mRNA_L-elsbetiae_contig1399.2979.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1399.2979.1
Unique NamemRNA_L-elsbetiae_contig1399.2979.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: D7FUX7_ECTSI (NAC-A/B domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUX7_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.640e-109
Identity = 184/195 (94.36%), Postives = 192/195 (98.46%), Query Frame = 3 
Query:   30 MSEFEEAKVVADPEVEDIEGDSDDDIPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTMD 614
            M+EFEEAKVVADPEVEDIEGDSDDDIPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEA AA  SAA++PAV++GAD+DTDELVDETGVEPKDIELIMSQA+C+RSAAVNALKKNDGDIVNAIMELTMD
Sbjct:    1 MTEFEEAKVVADPEVEDIEGDSDDDIPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEAAAA--SAAAIPAVNTGADVDTDELVDETGVEPKDIELIMSQASCTRSAAVNALKKNDGDIVNAIMELTMD 193
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A6U2NW63_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2NW63_9STRA)

HSP 1 Score: 190 bits (483), Expect = 6.340e-56
Identity = 115/179 (64.25%), Postives = 137/179 (76.54%), Query Frame = 3 
Query:   90 DSDDDIPELEEQV------GGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELT 608
            DSDDD+PELEEQ       G D   + + GKQNR EKKARKA+QKLGM+ VP +MRVTVKKSKN+LFVI KPDV KSP+++ YV+FGEAK EDLSAQ Q QAA++F  P   AAA++A   PAV+     D DE +DETGVE KDIEL+MSQA CSR+ AV ALK+NDGD+VN+IM LT
Sbjct:   10 DSDDDVPELEEQTEEVPTPGADAGGDAEEGKQNRAEKKARKAMQKLGMRPVPGVMRVTVKKSKNVLFVIQKPDVFKSPNADAYVVFGEAKSEDLSAQNQAQAAKQFRVPPTEAAAAAA---PAVAE----DADEALDETGVEAKDIELVMSQAGCSRARAVKALKENDGDLVNSIMSLT 181
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A7S0I6J4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6J4_9EUKA)

HSP 1 Score: 187 bits (475), Expect = 1.290e-54
Identity = 115/170 (67.65%), Postives = 132/170 (77.65%), Query Frame = 3 
Query:  105 IPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAA-SSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTM 611
            +PELE   GGDD   P   KQ+R+EKK+RKA+QKLGMK VP IMRVTVKKSKNILFVISKPDV KSP+S+T++IFGEAKIEDLSAQAQ  AAE+F APE      ++ A  P +    +ID    VDE+GVEPKD+EL+MSQA  SRS AV ALK NDGDIVNAIMELTM
Sbjct:   27 MPELENAEGGDD---PSKAKQSRSEKKSRKAMQKLGMKPVPGIMRVTVKKSKNILFVISKPDVFKSPASDTFIIFGEAKIEDLSAQAQTAAAEQFKAPEVPKPELANKAEKPTIE---EIDDGAEVDESGVEPKDVELVMSQAGVSRSKAVKALKTNDGDIVNAIMELTM 190
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A813HFS2_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HFS2_POLGL)

HSP 1 Score: 182 bits (463), Expect = 5.310e-53
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 3 
Query:   48 AKVVADPEVEDIEGDSDDDIPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELT 608
            AKV  DPEV D + DSDDD+P LE   GG+     KGGKQNR EKK+RKAV KLGMK VP I RVTVKKSKNILFVIS PDVHKSP+S+TY++FGEAK+EDLSAQAQ  AA++     A  A S AA++  V  G        VDE+GVE KDI+L+MSQ  C+R  AV ALK N+ DIV AIM+L+
