mRNA_L-elsbetiae_contig1397.2967.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1397.2967.1
Unique NamemRNA_L-elsbetiae_contig1397.2967.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: D7G6L5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L5_ECTSI)

HSP 1 Score: 365 bits (936), Expect = 1.290e-120
Identity = 204/307 (66.45%), Postives = 231/307 (75.24%), Query Frame = 3 
Query:  213 MLGARQLSSLALALCLYHAS-AFAGVVGARGAMRHAVGNGGGGRANAAMPPRAIDGADQQLGGVVRRVRGGAAAPTRRHAVAANLPEGGINSKXXXXXXXXXXXLLASYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLSAAVN 1130
            M+ +RQL SLALALC  HAS AFAGVV  RG         GG  + AA PPRAIDG +QQLG VVRR RGG     RR  VA   P+ G               LLASYLRALD KPI TKV+TSGVICGIGDI+AQAL+FK AATE+ TL + LA LEFKR AIY  LGA+WIAPVVHYWFDALEA   DKKAV G P P FAMRMFKALKMVT+DQ+IGAPL+N+G +FL  F TA+T+G G   +GKKAG++++ G+W TMLVCWK+WP+ANMINFAFVPAKLRVLF+NFVGLGWNIYLSAAVN
Sbjct:    1 MVNSRQLLSLALALCSCHASSAFAGVVTTRG---------GGVPSPAATPPRAIDGVEQQLG-VVRRARGGVLL--RRRGVAVPAPDNG-GLVVESGNKNGGDGLLASYLRALDTKPIITKVVTSGVICGIGDIMAQALAFKTAATESFTLGSFLAALEFKRLAIYGVLGALWIAPVVHYWFDALEAATKDKKAVAGAPAPSFAMRMFKALKMVTLDQTIGAPLINAGFMFLFTFATALTSGAGGIESGKKAGTMVKNGIWSTMLVCWKLWPIANMINFAFVPAKLRVLFLNFVGLGWNIYLSAAVN 294
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: A0A6H5K3K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K4_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 8.410e-93
Identity = 198/422 (46.92%), Postives = 223/422 (52.84%), Query Frame = 3 
Query:  213 MLGARQLSSLALALCLYHA-SAFAGVVGARGAMRHAVGNGGGGRANAAMPPRAIDGADQQLGG----------VVRRVRGGAAAPTRRHAVAANLPEGGINSKXXXXXXXXXXXLLASYLRALDRKPITTKV---ITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYT------------------------------------------------------------------------------------------------------FLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLSAAVN 1130
            M+  RQL SL LALC  HA SAFAGVV  RG         GG  + AA PPRAID  +QQLG           VVRR RGGA    RR  VA   P+                 LLASYLRALD KP+ TKV    TSGVICGIGDI+AQAL+FK AATE+ +L + LA LEFKR AIY                                                                                                        LGA+WIAPVVHYWFD LEA F DKKAVPG P P F+ RM KALKMV +DQ IGAPLVN+G +FL  F TA+T+GTG   +GKKAG +++ G+WGTMLVCWK+WP+ANMINF +VP KLRVLFMNFVGLGWNIYLSAAVN
Sbjct:    1 MVNCRQLLSLVLALCSCHACSAFAGVVTTRG---------GGVPSPAATPPRAIDSVEQQLGEESLSRWNETCVVRRARGGALL--RRRGVAVPAPDQS-GLVVESGDKNGADGLLASYLRALDTKPLITKVYQVFTSGVICGIGDIMAQALAFKTAATESFSLGSFLAALEFKRLAIYGETCLRVLPRMGIFSRLFSFCLGSSGRGVIHRHLYLRWCRERKIYRWRINKLEVEETRVEFQEEMAVNDKKFSELIEAMGTPKDAKGRDQAGSRNHRRVGKAGVLGALWIAPVVHYWFDTLEAAFKDKKAVPGAPAPSFSTRMVKALKMVILDQGIGAPLVNAGFMFLFTFATALTSGTGGIESGKKAGIMVKNGIWGTMLVCWKLWPIANMINFLYVPVKLRVLFMNFVGLGWNIYLSAAVN 410
