prot_L-elsbetiae_contig13909.2938.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13909.2938.1
Unique Nameprot_L-elsbetiae_contig13909.2938.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length48
Homology
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A6H5JH71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH71_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 1.570e-19
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 EADLGETVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARG 46
            ++ L +TVR VGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWD+ARG
Sbjct:  401 DSGLSDTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARG 446          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: D7FXT3_ECTSI (TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXT3_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.860e-19
Identity = 39/46 (84.78%), Postives = 43/46 (93.48%), Query Frame = 0
Query:    1 EADLGETVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARG 46
            ++ L +TVR VGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWD+ARG
Sbjct:  419 DSGLADTVRLVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARG 464          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A835YMV1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV1_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 4.180e-10
Identity = 24/36 (66.67%), Postives = 31/36 (86.11%), Query Frame = 0
Query:    8 VRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDM 43
            VR VGH++P+Y +SW+PD RFLL+ GGDG VRLWD+
Sbjct:  424 VRLVGHTKPIYSLSWAPDSRFLLTGGGDGVVRLWDL 459          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A1E4TCQ6_9ASCO (LisH domain-containing protein n=1 Tax=Tortispora caseinolytica NRRL Y-17796 TaxID=767744 RepID=A0A1E4TCQ6_9ASCO)

HSP 1 Score: 57.8 bits (138), Expect = 1.780e-8
Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 0
Query:    1 EADLGETVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARGAA 48
            +A+   T RF+GHS PVYGV++SPDGR++ SA  D  VRLW +  G A
Sbjct:  466 DAENTSTWRFIGHSGPVYGVNFSPDGRYVASASEDKTVRLWSVETGTA 513          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A7Y5V1Y3_9CHLR (TIR domain-containing protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Y5V1Y3_9CHLR)

HSP 1 Score: 56.2 bits (134), Expect = 6.240e-8
Identity = 24/43 (55.81%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    5 GETVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARGA 47
            GE  R+VGH+  + G+++SPDGR++LSAG D  VR+WD A GA
Sbjct:  856 GEVRRYVGHTDTIAGMTFSPDGRWMLSAGYDDSVRVWDAATGA 898          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A7S0HK76_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HK76_9CRYP)

HSP 1 Score: 54.3 bits (129), Expect = 1.300e-7
Identity = 19/35 (54.29%), Postives = 27/35 (77.14%), Query Frame = 0
Query:   12 GHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARG 46
            GH + +Y VSWSPDGRF+ +AG DG +++WD  +G
Sbjct:   69 GHEEAIYSVSWSPDGRFVQTAGSDGAIKIWDWRKG 103          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A150GP73_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GP73_GONPE)

HSP 1 Score: 53.9 bits (128), Expect = 4.090e-7
Identity = 23/36 (63.89%), Postives = 26/36 (72.22%), Query Frame = 0
Query:   11 VGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARG 46
            VGH  PV  V+WSPDGR +  AGGDG VRLW+ A G
Sbjct: 1128 VGHMGPVNAVAWSPDGRLIAGAGGDGTVRLWEAATG 1163          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A7S4NIX0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4NIX0_GUITH)

HSP 1 Score: 53.1 bits (126), Expect = 7.610e-7
Identity = 19/35 (54.29%), Postives = 28/35 (80.00%), Query Frame = 0
Query:   12 GHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARG 46
            GH++ +Y VSWSPDGR +L+AG DG +++WD  +G
Sbjct:   56 GHAEAIYAVSWSPDGRSVLTAGSDGEIKIWDWRKG 90          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A7R8W5E2_9CRUS (Hypothetical protein n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W5E2_9CRUS)

HSP 1 Score: 53.1 bits (126), Expect = 7.630e-7
Identity = 25/42 (59.52%), Postives = 28/42 (66.67%), Query Frame = 0
Query:    2 ADLGETVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDM 43
            ADL + +    HS  VYGVSWSPDGR LLS  GD   RLWD+
Sbjct:  221 ADLVQEIGSPAHSGGVYGVSWSPDGRQLLSCSGDKTCRLWDV 262          
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Match: A0A0E9NFN2_SAICN (LisH domain-containing protein n=2 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NFN2_SAICN)

HSP 1 Score: 52.8 bits (125), Expect = 1.040e-6
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 0
Query:    7 TVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDM 43
            T R +GHS PVYGVS+SPD ++LLS   D  VRLW M
Sbjct:  380 TRRMIGHSGPVYGVSFSPDSKYLLSCSEDKSVRLWSM 416          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13909.2938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH71_9PHAE1.570e-1984.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXT3_ECTSI1.860e-1984.78TFIID and SAGA subunit n=1 Tax=Ectocarpus siliculo... [more]
A0A835YMV1_9STRA4.180e-1066.67WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A1E4TCQ6_9ASCO1.780e-854.17LisH domain-containing protein n=1 Tax=Tortispora ... [more]
A0A7Y5V1Y3_9CHLR6.240e-855.81TIR domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A7S0HK76_9CRYP1.300e-754.29Hypothetical protein (Fragment) n=1 Tax=Hanusia ph... [more]
A0A150GP73_GONPE4.090e-763.89Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A7S4NIX0_GUITH7.610e-754.29Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7R8W5E2_9CRUS7.630e-759.52Hypothetical protein n=1 Tax=Cyprideis torosa TaxI... [more]
A0A0E9NFN2_SAICN1.040e-662.16LisH domain-containing protein n=2 Tax=Saitoella c... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 3..42
e-value: 1.3E-9
score: 47.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 10..42
e-value: 4.6E-10
score: 39.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 10..48
score: 17.794
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..48
e-value: 7.5E-15
score: 56.7
NoneNo IPR availablePANTHERPTHR19879TRANSCRIPTION INITIATION FACTOR TFIIDcoord: 7..47
IPR037783Transcription initiation factor TFIID subunit 5PANTHERPTHR19879:SF1CANNONBALL-RELATEDcoord: 7..47
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 29..43
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 10..48
score: 15.9
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 9..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13909contigL-elsbetiae_contig13909:339..482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13909.2938.1mRNA_L-elsbetiae_contig13909.2938.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13909 339..482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13909.2938.1 ID=prot_L-elsbetiae_contig13909.2938.1|Name=mRNA_L-elsbetiae_contig13909.2938.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=48bp
EADLGETVRFVGHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDMARGAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR037783Taf5
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf