prot_L-elsbetiae_contig13880.2921.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig13880.2921.1
Unique Name	prot_L-elsbetiae_contig13880.2921.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	251

Homology

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: D7G7B4_ECTSI (Cobalamin synthesis protein, P47K n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7B4_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 1.730e-42
Identity = 122/270 (45.19%), Postives = 144/270 (53.33%), Query Frame = 0

Query:    1 MTPCSATVWCALLVNTSM-RRSVLAASTRGGQPAAFVSTVVS--SRRGLRNFVSGSAIGDGRRAVETLA----RGSCFPSSSSL-----------WVQHQPLRRRRTTRNGRRGSSPTVSSEEKSRVKVGGGARRGVSMGXXXXXXXXXXXXXSGSRAA-GEAMKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            M+P SATVW A LVN SM RRSVLA++T   QPAAF+ T+V+  SR G  +  S      GRRA         R   F SS S            W +H    R       R  ++P       +  +   G     + G             S   A    AMKVTLLSGFLGAGKTTLM NVLRQAREE+LS+AVIVNDMAD+N+DAQLL  G   ++  G LAA  A  +A   +  S       TSVAMQ GCICCTLKD+LLLEV
Sbjct:    6 MSPGSATVWYAFLVNASMMRRSVLASTTGRLQPAAFIGTIVTTTSRAGRGSLASDGPASGGRRATTREVFMGFRSPWFSSSRSTDSSGVQRLQPWWQRHHHRHRNEFATKSRFAATPXXXXXXXTGAERESGIPLPTAAGGGAVVKGDSGSGRSDKSATPAAAMKVTLLSGFLGAGKTTLMSNVLRQAREEKLSLAVIVNDMADINVDAQLLTLGNGLDQ--GDLAAAGASGSAVAGESSS-----GVTSVAMQDGCICCTLKDELLLEV 268

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: A0A6H5JJT0_9PHAE (CobW C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJT0_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 7.440e-42
Identity = 123/268 (45.90%), Postives = 143/268 (53.36%), Query Frame = 0

Query:    1 MTPCSATVWCALLVNTSM-RRSVLAASTRGGQPAAFVSTVVS--SRRGLRNFVSGSAIGDGRRAVETLA----RGSCFPSSSSL----------WVQHQPLRRRRTTRNGRRGSSPTVSSEEKSRVKVGGGARRGVSMGXXXXXXXXXXXXXSGSRAAGEAMKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            M+P SA VW ALLVN SM RRSVLA++TR  QPAAF+ T+ +  SR G  +  S      GRRA         R   F SS +           W Q    R        R  ++PT S+    R     G  R  + G               S      MKVTLLSGFLGAGKTTLM NVLRQAREEQLS+AVIVNDMAD+N+DAQ+L  G   ++ GG  AA A+ S         V      TSVAMQ GCICCTLKD+LLLEV
Sbjct:    6 MSPGSAAVWYALLVNASMMRRSVLASTTRRLQPAAFIGTIATTTSRTGRGSIASQGPARGGRRATTREVFMGFRSPWFSSSRATASSGVQRLQPWWQRHHHRLNEIATKSRFATTPTASAAGAERES---GIPRPTAAGDGVVVEGGNGGSSDKSATPAAVMKVTLLSGFLGAGKTTLMSNVLRQAREEQLSLAVIVNDMADINVDAQILTLGNGLDQ-GGIAAAGASGSXXXXXXSSGV------TSVAMQDGCICCTLKDELLLEV 263

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: Q0BRV9_GRABC (Low-affinity zinc transport protein n=7 Tax=Granulibacter bethesdensis TaxID=364410 RepID=Q0BRV9_GRABC)

HSP 1 Score: 88.2 bits (217), Expect = 1.850e-16
Identity = 51/107 (47.66%), Postives = 66/107 (61.68%), Query Frame = 0

Query:  145 MKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            + VT+LSGFLGAGKTTLM +VL     + L +AVIVNDM++VNIDA L+    + +  GG++A T                   +T V M  GCICCTL+DDLL+EV
Sbjct:   13 LPVTVLSGFLGAGKTTLMNHVLHN--RDGLRVAVIVNDMSEVNIDADLIRADTASDGTGGAVART------------------QETLVEMSNGCICCTLRDDLLIEV 99

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: A0A2S5MRL8_HYPSQ (4-hydroxytetrahydrobiopterin dehydratase n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A2S5MRL8_HYPSQ)

HSP 1 Score: 86.7 bits (213), Expect = 6.500e-16
Identity = 55/114 (48.25%), Postives = 67/114 (58.77%), Query Frame = 0

Query:  138 SRAAGEAMKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            S AA + + VT+LSGFLGAGKTTL+ +VL     E L +AVIVNDM++VNIDA+L+ RG      G  L  T                   +T V M  GCICCTL+DDLL EV
Sbjct:   13 SAAADKRLPVTVLSGFLGAGKTTLLNHVLNN--REGLRVAVIVNDMSEVNIDAELVERG------GADLKRT------------------EETLVEMSNGCICCTLRDDLLKEV 100

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: UPI001F41D1CF (GTP-binding protein n=2 Tax=Hydrogenophaga TaxID=47420 RepID=UPI001F41D1CF)