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: D6PWV8_9PHAE (PXMP2/4 family protein 2 (Fragment) n=5 Tax=Fucus TaxID=3011 RepID=D6PWV8_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 1.700e-71
Identity = 120/199 (60.30%), Postives = 145/199 (72.86%), Query Frame = 3 
Query:  522 LLASYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLS 1118
            +L  YLR LDR+P+ TK+ITSGVIC IGD++AQALSF  +A     L +    LEFKR AIY  LGAVW+AP+ HYWFDALE  F         P   F  +M KALKMVTVDQ IGAP+VN+G +FL    TA+ +GT P  A KKAG  +R+ + GTMLVCW++WPVAN+INFA+VP KLRVLF+NFVGLGWNI+LS
Sbjct:   18 VLNKYLRVLDRRPLETKMITSGVICAIGDVVAQALSFSNSAVTPNNLRSFANALEFKRLAIYGALGAVWVAPLCHYWFDALEDFFKGDN----NPLDTFKGKMIKALKMVTVDQGIGAPVVNAGFMFLFTLATAMVSGTSPTSAFKKAGRFVRDNIKGTMLVCWRLWPVANLINFAYVPPKLRVLFLNFVGLGWNIFLS 212
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: A0A835YM13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM13_9STRA)

HSP 1 Score: 155 bits (391), Expect = 1.290e-40
Identity = 83/202 (41.09%), Postives = 124/202 (61.39%), Query Frame = 3 
Query:  534 YLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKA--VPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSL-LREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLSAAVN 1130
            Y+  L+R+P+ TK+ T+ +IC +GD+  QA+        A +L AL    + KR  +Y  +GA+++AP+ HYW+ AL++      A  V G   P  A R+  ALKM+ +DQ+I +P+VNSG LF     T +  G+G FGA   +GS  ++  LW T++  WKIWP AN +NF FVP +LR LF++ VG+ WN+ LS+  N
Sbjct:   18 YMAILERRPLYTKMATNYLICFLGDVSCQAMG-------AGSLRALSRAFDVKRAVLYGSMGALYLAPLAHYWYGALDSAIVKTPAGQVDGAEKPSTATRVTGALKMLFIDQAIASPIVNSGFLFAYAAFTGLAGGSG-FGAALHSGSAKVQSALWPTLVASWKIWPAANFLNFMFVPLQLRALFLSVVGVAWNLVLSSIAN 211
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: D8LBZ3_ECTSI (Fungal-optimized enhanced green fluorescent protein/peroxisomal membrane protein A fusion protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ3_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 4.800e-35
Identity = 99/166 (59.64%), Postives = 109/166 (65.66%), Query Frame = 3 
Query:  213 MLGARQLSSLALALCLYHAS-AFAGVVGARGAMRHAVGNGGGGRANAAMPPRAIDGADQQLGGVVRRVRGGAAAPTRRHAVAANLPEGGINSKXXXXXXXXXXXLLASYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIY 707
            M+ +RQL SLALALC  HAS AFAGVV  RG         GG  + AA PPRAIDG +QQLG VVRR RGG     RR  VA   P+ G               LLASYLRALD KPI TKV+TSGVICGIGDI+AQAL+FK AATE+ TL + LA LEFKR AIY
Sbjct:    1 MVNSRQLLSLALALCSCHASSAFAGVVTTRG---------GGVPSPAATPPRAIDGVEQQLG-VVRRARGGVLL--RRRGVAVPAPDNG-GLVVESGNKNGGDGLLASYLRALDTKPIITKVVTSGVICGIGDIMAQALAFKTAATESFTLGSFLAALEFKRLAIY 153
