mRNA_L-elsbetiae_contig13975.2974.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13975.2974.1
Unique NamemRNA_L-elsbetiae_contig13975.2974.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: D7FNJ0_ECTSI (SASA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNJ0_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 7.100e-115
Identity = 178/261 (68.20%), Postives = 203/261 (77.78%), Query Frame = 1
Query:   10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGNDQ 792
            VSA   AKR VAGSDV++LMGQSNMSGRGQGYD  IDGPN+PRI+QWSRANT+ITA EHLQH D   + +++ VGMGTAFGRAY ETLPA R+VLLV T +GGT LVNGPWSPGG LFEDAV R EAALAS G  A GNCVAAVLWHQGESDA   V  + Y+  WT+MI  LRSR+PAAAEAPV+LG F   W+  N  +  P+L AIRA+PDSV F+ VA +D LS N G  +HF AA QRE+GQRYFDKLGDA+ N Q
Sbjct:   22 VSADYTAKRKVAGSDVILLMGQSNMSGRGQGYDANIDGPNDPRIQQWSRANTVITASEHLQHADFAIVEETR-VGMGTAFGRAYVETLPAKRNVLLVSTGYGGTRLVNGPWSPGGRLFEDAVRRTEAALASNG--ATGNCVAAVLWHQGESDAIAGVDQETYQFTWTDMINTLRSRIPAAAEAPVILGEFTPAWIAGNRALSEPILSAIRAIPDSVPFTVVAPSDGLSSNFGDPVHFTAAAQREYGQRYFDKLGDAVRNSQ 279          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: D7FNI7_ECTSI (SASA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNI7_ECTSI)

HSP 1 Score: 337 bits (864), Expect = 1.080e-113
Identity = 176/262 (67.18%), Postives = 203/262 (77.48%), Query Frame = 1
Query:    1 TTPVSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786
            +T VSA C AKRDVAGSDVV+LMGQSNMSG G+GYD  IDGPN+PRI+QWSR NT+ITA E LQH D G  GK + VGMGTAFGRA+ +TLPA+R+VLLVPTA G T LVNGPWSPGG LFEDAV R EAALAS G  A GNCVAA+LWHQGESDA   +  + Y+S WT MI  LRSR+PAAAEAPV+LG F    +  N  +  P++ AIRA+PDSV F+AVA +D LS N    +HFDA GQRE+GQRYFDKL DA+ N
Sbjct:   23 STSVSADCTAKRDVAGSDVVLLMGQSNMSGWGEGYDADIDGPNDPRIQQWSRDNTVITASERLQHADHGRAGKRR-VGMGTAFGRAFVKTLPANRNVLLVPTAFGATRLVNGPWSPGGNLFEDAVTRMEAALASNG--AAGNCVAAILWHQGESDAGDGIDQETYQSIWTNMINTLRSRIPAAAEAPVILGEFTPHMLARNRALSEPIIAAIRAIPDSVPFTAVAPSDGLSTNSVGPVHFDAVGQREYGQRYFDKLDDAVRN 281          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: D7FNI9_ECTSI (SASA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNI9_ECTSI)

HSP 1 Score: 336 bits (861), Expect = 1.910e-113
Identity = 175/259 (67.57%), Postives = 205/259 (79.15%), Query Frame = 1
Query:   10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786
            VSA CAAKR+VAGSDVV+LMGQSNMSG G+GYD  IDGP++PRI+QWSRANT+ITA E LQH D   + +++ VGMGTAFGRAY +TLPA+R+VLLVPTA G T LVNGPWSPGG LFEDAV R EAALAS G  A GNCVAAVLWHQGE DA   +  + Y+S WT+MI  LRSR+PAAAEAPV+LG F    +  N  +  P++ AIRA+PDSV F+AVA +D LS N G  +HFDAA QRE+GQRYFDKLGDA+ N
Sbjct:   16 VSADCAAKRNVAGSDVVLLMGQSNMSGWGEGYDADIDGPDDPRIQQWSRANTVITASERLQHADFDRIDQTR-VGMGTAFGRAYVKTLPANRNVLLVPTAFGATRLVNGPWSPGGNLFEDAVTRMEAALASNG--AVGNCVAAVLWHQGEGDAAGRIDQETYQSTWTDMINTLRSRIPAAAEAPVILGEFTPHMLARNRALSEPIIAAIRAIPDSVPFTAVAPSDGLSSNFGDPVHFDAAAQREYGQRYFDKLGDAVRN 271          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A6H5JM94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM94_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 6.420e-106
