prot_L-elsbetiae_contig10254.298.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10254.298.1
Unique Nameprot_L-elsbetiae_contig10254.298.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length94
Homology
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BLAST of mRNA_L-elsbetiae_contig10254.298.1 vs. uniprot
Match: A0A6H5JH57_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH57_9PHAE)

HSP 1 Score: 49.7 bits (117), Expect = 6.570e-5
Identity = 40/95 (42.11%), Postives = 50/95 (52.63%), Query Frame = 0 
Query:    1 MRNLTMSADDERRQMEEDNRLAPAMQKGEAADTVGARGLSAEAMIPAELVPEATS-SPPFSHVPMEDRNGGXXXXXXXXXXXXXGGWRASSGSKG 94
            +RN  ++AD ERRQMEED RLA AMQKGEAA   G  G       P +  P +++ S  FS +   +R+G                WR SSGSKG
Sbjct:   29 LRNFAVTAD-ERRQMEEDYRLALAMQKGEAAAANGTGGRGVPVAAPVQAPPASSAGSSSFSRMLGNERDGNSGGAGGGGI------WRRSSGSKG 116
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10254.298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JH57_9PHAE6.570e-542.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10254contigL-elsbetiae_contig10254:3674..4992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10254.298.1mRNA_L-elsbetiae_contig10254.298.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10254 3674..5249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10254.298.1 ID=prot_L-elsbetiae_contig10254.298.1|Name=mRNA_L-elsbetiae_contig10254.298.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=94bp
MRNLTMSADDERRQMEEDNRLAPAMQKGEAADTVGARGLSAEAMIPAELV
PEATSSPPFSHVPMEDRNGGNGGDSGGSGGSGSGGWRASSGSKG
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