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: A0A836CMN9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMN9_9STRA)

HSP 1 Score: 106 bits (265), Expect = 3.000e-22
Identity = 72/214 (33.64%), Postives = 110/214 (51.40%), Query Frame = 3 
Query:  534 YLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAG---TGPFGAGKKA----GSLLREG-----------LWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLSA 1121
            YL  L R+P+ TK++TS ++CG+GD + Q L+       A    AL   L+F+R  +Y+ +G +++AP +                VPG       ++  KAL M  +D ++ +PL+N G L++      + +G   TG  GAG +      +L+R             LW T+L  WK+WP+AN  NF  VP  LRVL++N VGL W+  LSA
Sbjct:   83 YLATLKRRPLPTKMVTSAIVCGLGDAICQMLT-------AGGFGALRHALDFRRLVLYSTMGGLYVAPDM----------------VPGKVT---LVKAKKALNMTFID-TLASPLINGGFLYVFTAANCLASGAAVTGAAGAGLEKLQVLANLMRIANLNNIVDKNTCLWPTLLASWKMWPLANFFNFLLVPPHLRVLYLNVVGLVWHTVLSA 269
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: A0A7S2SVB6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVB6_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.270e-19
Identity = 71/210 (33.81%), Postives = 107/210 (50.95%), Query Frame = 3 
Query:  534 YLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGT-----GPFGAG-KKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLSAAVN*GVGG 1145
            Y R L+++PI TK+ T  VI  IGDILAQ ++ K    +          +   ++++  FL   ++ P +HYWF+ ++  +  K      P      +  + L    VDQ++G   +N G  F    +     GT        G G +K  SL+    W T+L  W++WP+AN +NF FVP K RVLF NFV + W+IYLS  ++ G GG
Sbjct:   79 YDRQLEKRPIFTKMWTCLVIGAIGDILAQRITTKFVDMD---------PMRIFQYSVAQFL---FLGPSLHYWFNFID--YVGKL-----PAIAKLKKSVRVLVQTFVDQTVGVVTINGGFFFFFAVLQNTLDGTLFPLTRTLGQGWEKITSLM----WVTLLANWRLWPLANWVNFQFVPLKYRVLFSNFVAVFWSIYLSVVMH-GKGG 264
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: A0A8K1FHE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHE6_PYTOL)

HSP 1 Score: 97.8 bits (242), Expect = 2.190e-19
Identity = 69/196 (35.20%), Postives = 95/196 (48.47%), Query Frame = 3 
Query:  531 SYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLS 1118
            SY R L+ KP+TTKV+T+  I G+GD+  Q   F +  ++          L+ KR AI+TFLG V +AP++H W+  +         +PG       +     LK + +DQ   AP       FL  F T +    G     +     +R   W T    W +W  A +INF FVP  L+VLF NFVG  WN YLS
Sbjct:   47 SYSRLLETKPVTTKVVTACTIAGLGDVTCQ---FIIEKSD---------KLDVKRTAIFTFLGGVVVAPILHVWYRFMST------TIPG-------LGTQAVLKRLAMDQLGFAPT------FLPIFFTMLLTLEG---VPETIPEKVRTEWWPTTKANWVVWVPAQLINFRFVPGNLQVLFANFVGFFWNSYLS 208
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: A0A388JVN7_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JVN7_CHABU)