Sbjct:    2 AKVEEDPEVADADSDSDDDMPNLE---GGEGD---KGGKQNRAEKKSRKAVSKLGMKPVPGITRVTVKKSKNILFVISNPDVHKSPNSDTYIVFGEAKVEDLSAQAQANAAQQLGGGAAAKAPSVAAAIEEVDEGD-------VDESGVEAKDIDLVMSQVQCTRGKAVAALKANNNDIVEAIMQLS 175
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A7S3HZQ4_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3HZQ4_9SPIT)

HSP 1 Score: 181 bits (458), Expect = 5.740e-52
Identity = 112/168 (66.67%), Postives = 129/168 (76.79%), Query Frame = 3 
Query:  111 ELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPE-ATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTM 611
            ELE   GGD  A     KQ+R+EKK+RKA+QKLGMK VP IMRVTVKKSKNILFVI+KPDV KSP+S+TY+IFGEAKIEDLSAQAQQQAAE+F  P  A    +  A  P +    +I+ D  +DETGVEPKD+EL+MSQA   R+ AV ALK NDGDIVNAIMELTM
Sbjct:   35 ELEAAEGGDGDAARV--KQSRSEKKSRKAMQKLGMKPVPGIMRVTVKKSKNILFVIAKPDVFKSPASDTYIIFGEAKIEDLSAQAQQQAAEQFKEPVMAKPEMAKVAQKPVIE---EIEADGEIDETGVEPKDVELVMSQAGVPRARAVKALKMNDGDIVNAIMELTM 197
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A8J5XTS1_DIALT (NAC-A/B domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XTS1_DIALT)

HSP 1 Score: 179 bits (455), Expect = 1.420e-51
Identity = 104/151 (68.87%), Postives = 119/151 (78.81%), Query Frame = 3 
Query:  159 GKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTM 611
            GKQ+R+EKK+RKA+QKLGMK VP IMRVTVKKSKNILFVI KPDV KSP+S+TY+IFGEAKIEDLSAQAQ  AAE+F+APE   A +            D ++DE +D TGVE KDIEL+MSQA  SR  A  AL+KNDGDIVNAIMELTM
Sbjct:   44 GKQSRSEKKSRKAMQKLGMKPVPGIMRVTVKKSKNILFVIQKPDVFKSPASDTYIIFGEAKIEDLSAQAQSHAAEQFNAPEPPKALAPVKEAKQSKFEEDDESDEKIDTTGVEEKDIELVMSQAGVSRVKACKALQKNDGDIVNAIMELTM 194
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A7S2V7B3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V7B3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 4.940e-51
Identity = 120/197 (60.91%), Postives = 139/197 (70.56%), Query Frame = 3 
Query:   45 EAKVVADPEVEDIEGDSDDDIPELEEQV-------GGDDSAEPKG-GKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTM 611
            E  V   P VED++ DSD+ +P+LEEQ        G D  A P G GKQNR+EKK+RKA+QKLGM+ VP I+RVTVKKSKNILFVISKPDV KSPSS+T++IFGEAKIEDLSAQAQ  AAE+F  PEA+AA                         GVEPKDIEL+MSQA  +R+ AV ALKKN+GDIVNAIMELTM
Sbjct:    8 EEPVQEKPVVEDVDEDSDE-MPDLEEQPEGAAPAGGADAEAGPAGSGKQNRSEKKSRKAMQKLGMRPVPGIIRVTVKKSKNILFVISKPDVFKSPSSDTHIIFGEAKIEDLSAQAQSAAAEQFRTPEASAAVPPXXXXXXXXXXXXXXX--XXXXXGVEPKDIELVMSQAGVTRAKAVKALKKNEGDIVNAIMELTM 201
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A7S3CMT6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidium rassoulzadegani TaxID=1082188 RepID=A0A7S3CMT6_9SPIT)

HSP 1 Score: 177 bits (449), Expect = 9.540e-51
Identity = 111/169 (65.68%), Postives = 130/169 (76.92%), Query Frame = 3 
Query:  105 IPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTM 611