Identity = 178/261 (68.20%), Postives = 201/261 (77.01%), Query Frame = 1
Query:   10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGNDQ 792
            VSA   AKR VAGSDV++LMGQSNMSGRGQGYD  IDGPN+PRI+QWSRANT+ITA EHLQH D   + +++ VGMGTAFGRAY ETLPA R+VLLV T +GGT LVNGPWSPGG LFEDAV R EAALAS G  A GNCVAAVLWHQGESDA   V  + Y+S WT MI  LRSR+PAAAEAPV+LG F   W   +     P+L AIRA+PDSV F+ VA +D LS N    +HFDA GQRE+GQRYFDKLGDA+ N Q
Sbjct:  832 VSADYTAKRKVAGSDVILLMGQSNMSGRGQGYDANIDGPNDPRIQQWSRANTVITASEHLQHADFDVVEETR-VGMGTAFGRAYVETLPAKRNVLLVSTGYGGTRLVNGPWSPGGRLFEDAVRRTEAALASNG--ATGNCVAAVLWHQGESDAVAGVDQETYQSTWTNMINTLRSRIPAAAEAPVILGEFTPAWTAEDRARAEPILSAIRAIPDSVPFTVVAPSDGLSSNVDDPVHFDAVGQREYGQRYFDKLGDAVRNSQ 1089          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A0K8P381_IDESA (Acetylxylan esterase related enzyme n=1 Tax=Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6) TaxID=1547922 RepID=A0A0K8P381_IDESA)

HSP 1 Score: 172 bits (436), Expect = 9.330e-49
Identity = 114/272 (41.91%), Postives = 153/272 (56.25%), Query Frame = 1
Query:   10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQ----GYDRAIDGPNNPRIRQWSRANTIITAEEHLQHHDDG-GLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAA---AEAPVVLGGFAQPWVESNPEM-VGPVLGAIRALPDSVKFSAVAAADDLSVNPGQ----TIHFDAAGQREFGQRYFDKLGDAIGN 786
            +SA C  KR VAG DVV+L+GQSNMSG G     G+D       +PRI+QW+ A  +  A + LQH D    +G+   +G G +F RAY   LP  R VLLVP A+ GTA  N  W+PG  LFE AV R  AALAS G    GNC+AA+LW QGESD     G   Y++A   MIG LR+R+ A    A  P +LG F+  W+   P      +L  I   P  ++++AV +   L+ N  Q     +H DA+  R +G+R+++ L  A+ N
Sbjct:   46 ISAACTDKRGVAGYDVVLLIGQSNMSGYGAYIVPGFDTT-----DPRIQQWTMAGGMALASDPLQHPDAPFNVGR---IGPGMSFARAYLAALPTARKVLLVPAAYNGTAFSNRRWNPGDDLFEAAVTRLNAALASDG----GNCLAAILWSQGESDVDTMTGAQ-YQAALDTMIGTLRTRIAAGQGGATVPFLLGQFSPDWIAPAPTPGQQAILDVINGTPGRLRYTAVVSTAGLTSNLTQGLNGAVHLDASSHRIYGRRFYEALPVALAN 304          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A0K1PM06_9DELT (Phage protein n=2 Tax=Labilithrix luteola TaxID=1391654 RepID=A0A0K1PM06_9DELT)

HSP 1 Score: 169 bits (428), Expect = 5.050e-48
Identity = 111/263 (42.21%), Postives = 144/263 (54.75%), Query Frame = 1
Query:   10 VSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWSRANT---IITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAE-TLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786
            + A  AA    +G DV +L GQSNM GRG  +D A+D P+ P I QW R      I+ A   L H+D   L +   VGMG +F +AY E + P  R +LLVPTA GG++     W+PG  LFEDAV R  AA+A+      GN   A LWHQGE+D  ++     Y  A   MIGA R+RV  A+ AP +LG F   W   +P     +  AI A P  V F++VA +  L+ N G  +HFDA  QR +G RY+  L  A  N