HSP 1 Score: 94.7 bits (234), Expect = 5.810e-19
Identity = 61/195 (31.28%), Postives = 96/195 (49.23%), Query Frame = 3 
Query:  522 LLASYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWN 1106
            L   Y+RAL R+P+ TK++TSG + G+ D +AQ    K++ T+++ L          R A+    G +W+ P  HYW +  E+ F+ ++                 ++ V V+Q    P+ N  ++    ++  I  G     A     S +R  L    +  WKIWP+A +IN  FVP +LRVLFMN V L W+
Sbjct:   10 LWRKYVRALRRRPLRTKMLTSGTLMGVSDAMAQ----KISGTDSIKL---------WRTALMALYGLLWVGPTGHYWHEVCESFFSKRRD------------NATVIRKVAVEQLTYGPVQNVSMMI---YLGLIIKGK----AWNTVVSKIRADLLRVQVAAWKIWPLAALINHKFVPIQLRVLFMNLVALFWS 172
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BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Match: I7MJ57_TETTS (Mpv17/PMP22 family protein n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7MJ57_TETTS)

HSP 1 Score: 93.6 bits (231), Expect = 1.640e-18
Identity = 66/199 (33.17%), Postives = 99/199 (49.75%), Query Frame = 3 
Query:  522 LLASYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTLAALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPPRFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKKAGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIYLS 1118
            +   Y   L + P++TK +TSG + G+GD + Q +  +  A              F+R A   F+G+V+ APV+H W+  L  GF ++      P      ++ K L  +  DQ+I A         +V +V         + + +K  + ++E    TM+  WK+WP A MINF+ VP   RVLF NFVGL WNIYLS
Sbjct:    3 IFKGYNNLLTKYPLSTKCVTSGFMFGLGDAICQLVFEENKAYN------------FRRTANIAFVGSVFAAPVLHKWYGFLP-GFCERNIFYKYPKMG---QISKTLIPMAFDQTIFAFSFTCYFFMVVNYVE--------YQSIEKGITSIKEKSLETMIANWKLWPAAQMINFSIVPIPYRVLFANFVGLIWNIYLS 177
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1397.2967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6L5_ECTSI1.290e-12066.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K3K4_9PHAE8.410e-9346.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D6PWV8_9PHAE1.700e-7160.30PXMP2/4 family protein 2 (Fragment) n=5 Tax=Fucus ... [more]
A0A835YM13_9STRA1.290e-4041.09Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LBZ3_ECTSI4.800e-3559.64Fungal-optimized enhanced green fluorescent protei... [more]
A0A836CMN9_9STRA3.000e-2233.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SVB6_9STRA1.270e-1933.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1FHE6_PYTOL2.190e-1935.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A388JVN7_CHABU5.810e-1931.28Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
I7MJ57_TETTS1.640e-1833.17Mpv17/PMP22 family protein n=1 Tax=Tetrahymena the... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1397contigL-elsbetiae_contig1397:1775..6311 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.3