            +PELE + GG        GKQ+R+EKK+RKA+QKLGMK +P +MRVT+KKSKNILFVISKPDV KSP+++TYVIFGEAKIEDLSAQAQ  AAE+F   EA A  S   S     S A+ D  E VDETGVEPKDI+L+MSQA  +R  AVNALK+ DGDIV+AIMELTM
Sbjct:   31 MPELEGEDGG------SRGKQSRSEKKSRKAIQKLGMKPLPGVMRVTIKKSKNILFVISKPDVFKSPATDTYVIFGEAKIEDLSAQAQASAAEQFKMSEAQAIESKDTSA----SAAEEDEGE-VDETGVEPKDIDLVMSQAGVTRGKAVNALKQADGDIVSAIMELTM 188
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A7S0FF21_9DINO (Hypothetical protein n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FF21_9DINO)

HSP 1 Score: 177 bits (450), Expect = 1.050e-50
Identity = 118/200 (59.00%), Postives = 144/200 (72.00%), Query Frame = 3 
Query:   21 PSKMSEFEEAKVVADPEVEDIEGDSDDDIPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPA--VSSGADIDTDEL--VDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELT 608
            P+K++E  EA+   D    D    +D+D+P LE     DDS +   GKQNR+EKK+RKAVQKLGMK VP I+RVTVKKSKNILFVISKPDVHKSP+S+TY++FGEAKIEDLSAQAQ  AA++F+   A  AAS A   PA     G  I+  E    DETG+EPKDIEL+MSQ +CSR+ AV AL+ N+ DIV AIM L+
Sbjct:    8 PAKVAENAEAEAEVDSG--DDSDSTDEDMPNLENT---DDSKKEDRGKQNRSEKKSRKAVQKLGMKPVPGIVRVTVKKSKNILFVISKPDVHKSPNSDTYIVFGEAKIEDLSAQAQASAAQQFTQQSAEPAASGAGE-PAERAEQGPKIEEVEEGDADETGIEPKDIELVMSQVSCSRAKAVQALRSNNNDIVEAIMMLS 201
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BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Match: A0A5D6XNW0_9STRA (NAC-A/B domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XNW0_9STRA)

HSP 1 Score: 176 bits (447), Expect = 1.960e-50
Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 3 
Query:   93 SDDDIPELEEQVGGDDSAEPKGGKQNRNEKKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIFGEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELVDETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTM 611
            SDD+IP LEE  GGDD+   + GK NR+EKKARKA+QKLG+K V  I+RVT+KKSK+ILFVISKPDV KS  S+TYVIFGEAKIEDL+AQAQQ AA++F APEA  AA+  A++  V   AD      VDE+G++ KDI+L+MSQA  S++ AV AL+ ND DIVNAIMELTM
Sbjct:   25 SDDEIPALEE-AGGDDA---EAGKNNRSEKKARKAMQKLGLKPVSGIIRVTIKKSKSILFVISKPDVFKSAVSDTYVIFGEAKIEDLNAQAQQMAAQQFKAPEADEAAAGGATVQDV---ADDXXXXXVDESGIDAKDIQLVMSQAGVSKAKAVAALRSNDNDIVNAIMELTM 190
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1399.2979.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUX7_ECTSI1.640e-10994.36NAC-A/B domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6U2NW63_9STRA6.340e-5664.25Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S0I6J4_9EUKA1.290e-5467.65Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A813HFS2_POLGL5.310e-5361.50Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S3HZQ4_9SPIT5.740e-5266.67Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
A0A8J5XTS1_DIALT1.420e-5168.87NAC-A/B domain-containing protein n=1 Tax=Diacrone... [more]