Sbjct:   12 LDADVAAPSPSSGYDVFLLAGQSNMVGRGASFDAALDTPH-PAIFQWGRGERDGMIVPAVARLDHNDTALLDR---VGMGLSFAKAYYEASQPTPRPILLVPTARGGSSFSAHQWNPGDPLFEDAVLRGNAAMATD----PGNRFVAFLWHQGENDVGQYDNAT-YSQALDAMIGAFRARVAGASSAPFILGQFCPDW-SPDPAAKASISSAIDATPQRVPFTSVAPSAGLTSNAGDAVHFDAPAQRTYGARYWQALDVARAN 264          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A2E9BQB5_9BURK (Fibronectin type-III domain-containing protein n=1 Tax=Variovorax sp. TaxID=1871043 RepID=A0A2E9BQB5_9BURK)

HSP 1 Score: 148 bits (373), Expect = 2.850e-37
Identity = 104/261 (39.85%), Postives = 136/261 (52.11%), Query Frame = 1
Query:   46 GSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQ---WS-RANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDA-YRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPW--VESNPEMVGP-------VLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYFDKLGDAIGN 786
            G DV +L GQSNM G  + +D  +D P+ PRI Q   W+   N +I A + L H       +   VG+   F RAY   LP  R +LLVP+A GGT      W+PG  LFE AV RA AA+A+  +    N  A +LWHQGE D +      A Y +A    I   R+R+  AA AP++LG F   W  V++     G        ++ AI      V F+AVA++  L   PG  IHF AAGQRE G RYF +L  A+ N
Sbjct:   31 GFDVFLLAGQSNMVGWDKNFDPVLDAPD-PRILQLGFWNDHRNFVIPAIDPLDHPQ-----RDNGVGLAMQFSRAYLNDLPKGRGILLVPSAFGGTGFYQQRWNPGNDLFEQAVERANAAMATHPN----NRFAGILWHQGEDDVRFWGSQPARYAAALDAAIYGFRARIAGAASAPMILGKFTDSWGLVDTTFNAAGETTAAKANIMQAIDETTQRVPFTAVASSTGLPSPPGDPIHFSAAGQREHGLRYFAQLPHALAN 281          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A7W5EAM4_9BURK (SASA domain-containing protein n=1 Tax=Massilia umbonata TaxID=864828 RepID=A0A7W5EAM4_9BURK)

HSP 1 Score: 134 bits (337), Expect = 2.990e-34
Identity = 95/246 (38.62%), Postives = 130/246 (52.85%), Query Frame = 1
Query:   46 GSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQW-SRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVN--GPWSPGGF----LFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEA-PVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVN-PGQTIHFDAAGQREFGQRY 756
            G DVV+L GQSNMSGRG G D   D P + R+  W +RANT+  A + L H D G   +   +G G +FG AY     A R ++LVP A+GGT   +  G W   G     L  +AVARA AA+ +           A+LWHQGE+D    +  +AY +    + G LRS +  A  + P ++G +   ++  +P +   + G  R LP ++  SA   +  LS N P  TIHFDAA QR  G RY
Sbjct:   17 GYDVVLLAGQSNMSGRGLGADPMADTPADARLLAWDARANTLRLARDPLPHQDLGE--RPVRIGPGISFGHAYLARGGAGRQLVLVPAAYGGTGFTDKAGSWRVTGAAVSPLVTEAVARANAAMRAAHARGAPARFVAILWHQGETDGGTRMAPEAYAAELVALAGYLRSHIDGAGPSTPFIVGQYVPAFLAGSPSLQR-IAGINRNLPATLARSACVGSAGLSGNGPSDTIHFDAASQRVLGGRY 259          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: A0A411X0E2_9BURK (SASA domain-containing protein n=2 Tax=Massilia albidiflava TaxID=321983 RepID=A0A411X0E2_9BURK)

HSP 1 Score: 125 bits (315), Expect = 1.510e-30
Identity = 90/246 (36.59%), Postives = 130/246 (52.85%), Query Frame = 1
Query:   46 GSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQW-SRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVN--GPWSPGGF----LFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEA-PVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQ-TIHFDAAGQREFGQRY 756