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D7G6L5
KEGG koko:K13347,ko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-00_009890.1
Exons5
Model size1511
Cds size921
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1397.2967.1prot_L-elsbetiae_contig1397.2967.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1397 2196..6099 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.731009-UTR-L-elsbetiae_contig1397:1774..21521622815549.731009-UTR-L-elsbetiae_contig1397:1774..2152Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1397 1775..2152 -
1691682953.4514406-UTR-L-elsbetiae_contig1397:1774..21521691682953.4514406-UTR-L-elsbetiae_contig1397:1774..2152Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1397 1775..2152 -
1622815549.781386-UTR-L-elsbetiae_contig1397:6099..63111622815549.781386-UTR-L-elsbetiae_contig1397:6099..6311Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1397 6100..6311 -
1691682953.4941282-UTR-L-elsbetiae_contig1397:6099..63111691682953.4941282-UTR-L-elsbetiae_contig1397:6099..6311Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1397 6100..6311 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815549.7410483-CDS-L-elsbetiae_contig1397:2195..24361622815549.7410483-CDS-L-elsbetiae_contig1397:2195..2436Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 2196..2436 -
1691682953.4615226-CDS-L-elsbetiae_contig1397:2195..24361691682953.4615226-CDS-L-elsbetiae_contig1397:2195..2436Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 2196..2436 -
1622815549.7502751-CDS-L-elsbetiae_contig1397:3253..35731622815549.7502751-CDS-L-elsbetiae_contig1397:3253..3573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 3254..3573 -
1691682953.469722-CDS-L-elsbetiae_contig1397:3253..35731691682953.469722-CDS-L-elsbetiae_contig1397:3253..3573Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 3254..3573 -
1622815549.7618198-CDS-L-elsbetiae_contig1397:4577..47561622815549.7618198-CDS-L-elsbetiae_contig1397:4577..4756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 4578..4756 -
1691682953.4779508-CDS-L-elsbetiae_contig1397:4577..47561691682953.4779508-CDS-L-elsbetiae_contig1397:4577..4756Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 4578..4756 -
1622815549.7715776-CDS-L-elsbetiae_contig1397:5918..60991622815549.7715776-CDS-L-elsbetiae_contig1397:5918..6099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 5919..6099 -