A0A7S2V7B3_9STRA4.940e-5160.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3CMT6_9SPIT9.540e-5165.68Hypothetical protein (Fragment) n=1 Tax=Strombidiu... [more]
A0A7S0FF21_9DINO1.050e-5059.00Hypothetical protein n=1 Tax=Pyrodinium bahamense ... [more]
A0A5D6XNW0_9STRA1.960e-5064.16NAC-A/B domain-containing protein n=1 Tax=Pythium ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1399contigL-elsbetiae_contig1399:13190..18102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.6
Seed ortholog evalue6.4e-89
Seed eggNOG ortholog2880.D7FUX7
KEGG koko:K03626
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005829,GO:0005840,GO:0005854,GO:0005911,GO:0006457,GO:0006458,GO:0006950,GO:0006970,GO:0008150,GO:0009506,GO:0009628,GO:0009651,GO:0009987,GO:0012505,GO:0022626,GO:0030054,GO:0032991,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0050896,GO:0051082,GO:0051083,GO:0055044,GO:1990904
EggNOG free text desc.protein transport
EggNOG OGsCOG1308@1,KOG2239@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionNascent polypeptide-associated complex NAC domain
Ec32 orthologEc-01_008570.1
Exons5
Model size1134
Cds size588
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.6261418-UTR-L-elsbetiae_contig1399:13189..132181622815550.6261418-UTR-L-elsbetiae_contig1399:13189..13218Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1399 13190..13218 +
1691682953.966018-UTR-L-elsbetiae_contig1399:13189..132181691682953.966018-UTR-L-elsbetiae_contig1399:13189..13218Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1399 13190..13218 +
1622815550.707887-UTR-L-elsbetiae_contig1399:17585..181021622815550.707887-UTR-L-elsbetiae_contig1399:17585..18102Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1399 17586..18102 +
1691682954.0348375-UTR-L-elsbetiae_contig1399:17585..181021691682954.0348375-UTR-L-elsbetiae_contig1399:17585..18102Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1399 17586..18102 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.6375625-CDS-L-elsbetiae_contig1399:13218..132661622815550.6375625-CDS-L-elsbetiae_contig1399:13218..13266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 13219..13266 +
1691682953.9787948-CDS-L-elsbetiae_contig1399:13218..132661691682953.9787948-CDS-L-elsbetiae_contig1399:13218..13266Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 13219..13266 +
1622815550.6496105-CDS-L-elsbetiae_contig1399:13990..140621622815550.6496105-CDS-L-elsbetiae_contig1399:13990..14062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 13991..14062 +
1691682953.9881744-CDS-L-elsbetiae_contig1399:13990..140621691682953.9881744-CDS-L-elsbetiae_contig1399:13990..14062Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 13991..14062 +
1622815550.6621897-CDS-L-elsbetiae_contig1399:15479..157311622815550.6621897-CDS-L-elsbetiae_contig1399:15479..15731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 15480..15731 +