            G DVV+L GQSNMSGRG G D   D P +PR+  W +RANT+  A + L H D G   +   +G G +FG+AY     A R ++LV  A+GGT   +  G W   G     L  +AVARA AA+ +          AA+LWHQGE+D    +  +AY +    +   LRS +  A  + P ++G +    + ++   +  +    R LP ++  SA   +  LS N  +  +HFDAA QR+ G+RY
Sbjct:   64 GYDVVLLAGQSNMSGRGLGTDPMADTPADPRLLAWDARANTLRLARDPLPHQDRGE--RPVRIGPGISFGQAYLARGSAGRQLVLVAAAYGGTGFSDNAGSWRVTGAAVSPLAAEAVARANAAMRAARARGAPARFAAILWHQGETDGGNRMAPEAYAAELVALATYLRSHIDGAGPSTPFIVGQYVPAHLAAD-RFLQRIADVNRELPATLAHSACVGSHGLSGNSTRDAVHFDAASQRDMGRRY 306          
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Match: N1V2P2_9MICC (SASA domain-containing protein (Fragment) n=1 Tax=Arthrobacter crystallopoietes BAB-32 TaxID=1246476 RepID=N1V2P2_9MICC)

HSP 1 Score: 117 bits (293), Expect = 1.610e-27
Identity = 88/251 (35.06%), Postives = 120/251 (47.81%), Query Frame = 1
Query:   43 AGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQWS----RANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLVPTAHGGTALVNGP---WSPGGF-----LFEDAVARAEAALASGGDEAEGNCVAAVLWHQGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVESNPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQRYF 759
            AGSDVV+L+GQSNM G G  YD  +D      I Q++     A  ++ AE+ L H        +  VG G  F R +    PA R VLLVP A GGT+   G    W P        L   A++  + ALA   +      +AA+LWHQGESDA        YR+   ++I  LR+      + P ++GG    WV  + ++ GP     RA+P     +A       +  PG  IH+ AAG RE G RY+
Sbjct:   69 AGSDVVLLLGQSNMQGAGTPYDPGLD-IRMDGIDQFAGSGPHAGKVLPAEDPLHHVTTYLFNGAASVGPGMEFARQFWLRQPADRRVLLVPAARGGTSFAGGADYSWDPDNTTARVNLAHRAISECKTALALNPNHR----LAAILWHQGESDALPGKSARWYRNKLLQLIDLLRAEF---GQVPFLVGGMVPEWVAWDRKLRGPFDAVHRAIPKDRPLTAFVEGPAGAGLPGDIIHYSAAGARELGLRYY 311          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13975.2974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNJ0_ECTSI7.100e-11568.20SASA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FNI7_ECTSI1.080e-11367.18SASA domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FNI9_ECTSI1.910e-11367.57SASA domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A6H5JM94_9PHAE6.420e-10668.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0K8P381_IDESA9.330e-4941.91Acetylxylan esterase related enzyme n=1 Tax=Ideone... [more]
A0A0K1PM06_9DELT5.050e-4842.21Phage protein n=2 Tax=Labilithrix luteola TaxID=13... [more]
A0A2E9BQB5_9BURK2.850e-3739.85Fibronectin type-III domain-containing protein n=1... [more]
A0A7W5EAM4_9BURK2.990e-3438.62SASA domain-containing protein n=1 Tax=Massilia um... [more]
A0A411X0E2_9BURK1.510e-3036.59SASA domain-containing protein n=2 Tax=Massilia al... [more]
N1V2P2_9MICC1.610e-2735.06SASA domain-containing protein (Fragment) n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13975contigL-elsbetiae_contig13975:2569..4106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score344.0