1691682953.486084-CDS-L-elsbetiae_contig1397:5918..60991691682953.486084-CDS-L-elsbetiae_contig1397:5918..6099Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1397 5919..6099 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1397.2967.1

>prot_L-elsbetiae_contig1397.2967.1 ID=prot_L-elsbetiae_contig1397.2967.1|Name=mRNA_L-elsbetiae_contig1397.2967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp
MLGARQLSSLALALCLYHASAFAGVVGARGAMRHAVGNGGGGRANAAMPP
RAIDGADQQLGGVVRRVRGGAAAPTRRHAVAANLPEGGINSKSNKSGGGG
GGGLLASYLRALDRKPITTKVITSGVICGIGDILAQALSFKLAATEAVTL
AALLATLEFKRFAIYTFLGAVWIAPVVHYWFDALEAGFADKKAVPGGPPP
RFAMRMFKALKMVTVDQSIGAPLVNSGILFLVPFVTAITAGTGPFGAGKK
AGSLLREGLWGTMLVCWKIWPVANMINFAFVPAKLRVLFMNFVGLGWNIY
LSAAVN*
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mRNA from alignment at L-elsbetiae_contig1397:1775..6311-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1397.2967.1 ID=mRNA_L-elsbetiae_contig1397.2967.1|Name=mRNA_L-elsbetiae_contig1397.2967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4537bp|location=Sequence derived from alignment at L-elsbetiae_contig1397:1775..6311- (Laminarionema elsbetiae ELsaHSoW15)
TAAATATGTATATACTAAACGTACGTGCAGGTAAGAATGACGTATGTTGT
ACATATATGCATACATAGGTATTTTTGTGGAAAATATAATTACGCCTCCT
GTTATTTTCGGGGAGATTGGAGTTTGCCTCCCCCCCCTCCTTCCTGCCCT
CTGCCTAGCTCTGCCCTGCCCCCGTTCGCAGCAAAGTGCCATTTGGAATA
CGCAACACGATCATGCTCGGTGCCCGACAGCTAAGCTCTCTGGCACTAGC
GCTTTGCCTGTACCATGCTTCGGCTTTCGCGGGCGTGGTCGGCGCACGTG
GAGCGATGAGACATGCTGTTGGCAACGGCGGTGGTGGGCGGGCGAACGCA
GCTATGCCGCCGCGGGCTATCGATGGGGCCGACCAGCAGCTCGGTGAGAA
GTCGCTATCCTCTCTCTTGGTTTTACGGGCTACTGCTGATTCGAGCACGC
GATGCATCTCTCCTCTCTGCCGTTGTTTGAGGAACGGTGGTCGGGTGGAG
ATGGCGTGCATGATCAGTTGTTGTGTCACATGCAGAGAACGAGTGGGCGA
ATACGTACTAACATACGCATGTATCTCGCCTACTTTCATATCCAAACATC
CACCACCACGAACGCGGTGTGAGAATATTGGGCTCGCGAATGACTAATGG
CGGTCGTTTTTACACACGCTGATTTTCATGTAAAGATATTTAGGTAGTAC
ACAGCACATAAGACTAGTCTACACACCTCCCACAGGCTTGAGCATACACA
GCGCGTGCTCGAGTCAGAGCGCGTGCTCCAGGTACGAACTGGTGTAAGTT
ATGGATCTTCTCTTTGGTGTCGACAATATATATATATCACGTAGCGTATG
TAGGCTATGTACTTGCAGCAGAAGAACGGCTCGTGGGCAACGGCAAGGAG
CCTGGGTTACACTGATAGGGACTCTTTAACTCTAACTGCCAGAACGTGGT
CCCGCACACACGCTTGACCAATCAGAGGGCGCGTATGGCGTAGTCCTAAA
GATCCCCTATATCAGGGTGTAAACGTGTAAACACAGTAGTACTGACGGCA
AGGGTCGCCGAACCGTACATGTAGACTAGATATCGACAAATGTACTCTCT
TAGAGAAATAGCTAGGAGTGTTCACATCGCCTGATCAATGCACACGGCGG
TACGTATATACACACGGTAGGCGCAAAACTAGGCGCCAATTAGGTCCAAA
TAAGCCAAGTACACGAAGTCATGAGAGTTATCAGAAACGCATTCAGAGAG
TCTCAAGTACCCCGTCGACGTTCCGTTTATCCGTTTTCTTGGTGTCACCC
CCTTCCGGCCCGGTGTTTCTCTTGACGGAACGCTTGTGAACCTGAATCCG
GGGGCCCAGAGATGCTGCATTTGGTCGGGTCCCCACAGGAGGGCTCCTGT
ACCCAGCCAGCTCGACCGTCGGAAGAATACAAACGCCTCAAGAACCCAAA
AATAGAAAAGAATGGTACACTTCGAAGTAACTCAACACCGGTCTGTCTGT
CCTCTCTCTCTCTCTCTCTCTCTCTTGTTCTCTTGTCCCTTTTTCGTTTT
