGCACACCCGTTTTGGATTGACGCAATTCCTTTTGGACTTTGCTCACC
CACCATTTTTCCAGGTACGCTTTGCTGGTGATCGATAGTGCGACCGCCTT
GTACCGCACGGACTACTGTGGCCGAGGAGAGCTTTCAGAGAGACAAATGC
AACTGGCACAGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13992:2963..4376+

>mRNA_L-elsbetiae_contig13992.2981.1 ID=mRNA_L-elsbetiae_contig13992.2981.1|Name=mRNA_L-elsbetiae_contig13992.2981.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1404bp|location=Sequence derived from alignment at L-elsbetiae_contig13992:2963..4376+ (Laminarionema elsbetiae ELsaHSoW15)
CTCCGACAGGTTGTAGCTGCATTCCACCATATCACGGAGCTGGAGGCTCA
CGGAATCAATCGGAACGATGTTCAGCGCTTGTCAGAAGCCGGCTACTGCA
CCGTCGAGTCGCTCCGACAGGTTGTAGCTGCATTCCACCATATCACGGAG
CTGGAGGCTCACGGAATCAATCGGAACGATGTTCAGCGCTTGTCAGAAGC
CGGCTACTGCACCGTCGAGTCGATAGCTCACTGCACCGTTCGCAAGCTGG
TGGAGGTGAAAGGCATCAGCGAGCAGAAGGCGACGAAGCTCAAGGAAACG
GTTTACAAGCTGGTTCCAATCGGCTTCACAACCGCGACTCAGCATTTGCT
TCAGCGCCAGGACCTCATCACTCTGACAACTGGAAGCAAGGAGCTAGACA
AGCTTCTCGAAGGGGGTATCGAGACGGGATCACTGACCGAGGTGTTTGGG
GAGTTTCGCACGGGCAAGACCCAGCTGTGTCACACGCTATGCGTGGCGTG
TCAGCTTCCTCTTGATGGTGGTGGGGGGGAGGGCAAAGCCATGTACATCG
ACACCGAAGGCACTTTCCGGCCTCAGCGACTCACGGCCATTGCGGAGCGG
TTCGGCCTCAACGATAGCTCACTGCACCGTTCGCAAGCTGGTGGAGGTGA
AAGGCATCAGCGAGCAGAAGGCGACGAAGCTCAAGGAAACGGTTTACAAG
CTGGTTCCAATCGGCTTCACAACCGCGACTCAGCATTTGCTTCAGCGCCA
GGACCTCATCACTCTGACAACTGGAAGCAAGGAGCTAGACAAGCTTCTCG
AAGGGGGTATCGAGACGGGATCACTGACCGAGGTGTTTGGGGAGTTTCGC
ACGGGCAAGACCCAGCTGTGTCACACGCTATGCGTGGCGTGTCAGCTTCC
TCTTGATGGTGGTGGGGGGGAGGGCAAAGCCATGTACATCGACACCGAAG
GCACTTTCCGGCCTCAGCGACTCACGGCCATTGCGGAGCGGTTCGGCCTC
AACGGAGACGACGTGCTGGAGAACGTTGCCTATGCTAGGGCGCACAACTC
AGAGCAGCAAATGGATCTACTGAAGATGGCTTCCGCGATGATGGCTGAGG
ACAGGAGACGACGTGCTGGAGAACGTTGCCTATGCTAGGGCGCACAACTC
AGAGCAGCAAATGGATCTACTGAAGATGGCTTCCGCGATGATGGCTGAGG
ACAGGTACGCTTTGCTGGTGATCGATAGTGCGACCGCCTTGTACCGCACG
GACTACTGTGGCCGAGGAGAGCTTTCAGAGAGACAAATGCAACTGGCACA
GTGAGTACGCTTTGCTGGTGATCGATAGTGCGACCGCCTTGTACCGCACG
GACTACTGTGGCCGAGGAGAGCTTTCAGAGAGACAAATGCAACTGGCACA
GTGA
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