Seed ortholog evalue6.3e-92
Seed eggNOG ortholog2880.D7FNJ0
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0016787
EggNOG free text desc.Carbohydrate esterase, sialic acid-specific acetylesterase
EggNOG OGs28M03@1,2RGKB@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815550.054582-CDS-L-elsbetiae_contig13975:2568..26251622815550.054582-CDS-L-elsbetiae_contig13975:2568..2625Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13975 2569..2625 +
1691682953.6116657-CDS-L-elsbetiae_contig13975:2568..26251691682953.6116657-CDS-L-elsbetiae_contig13975:2568..2625Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13975 2569..2625 +
1622815550.0681636-CDS-L-elsbetiae_contig13975:3371..41061622815550.0681636-CDS-L-elsbetiae_contig13975:3371..4106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13975 3372..4106 +
1691682953.6221724-CDS-L-elsbetiae_contig13975:3371..41061691682953.6221724-CDS-L-elsbetiae_contig13975:3371..4106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13975 3372..4106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13975.2974.1prot_L-elsbetiae_contig13975.2974.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13975 2569..4106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13975.2974.1

>prot_L-elsbetiae_contig13975.2974.1 ID=prot_L-elsbetiae_contig13975.2974.1|Name=mRNA_L-elsbetiae_contig13975.2974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=264bp
TTPVSAGCAAKRDVAGSDVVVLMGQSNMSGRGQGYDRAIDGPNNPRIRQW
SRANTIITAEEHLQHHDDGGLGKSKDVGMGTAFGRAYAETLPAHRDVLLV
PTAHGGTALVNGPWSPGGFLFEDAVARAEAALASGGDEAEGNCVAAVLWH
QGESDAQRHVGGDAYRSAWTEMIGALRSRVPAAAEAPVVLGGFAQPWVES
NPEMVGPVLGAIRALPDSVKFSAVAAADDLSVNPGQTIHFDAAGQREFGQ
RYFDKLGDAIGNDQ
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mRNA from alignment at L-elsbetiae_contig13975:2569..4106+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13975.2974.1 ID=mRNA_L-elsbetiae_contig13975.2974.1|Name=mRNA_L-elsbetiae_contig13975.2974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1538bp|location=Sequence derived from alignment at L-elsbetiae_contig13975:2569..4106+ (Laminarionema elsbetiae ELsaHSoW15)
ACGACGCCAGTTTCTGCCGGCTGCGCCGCAAAGAGAGACGTCGCCGGTTC TGATGTGGTGAGCAAAAGGAGCGGGTGAGCGGGCAACCTTTGACGTCGCG GCCATGCACTTGGAGCCTACCCTTGTGTGTTCGTTCGTGTTTTGTGCGCA TCGGATGTGATCCTTTGTTTTTTGTTCGGTAAGATAAAAAGACGTGTCGT AGTTTATTTATGTTGCCCCGAAACTGATCGGGTTATACATATGTATGTAG TCCACACAAATAGGTACGACGAAACAAGACCAGCAATAGGAAAAATACCG GTACATTGTAGTCTCGCTTTCTCATGAAGAAAGCTCATTCCCATGTCTCG AGAAAAAGAGCGTTTCCGAACTGGCTGCGCTGCTTTGCGTTCGAATTTGT TGCGGGCCTAGTCCGATGTGTCCCACGCCTTATTGACATTTATCACACAG GTATACCAAACGTTTGCTCACCTGAGCGAAAGTGTATAAGAAGGGAAATA AATAAGCCTCTGCTTGTCGATTGTGAGAGCGCGAGTATAGATTTCGGGCA TTTTGTACGGTTGATGATCGTACGGGATACCTTTCGTTTTCGAAAGCGGT CAGAAGAATGCGGGCTAACATGCGGGCCATGCTCGTTTCACGCACACCCC GCTTTCTCAATCGCTAGCTTGTTGTGGACGTTGTGGACATTGTGGACGCT