1691682954.0053568-CDS-L-elsbetiae_contig1399:15479..157311691682954.0053568-CDS-L-elsbetiae_contig1399:15479..15731Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 15480..15731 +
1622815550.6775904-CDS-L-elsbetiae_contig1399:16351..164771622815550.6775904-CDS-L-elsbetiae_contig1399:16351..16477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 16352..16477 +
1691682954.0147257-CDS-L-elsbetiae_contig1399:16351..164771691682954.0147257-CDS-L-elsbetiae_contig1399:16351..16477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 16352..16477 +
1622815550.6926687-CDS-L-elsbetiae_contig1399:17495..175851622815550.6926687-CDS-L-elsbetiae_contig1399:17495..17585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 17496..17585 +
1691682954.0236816-CDS-L-elsbetiae_contig1399:17495..175851691682954.0236816-CDS-L-elsbetiae_contig1399:17495..17585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1399 17496..17585 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1399.2979.1prot_L-elsbetiae_contig1399.2979.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1399 13219..17585 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1399.2979.1

>prot_L-elsbetiae_contig1399.2979.1 ID=prot_L-elsbetiae_contig1399.2979.1|Name=mRNA_L-elsbetiae_contig1399.2979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp
MSEFEEAKVVADPEVEDIEGDSDDDIPELEEQVGGDDSAEPKGGKQNRNE
KKARKAVQKLGMKAVPSIMRVTVKKSKNILFVISKPDVHKSPSSNTYVIF
GEAKIEDLSAQAQQQAAERFSAPEATAAASSAASMPAVSSGADIDTDELV
DETGVEPKDIELIMSQAACSRSAAVNALKKNDGDIVNAIMELTMD*
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mRNA from alignment at L-elsbetiae_contig1399:13190..18102+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1399.2979.1 ID=mRNA_L-elsbetiae_contig1399.2979.1|Name=mRNA_L-elsbetiae_contig1399.2979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4913bp|location=Sequence derived from alignment at L-elsbetiae_contig1399:13190..18102+ (Laminarionema elsbetiae ELsaHSoW15)
CTCACAGCCACCCTCCCCCACCCAGCAAGATGTCGGAGTTCGAGGAAGCG
AAGGTTGTGGCTGACCCGGAAGTTGAGGTGAGTGGGAGACGTTCCTCTGA
AAAATCAAAAATCAAAACGAAAGATGCGGCCAACACCATTGATTGCGTTT
GTTCGTGCTGCAACAGCAGTGGCCACCAGTAGAGGCAGCGTGGGCACAGA
CAGGCGAGGCATTCATTGATTGGTACAGCTCGAGACCGATGAGCTCCCCC
ATTTGGAGTTTTTCTGCGGTTTCCTAGCTGGCGTGAAGCAAGAAATAGGA
GGTGGGAAGGATGTGGGATGTGGGCGCCTGTTCTTTACAATATGTGTACT
GGGGACGGATGTGCCTTGTGTGAAGGCTGAGCACGACACCGCTGTCTCAC
AGCTGTCTCACACTATATCTTCGCTGCTGATGTTTCTAGCACATAGAAAG
CCAAGTAAACGTAGGCTATCTCCGCATCACATGCAAAAAAACATCTGCAA
CCCCTGGCTTCTCAGGCGTCCTGTTATCCAGGATAACATAAACAGACGCG
TTGCGCAGCACGTGCAGACATTCCTCCCCTATCTCCCCGGCTGCGATTTG
CCGATTTGTGCTGCAAGTAATGAATTCCACTTTTGATGCCCCACTACCAA
TACTGCAAACGTGTTTTGTGCTTCGCCTGACTACCCAAGTGGCAACAGTA
ACGTATTGTGCTTGACTTTGACACCACTCAGCGCCCACCTTCCACAACCT
GTTTGACAACGTTTTGGTGGATTATTCGGCGTTGCCGCTGTCGTGCGCCA
GGACATCGAGGGAGACTCCGATGACGACATCCCGGAGCTGGAGGAGCAGG