TGAAGGTGGTGTCGTAAGGCGAGTGCGCGGAGGCGCCGCCGCCCCCACCC
GCAGACACGCGGTTGCCGCCAACCTGCCGGAGGGCGGCATTAACTCCAAG
TCCAACAAGAGCGGCGGCGGCGGCGGCGGCGGTCTCCTTGCCTCCTACCT
GCGCGCCCTCGACCGCAAACCCATCACCACCAAGGTTGGCCGGCCCGCGT
GCGCTCTCTGAGGGTTTCCCGAATATTTAGATGGGGTCTCGCAAACTTAA
TTTTTCCGCTTGCACTTATGCATGCATGTAATATATGTACTTCTAAATAT
TGCAATATATATGTTTGTACTTGGAGTATGTTTGCATGGTCGCATGGGTC
TGCGGGCAGGCAGCGTCAGCGGTGCATCGATGGGATGGATTGTTGTTGTT
GTTGTTGTTGTTGTTGTTATTGTTTTGACATAAAAAAAAAACGTTCGTTC
CGATCTCTCTATAATCCAGTACCTCCATGAGTCCGTACGAATCCAACCTT
GGCGCGGTCGACTCCCGTTGTCACAGGATAACTTAACTTGCCCTATATAT
GCCACCGTCCGTACATTTTTCGTTGGGGTATGTGTACCCATGCTGCTGTC
GGGGGACAGCGACACTACCGATGAAGAGCGACGACGACGGCGGTCGGTGT
GTCCCAGCCTTAAGACCTTCTGGAAAGAAACAACACCTCTCAGCCGTGCC
CTCTCTCTCTTTCTCTCTCTCTCTCTCTCTGTGTGTGTGTTTTCTATCTC
TCTTATTTTCGCTCGACGCGTCAGCGCCGTGAACGCAGCAAACACCCGGA
TGTCGAGGAAAAAAACCACAGCCAGACAGACAGCCAGCCACCTAAAAAAC
CAAAATCGAAACAATCCCCGGTGTTTGCCGTCCCCCTTCCACGCGCGCGC
GTGTGTGTGTGTGCCTATGTCGGGTATTTACAAAACGTACATGTTTTTCA
TACGCGCTTTTATTTTATTTGCATATTTAGGTTCATATTTAGGCTTCCTG
CAATAGAGCCAGCCCCCAATTCTGAAAAAGAGCTGTGGGGGGTATTATCT
AGGAAATAGAGGGAAAAGTCCCCCACAGTGCCACTTTTTCAGAATGGGGG
GCCCGCCATTCTGCAGGAAGCCTACATATGTAAACGTAACACACACACAT
CGTGCGTGCGTGCATTCGCGACAAAAATAAAAAAAAAGGTCATCACCTCC
GGGGTCATCTGCGGCATCGGCGACATCCTCGCGCAAGCGCTGTCCTTCAA
GCTGGCGGCGACGGAGGCGGTCACCCTCGCGGCCCTCCTGGCGACCCTCG
AGTTCAAGAGGTTCGCCATCTACACGTTCCTGGGGGCCGTGTGGATCGCC
CCCGTGGTGCACTACTGGTTCGACGCGCTCGAGGCCGGGTTCGCTGACAA
GAAGGCGGTGCCCGGGGGCCCGCCCCCCCGCTTCGCCATGAGGATGTTCA
AGGCGCTCAAGATGGTCACGGTGGACCAGTCCATCGGCGCTCCTCTGGTG
AACTCGGGGTGAGTTTTTTCGGCCGCGGCCTGGCTTTGGGCGATGGCCTG
GCTTGGCCTGGCCTGGCCTTTGGCTGCGAGGGGGAGGAGGGAGGGGCTGG
CTAGCTGACTGAATGAAGCCTGGGGGTAGGGGGCGGGGCACGAGGACGGG
GCTTACGTAGTTCCAGTTTAAGTATTTTTAGGGGGGGGGGGGGGGGTTGT
TGGAAGCTTGGAGTGTGGAGGCTAGAGGCTGGTGGGGTTGGCGTGCGTGC
GCGTAAGTTGGGCAGCTACATACAGCAGTATGCTGTTGTGTGCAGGTGAA
TAATAGCATGCCCAATGTGAGTCGGTTGTTCGTGTATGTATTAGGTGCAT
GTATGGTAGCTGGCTGCTGCTGCTGATGCTGCTGCTGATGCTGCTGATGC
TGCTGCTGATGCTGCTTCGGCTGAGTGTTTTTAGTTCGGTTACGAGTTTG
AGCTATTTAGCTGTGTACCACAAAAAAGTAGATGGGAAACTATTGTGAGC
GAGCGTAACGTTGCTTGGGTCTTCTGCTGCTCCGATCTATCAATTCTTCC
TCCAAAATACACGCTGCACGAGCTTTTAGCTACATGCATAGCCCTCTCTC
TCTCTCTCTCTACATAAGCAGGCAACGCGGCGCCACCGTCCCGCATACTA
GCTTTCCCTTTTCCACCTCGCACGACATGGCATGCGGCCTCACTCACTCA
CTTTTGTGCAGCATGCCCGGTCTCAGGCCCGGCCCGCACCTCTCCTCGGC
ACGTACATACTGACCCCCCCGCCCCCCCCCCACCCCCCACCCCCACGCAC
GCGCACCCCCACCCCCACCCCCCAGTATCCTCTTCCTGGTCCCGTTCGTG
ACCGCCATCACGGCGGGCACCGGTCCTTTCGGCGCCGGGAAGAAGGCCGG
GTCCTTGCTGAGGGAAGGGCTGTGGGGGACGATGCTGGTGTGCTGGAAGA
TCTGGCCGGTGGCGAACATGATCAACTTCGCCTTCGTGCCGGCCAAGCTG
CGGGTGCTCTTCATGAACTTCGTGGGGCTGGGGTGGAACATTTATCTGTC
TGCCGCCGTCAACTAAGGGGTGGGGGGGGATCTGGGGGGGGGCGACCACG