CTGCTGCCATTTTTACACGCCTGACGACTACCTTCTTATTTCTTCCTATT TTTGCGTGTTGTACATATGTATGTACTTGCCGATGAATAAATTACTTGCA AAGGTCGTGCTGATGGGACAGTCAAACATGAGTGGCCGGGGCCAAGGCTA CGACCGAGCGATCGACGGCCCGAACAACCCGCGCATCAGGCAGTGGTCGC GGGCCAACACGATCATCACCGCGGAGGAACACCTCCAGCACCACGACGAC GGCGGCTTGGGCAAGAGCAAGGACGTGGGCATGGGCACCGCCTTCGGACG CGCCTACGCGGAAACCCTGCCGGCGCACCGGGACGTGCTCCTGGTGCCGA CCGCCCACGGCGGCACGGCGCTGGTCAACGGCCCCTGGTCCCCCGGCGGC TTCCTGTTCGAAGACGCCGTGGCGCGCGCGGAGGCGGCGCTCGCGAGCGG CGGCGACGAGGCGGAGGGGAACTGCGTCGCCGCCGTGCTGTGGCACCAGG GGGAGAGCGACGCGCAGAGGCACGTCGGTGGGGACGCCTACCGGTCGGCC TGGACGGAAATGATTGGCGCGCTGAGGAGCCGCGTCCCCGCGGCGGCGGA GGCCCCGGTCGTTCTCGGCGGGTTCGCGCAGCCCTGGGTGGAGAGCAACC CGGAGATGGTCGGGCCGGTCCTGGGGGCTATTCGAGCCCTCCCCGACAGC GTCAAGTTCTCGGCGGTTGCCGCCGCGGACGACCTCTCGGTCAACCCCGG CCAGACGATCCACTTCGATGCGGCGGGTCAGCGTGAGTTCGGGCAGCGGT ACTTCGACAAGCTCGGCGATGCGATCGGGAACGATCAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13975:2569..4106+

>mRNA_L-elsbetiae_contig13975.2974.1 ID=mRNA_L-elsbetiae_contig13975.2974.1|Name=mRNA_L-elsbetiae_contig13975.2974.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1584bp|location=Sequence derived from alignment at L-elsbetiae_contig13975:2569..4106+ (Laminarionema elsbetiae ELsaHSoW15)
ACGACGCCAGTTTCTGCCGGCTGCGCCGCAAAGAGAGACGTCGCCGGTTC
TGATGTGACGACGCCAGTTTCTGCCGGCTGCGCCGCAAAGAGAGACGTCG
CCGGTTCTGATGTGGTCGTGCTGATGGGACAGTCAAACATGAGTGGCCGG
GGCCAAGGCTACGACCGAGCGATCGACGGCCCGAACAACCCGCGCATCAG
GCAGTGGTCGCGGGCCAACACGATCATCACCGCGGAGGAACACCTCCAGC
ACCACGACGACGGCGGCTTGGGCAAGAGCAAGGACGTGGGCATGGGCACC
GCCTTCGGACGCGCCTACGCGGAAACCCTGCCGGCGCACCGGGACGTGCT
CCTGGTGCCGACCGCCCACGGCGGCACGGCGCTGGTCAACGGCCCCTGGT
CCCCCGGCGGCTTCCTGTTCGAAGACGCCGTGGCGCGCGCGGAGGCGGCG
CTCGCGAGCGGCGGCGACGAGGCGGAGGGGAACTGCGTCGCCGCCGTGCT
GTGGCACCAGGGGGAGAGCGACGCGCAGAGGCACGTCGGTGGGGACGCCT
ACCGGTCGGCCTGGACGGAAATGATTGGCGCGCTGAGGAGCCGCGTCCCC
GCGGCGGCGGAGGCCCCGGTCGTTCTCGGCGGGTTCGCGCAGCCCTGGGT
GGAGAGCAACCCGGAGATGGTCGGGCCGGTCCTGGGGGCTATTCGAGCCC
TCCCCGACAGCGTCAAGTTCTCGGCGGTTGCCGCCGCGGACGACCTCTCG
GTCAACCCCGGCCAGACGATCCACTTCGATGCGGCGGGTCAGCGTGAGTT
CGGGCAGCGGTACTTCGACAAGCTCGGCGATGCGATCGGGAACGATCAGG
TCGTGCTGATGGGACAGTCAAACATGAGTGGCCGGGGCCAAGGCTACGAC
CGAGCGATCGACGGCCCGAACAACCCGCGCATCAGGCAGTGGTCGCGGGC
CAACACGATCATCACCGCGGAGGAACACCTCCAGCACCACGACGACGGCG
GCTTGGGCAAGAGCAAGGACGTGGGCATGGGCACCGCCTTCGGACGCGCC
TACGCGGAAACCCTGCCGGCGCACCGGGACGTGCTCCTGGTGCCGACCGC
CCACGGCGGCACGGCGCTGGTCAACGGCCCCTGGTCCCCCGGCGGCTTCC
TGTTCGAAGACGCCGTGGCGCGCGCGGAGGCGGCGCTCGCGAGCGGCGGC
GACGAGGCGGAGGGGAACTGCGTCGCCGCCGTGCTGTGGCACCAGGGGGA
GAGCGACGCGCAGAGGCACGTCGGTGGGGACGCCTACCGGTCGGCCTGGA
CGGAAATGATTGGCGCGCTGAGGAGCCGCGTCCCCGCGGCGGCGGAGGCC
CCGGTCGTTCTCGGCGGGTTCGCGCAGCCCTGGGTGGAGAGCAACCCGGA
GATGGTCGGGCCGGTCCTGGGGGCTATTCGAGCCCTCCCCGACAGCGTCA
AGTTCTCGGCGGTTGCCGCCGCGGACGACCTCTCGGTCAACCCCGGCCAG
ACGATCCACTTCGATGCGGCGGGTCAGCGTGAGTTCGGGCAGCGGTACTT
CGACAAGCTCGGCGATGCGATCGGGAACGATCAG
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