TTGGGGGGGATGACTCCGCGGAGGTAAGCAGAAAAAAAAATAATCGTGGT
GGTGCACGATAGCTAGACTTCGTTGACGGTGCCCCCCCCCCAAGGAACCA
AGAACGATGCGATGGCCAGGCCGAGTTGGAGATCTCGTTGCCGAACCAGG
CAGCCGGTGTTTTGATTCTCAGAGAAATTGACAGCCGCGCACGTACATTA
ATATCGATTCCAACTAAATAGCATACAAGTATGTATAGAGCGAACGAGAT
CGGGAGCGCAGGTGTACAAAAGTCGTCCAAGACGTATGTAAAACCACCAC
GCCAGTAAGATAGATACCCTCGGAAGATACGGCGCTGCTGCAACTACTGC
ACGCGACACGACGATGGGCTTGTTGTTCCCCGCAATCTGATTTGTTGCAC
CCGAAACAGCGGCGTTGCGCTTCTGTACGCTGTCGATATCTATATCGATA
CCGATGTCGGTCGAGCGGGAAAAGAACTGGGGGTCATTCCTTTCTTTTTG
GAGGAGAGGGCAGGCAGACAGATACGCTCGGGAGAGATAGGTGCTTCGAA
TCTTCCGGAAATTTCGATACAAACGCCGTGTTGAAACCCGGGTACGCCTG
CTGTTTCGGGCCGGCCTAGAGGGCTGGTGGGGTGTAACATGGAGCGGGGA
TGTGCTGGAATTGAGCACTGAAAGCACAAAGGCCGCACTCAGACCTTTCA
ACCTGCTGTCCCACTGCCGCCGATGGTGATGGCTGGTGAGACAAGACACT
CATGAAGCAGCACGGGGTGGGTTGCAAAGCCAGCAATACATGCCCGCGTT
CACAACGCTCACGGCAAAGCCAGACAGACTGCCTGCCAGTGTGCAGAGCC
GTGCACGCTGCCTGCAAAGCGTTCCTCAAAAAGACCACAGCGGAAACCTA
GCGGTGTCGACGCGATCTCGTTGTCTGCGAGACCGACCATCCCCGTCTGC
GCGTTGGTGTGCCTTTGCGGGGCGCTTCGCTTGCTCCCGCCAGCCATGAT
TGCGGTGCTCGTGGCTGGTTCAACCCCGCGTTTATTCACGCCGTGCCTCT
CCTTTGCACAACGCTTGTTTTCGTCTCTCACCGCGCTGCGCCTGAAATCG
TCGATTCCGCATCAAACAGCTCACCTCTCTCTCCTCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCATAATT
TNNNACGGGCGTTTTCCATCCCTCCCCCCCCTCCCCCTGAAAACTCTCTT
GCCCCCCCAAAAACACCACCCCCTCTCCCCCCCCCCCCCCCCCCCCCGCC
GCCCCCCCCGTTCTCGTCACCCGTCTCCGAATCACGGCCAAACCGAACCA
TGGTGAACCTCGCCGGCCCGCCCGCACTTAACCCGCACAGCCGAAGGGGG
GCAAGCAGAACCGCAACGAGAAGAAGGCGCGAAAGGCCGTGCAGAAGCTC
GGCATGAAGGCTGTCCCGTCGATCATGCGCGTGACGGTCAAGAAGAGCAA
GAACATCCTGTTCGTCATCTCCAAGCCCGACGTCCACAAGAGCCCCTCCT
CCAACACCTACGTGATCTTCGGAGAGGCCAAGATCGAGGACCTCTCGGCG
CAGGCGCAGCAGCAGGCGGCCGAGCGGTTCAGCGCGCCCGAGGTAACGAC
GCTTGTGTCAATGTGTGCGTGTCTGCCCGCTGTGTGCAATGTTGCTCTGT
CCGTGGTTTTTCGTGTCTCAGATGGTCGGTTGGTACTGTGCTGCCGGTGC
ATTTGTTGATGTTGCCTTTGCTGCTGTTCGCTCTCGAGTGATGTTTCCTC
GTGTTCCGTCTCCCGCACGTCCGTCTGTAAGTACGAGCTCATCTGAAACA
TGTAGAGTCATTCTTTAGGGCCACGCGATGGACGCTTGTGTTTCTGCCTC
GCTCGCATCATGTGTCTAATTGTTTGTGGTAGGGTGCACATACCAAAAGT
ACGAGGTTGGCTTCCAGATGGTGCGCTTGCTGCTTGTCTCCTACGCCCCC
GTGACAATGACGTTTCTCGCGCATCGCCGCACGCGGGTGAATCCTTTGTC
TTTAGCCTGTTGTGTTGTTCTGTCCTCTGTTTTGTGTGGTGTTGCGGACT
ACGCTCCCGCTTCAGCCCCAAACGGACACATGAGCCCACGCCGTCAGGAG
CCCTTCCTCTCTGTTGACTGCCGGTTCCTCGTTGTCGTTCATTGGTTGGT
CCATTTGGTGTCGTCATTTATCGATTGCATCCCCCCCCACCCCCTCCCTC
CAAACACAACAGGCGACGGCGGCGGCGTCTTCGGCAGCATCCATGCCGGC
CGTATCCTCGGGAGCGGACATTGACACGGACGAGCTGGTGGACGAGACGG
GGGTGGAGCCCAAGGACATCGAACTCATCATGAGCCAGGTGGGCATGCTA
TGTGCAACGGGGCACGATCCATACAGCCGCCCCCGCAAGAGCCGAAAGCC
TCCTGACGAGGCCAACCGTGCCATGTCTACTTCCTCTTTTTGTCTTGTTC
GGTCTAGTTCTGGTCTGGAGCAGAGGGTAGTTAGTTGTGCAAGGCGTACA
GGACGCCCGCCTGGATACGTATGTAGTAGGAAACGTTTGTTGTTTTTGGC
CGGGGCTGCATTTCTCATGTTCTGTGCACGACTCGGTACACGCCCTGCTG
ACGCCTGGCACGCGCGGAATTGCCAAGCGTCTGTGACCAAAATGTTTCCG
TGTTCACTTTTCACGATTCGTTTTTGGTTGCCGCAAGATTGCCTGCCTCT