ACCACCTACTGTTTTTTTTTGTGTAAGGGCTTTTTTTTTTTTTTGTAGTT
TGGGTGGGTTGTTTTTTTGTTTGCGGGCATCGATCGGGGATCAGCGAGTG
TGTTTTTGGGCGGCGGCAGAGGCAGTGGCAGGCGTGCGGTTGCGTTTGGG
CGGCAGATATAACCCGTCCGACTTGCAGAGCGGCGTTTTTGGCGACAGCA
GTAGTGACAATCATCGGAGGTCGATCGCGTCGGAGCCTTTTCCTTGGGAC
CGCTCTAGCGTCCTGTTCCCAGCAACCGCACGCCGCGAAGTCTTGGAAGC
CATATAGGTTGTCGGTCGACTGATCGAGTGAGTATACGGTCGGGTTGGTT
TGCGGCCCACTACTGTTCTTGACTGTTTGGGACCCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1397:1775..6311-

>mRNA_L-elsbetiae_contig1397.2967.1 ID=mRNA_L-elsbetiae_contig1397.2967.1|Name=mRNA_L-elsbetiae_contig1397.2967.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1397:1775..6311- (Laminarionema elsbetiae ELsaHSoW15)
ATGCTCGGTGCCCGACAGCTAAGCTCTCTGGCACTAGCGCTTTGCCTGTA
CCATGCTTCGGCTTTCGCGGGCGTGGTCGGCGCACGTGGAGCGATGAGAC
ATGCTGTTGGCAACGGCGGTGGTGGGCGGGCGAACGCAGCTATGCCGCCG
CGGGCTATCGATGGGGCCGACCAGCAGCTCGATGCTCGGTGCCCGACAGC
TAAGCTCTCTGGCACTAGCGCTTTGCCTGTACCATGCTTCGGCTTTCGCG
GGCGTGGTCGGCGCACGTGGAGCGATGAGACATGCTGTTGGCAACGGCGG
TGGTGGGCGGGCGAACGCAGCTATGCCGCCGCGGGCTATCGATGGGGCCG
ACCAGCAGCTCGGTGGTGTCGTAAGGCGAGTGCGCGGAGGCGCCGCCGCC
CCCACCCGCAGACACGCGGTTGCCGCCAACCTGCCGGAGGGCGGCATTAA
CTCCAAGTCCAACAAGAGCGGCGGCGGCGGCGGCGGCGGTCTCCTTGCCT
CCTACCTGCGCGCCCTCGACCGCAAACCCATCACCACCAAGGTGGTGTCG
TAAGGCGAGTGCGCGGAGGCGCCGCCGCCCCCACCCGCAGACACGCGGTT
GCCGCCAACCTGCCGGAGGGCGGCATTAACTCCAAGTCCAACAAGAGCGG
CGGCGGCGGCGGCGGCGGTCTCCTTGCCTCCTACCTGCGCGCCCTCGACC
GCAAACCCATCACCACCAAGGTCATCACCTCCGGGGTCATCTGCGGCATC
GGCGACATCCTCGCGCAAGCGCTGTCCTTCAAGCTGGCGGCGACGGAGGC
GGTCACCCTCGCGGCCCTCCTGGCGACCCTCGAGTTCAAGAGGTTCGCCA
TCTACACGTTCCTGGGGGCCGTGTGGATCGCCCCCGTGGTGCACTACTGG
TTCGACGCGCTCGAGGCCGGGTTCGCTGACAAGAAGGCGGTGCCCGGGGG
CCCGCCCCCCCGCTTCGCCATGAGGATGTTCAAGGCGCTCAAGATGGTCA
CGGTGGACCAGTCCATCGGCGCTCCTCTGGTGAACTCGGGGTCATCACCT
CCGGGGTCATCTGCGGCATCGGCGACATCCTCGCGCAAGCGCTGTCCTTC
AAGCTGGCGGCGACGGAGGCGGTCACCCTCGCGGCCCTCCTGGCGACCCT
CGAGTTCAAGAGGTTCGCCATCTACACGTTCCTGGGGGCCGTGTGGATCG
CCCCCGTGGTGCACTACTGGTTCGACGCGCTCGAGGCCGGGTTCGCTGAC
AAGAAGGCGGTGCCCGGGGGCCCGCCCCCCCGCTTCGCCATGAGGATGTT
CAAGGCGCTCAAGATGGTCACGGTGGACCAGTCCATCGGCGCTCCTCTGG
TGAACTCGGGTATCCTCTTCCTGGTCCCGTTCGTGACCGCCATCACGGCG
GGCACCGGTCCTTTCGGCGCCGGGAAGAAGGCCGGGTCCTTGCTGAGGGA
AGGGCTGTGGGGGACGATGCTGGTGTGCTGGAAGATCTGGCCGGTGGCGA
ACATGATCAACTTCGCCTTCGTGCCGGCCAAGCTGCGGGTGCTCTTCATG
AACTTCGTGGGGCTGGGGTGGAACATTTATCTGTCTGCCGCCGTCAACTA
ATATCCTCTTCCTGGTCCCGTTCGTGACCGCCATCACGGCGGGCACCGGT
CCTTTCGGCGCCGGGAAGAAGGCCGGGTCCTTGCTGAGGGAAGGGCTGTG
GGGGACGATGCTGGTGTGCTGGAAGATCTGGCCGGTGGCGAACATGATCA
ACTTCGCCTTCGTGCCGGCCAAGCTGCGGGTGCTCTTCATGAACTTCGTG
GGGCTGGGGTGGAACATTTATCTGTCTGCCGCCGTCAACTAA
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