TTGGCCTCGGCGTTGCTGCCTGGGGGGAGGGGTTGCCCTCTTTTGTAGCT
GCTTTGCTGCTGCTGTTCTATGGGTACATATCGGTGTGGATGTGGCGTTT
CAGAATGTTCGTCGTGTTATCGGCCAGTTTTAGTCGGGTTCTAAAGCTTG
TCCCTCCTTGAGAAGCCTGGGACTTGGCTTCCAAGCGGCTCCGGGGAAAG
AGGAGAGGGGGGGCTACGTGACACGTTATTTACAAGGCACCTACCTACCA
TTGCCCTCCTTGGTTGCTATACGTATGTATGTATACCTAGCGTCAACCTC
ACAAGAGACTGATTGTTTGACGCTTTTTTGCTCGGCTTGGTATATTCGCG
GCACAAGTATTGCTATTCCTTACCCTTAGCCTCCCTGAGGAAAAGCGCGA
AGCCCGCCTTTCCGTTCTCTCTTGAGGATGACGCGGGGGGCGGGGGGGGG
GGCAACGTGGATCGGCCCTTGGCGTATTCATTCACATGACCCGTAGTACG
CTTGCTGTAATCGGTAGATACTTCTGCCGCCGCCGCTGCTGGTGCGCTCA
CCCGCGACAACCGTTTGCTTCCCTCCCCCTGTGTTGATGCTCAACTTTTT
TTCTTTACCCTGCCCTCTGTTCTGTTTGCTGTCGTTGATCCCCATCCATC
CCAAAGGCGGCTTGCTCACGGTCGGCGGCAGTTAACGCGTTGAAGAAGAA
CGATGGCGACATCGTGAACGCCATCATGGAGCTCACCATGGACTAGACGA
AGAGAGAGTACGCTACCTTAGGGGGAGGGTGAAGAGATAAAATGAGGGAG
AGGGAAAAGCAGAGGCGGGGGTTACCAAGGAGGTCCTGTCTGCCTCGGGG
CGGCTAGCTAGGGTACGGAGAGGGAGAGGCAATATTTTTCTTTTTTTTGT
TCATTTGGTTCCTCCATTTCTGAAGACGATCGCCGGAGGCCCCCCTTTAG
GCTTTGCCGCGCTGCCGTTCTGAAGGGAAACAAGAAAGGGAAGAGAGTTT
TTTTACCACCATTCCCCCGACCTTTTCTTGAGCGCGCCTGCGGGCCGGCT
CAGCCGCGCTCGAGCGTATGTGACCAGTGTTTCGAGACGCTTTTTGGGGG
GTCGGGTTGGGTTCGACCTCTTGCTGCTGCTGCTCGCTGTCTTTAGGGTT
AGCCCGACAGCTGGGGGGAGAAAGCGTGGTATGTTTTTGTACCCGTCTCG
TGGAGGCATGAAAACTGCCTCGGCGGTGCCTTTAGCCGGCGCGTCCGTCT
ACTTTAATCCTGC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1399:13190..18102+

>mRNA_L-elsbetiae_contig1399.2979.1 ID=mRNA_L-elsbetiae_contig1399.2979.1|Name=mRNA_L-elsbetiae_contig1399.2979.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig1399:13190..18102+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGGAGTTCGAGGAAGCGAAGGTTGTGGCTGACCCGGAAGTTGAGAT
GTCGGAGTTCGAGGAAGCGAAGGTTGTGGCTGACCCGGAAGTTGAGGACA
TCGAGGGAGACTCCGATGACGACATCCCGGAGCTGGAGGAGCAGGTTGGG
GGGGATGACTCCGCGGAGGACATCGAGGGAGACTCCGATGACGACATCCC
GGAGCTGGAGGAGCAGGTTGGGGGGGATGACTCCGCGGAGCCGAAGGGGG
GCAAGCAGAACCGCAACGAGAAGAAGGCGCGAAAGGCCGTGCAGAAGCTC
GGCATGAAGGCTGTCCCGTCGATCATGCGCGTGACGGTCAAGAAGAGCAA
GAACATCCTGTTCGTCATCTCCAAGCCCGACGTCCACAAGAGCCCCTCCT
CCAACACCTACGTGATCTTCGGAGAGGCCAAGATCGAGGACCTCTCGGCG
CAGGCGCAGCAGCAGGCGGCCGAGCGGTTCAGCGCGCCCGAGCCGAAGGG
GGGCAAGCAGAACCGCAACGAGAAGAAGGCGCGAAAGGCCGTGCAGAAGC
TCGGCATGAAGGCTGTCCCGTCGATCATGCGCGTGACGGTCAAGAAGAGC
AAGAACATCCTGTTCGTCATCTCCAAGCCCGACGTCCACAAGAGCCCCTC
CTCCAACACCTACGTGATCTTCGGAGAGGCCAAGATCGAGGACCTCTCGG
CGCAGGCGCAGCAGCAGGCGGCCGAGCGGTTCAGCGCGCCCGAGGCGACG
GCGGCGGCGTCTTCGGCAGCATCCATGCCGGCCGTATCCTCGGGAGCGGA
CATTGACACGGACGAGCTGGTGGACGAGACGGGGGTGGAGCCCAAGGACA
TCGAACTCATCATGAGCCAGGCGACGGCGGCGGCGTCTTCGGCAGCATCC
ATGCCGGCCGTATCCTCGGGAGCGGACATTGACACGGACGAGCTGGTGGA
CGAGACGGGGGTGGAGCCCAAGGACATCGAACTCATCATGAGCCAGGCGG
CTTGCTCACGGTCGGCGGCAGTTAACGCGTTGAAGAAGAACGATGGCGAC
ATCGTGAACGCCATCATGGAGCTCACCATGGACTAGGCGGCTTGCTCACG
GTCGGCGGCAGTTAACGCGTTGAAGAAGAACGATGGCGACATCGTGAACG
CCATCATGGAGCTCACCATGGACTAG
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