HSP 1 Score: 86.3 bits (212), Expect = 8.650e-16
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0

Query:  145 MKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            + VT+LSGFLGAGKTTL+ +VL  A  E L +AVIVNDM++VNIDA L+ RG   E  G +L+ T                   +  V M  GCICCTL++DLLLEV
Sbjct:   11 LPVTVLSGFLGAGKTTLLNHVL--ANREGLRVAVIVNDMSEVNIDASLVERGA--ENAGAALSRT------------------EEKMVEMSNGCICCTLREDLLLEV 95

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: UPI001D034A87 (GTP-binding protein n=1 Tax=Kinneretia sp. XES5 TaxID=2877940 RepID=UPI001D034A87)

HSP 1 Score: 85.9 bits (211), Expect = 1.120e-15
Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 0

Query:  145 MKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            + VT+LSGFLGAGKTTL+ +VL  A  + L +AVIVNDM++VNIDA L+ RG   E+ G +L+ T                   +  V M  GCICCTL++DLLLEV
Sbjct:    5 LPVTVLSGFLGAGKTTLLNHVL--ANRQGLRVAVIVNDMSEVNIDAALVARGS--EKAGAALSRT------------------EERLVEMSNGCICCTLREDLLLEV 89

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: A0A328CAT8_9DELT (CobW C-terminal domain-containing protein n=1 Tax=Lujinxingia litoralis TaxID=2211119 RepID=A0A328CAT8_9DELT)

HSP 1 Score: 85.9 bits (211), Expect = 1.140e-15
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 0

Query:  141 AGEAMKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            A + + VTLLSGFLGAGKTTL+ ++L     + L +AVIVNDM+++N+DAQL+ RG      G SL+ T                   +T V +  GCICCTL++DLLLEV
Sbjct:    7 ADKRLPVTLLSGFLGAGKTTLLNHILHN--RQGLRVAVIVNDMSEINVDAQLVERG------GASLSRT------------------EETLVELSNGCICCTLREDLLLEV 91

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: A0A843S878_9BURK (GTP-binding protein n=2 Tax=Rugamonas TaxID=212744 RepID=A0A843S878_9BURK)

HSP 1 Score: 85.9 bits (211), Expect = 1.190e-15
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0

Query:  145 MKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            + VT+LSGFLGAGKTTL+ +VL  A  E L +AVIVNDM++VNIDA LL +G   E  G +L+ T                   +  V M  GCICCTL++DLLLEV
Sbjct:    8 LPVTVLSGFLGAGKTTLLNHVL--ANREGLRVAVIVNDMSEVNIDASLLRKGA--ENAGAALSRT------------------EEKMVEMSNGCICCTLREDLLLEV 92

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: A8HR22_AZOC5 (Putative cobalamin synthesis protein n=3 Tax=Azorhizobium TaxID=6 RepID=A8HR22_AZOC5)

HSP 1 Score: 85.9 bits (211), Expect = 1.190e-15
Identity = 54/111 (48.65%), Postives = 66/111 (59.46%), Query Frame = 0

Query:  141 AGEAMKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            A   + VT+LSGFLGAGKTTL+ +VL  A  E L +AVIVNDM++VNIDA+L+  G      GG L+ T                   +T V M  GCICCTL+DDLL EV
Sbjct:   12 ADNRLPVTVLSGFLGAGKTTLLNHVL--ANREGLRVAVIVNDMSEVNIDAELIRAG------GGDLSRT------------------QETLVEMTNGCICCTLRDDLLAEV 96

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BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Match: UPI00140CF2E0 (GTP-binding protein n=1 Tax=Duganella aceris TaxID=2703883 RepID=UPI00140CF2E0)

HSP 1 Score: 85.5 bits (210), Expect = 1.380e-15
Identity = 53/107 (49.53%), Postives = 66/107 (61.68%), Query Frame = 0

Query:  145 MKVTLLSGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEEEPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLEV 251
            + VT+LSGFLGAGKTTL+ +VL  A  E L +AVIVNDM++VNIDA LL +G   E  G +L+ T                   +  V M  GCICCTL++DLLLEV
Sbjct:   12 LPVTVLSGFLGAGKTTLLNHVL--ANREGLRVAVIVNDMSEVNIDASLLRQGA--ENAGAALSRT------------------EEKMVEMSNGCICCTLREDLLLEV 96

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig13880.2921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7B4_ECTSI	1.730e-42	45.19	Cobalamin synthesis protein, P47K n=1 Tax=Ectocarp...	[more]
A0A6H5JJT0_9PHAE	7.440e-42	45.90	CobW C-terminal domain-containing protein n=1 Tax=...	[more]
Q0BRV9_GRABC	1.850e-16	47.66	Low-affinity zinc transport protein n=7 Tax=Granul...	[more]
A0A2S5MRL8_HYPSQ	6.500e-16	48.25	4-hydroxytetrahydrobiopterin dehydratase n=2 Tax=u...	[more]
UPI001F41D1CF	8.650e-16	49.53	GTP-binding protein n=2 Tax=Hydrogenophaga TaxID=4...	[more]
UPI001D034A87	1.120e-15	48.60	GTP-binding protein n=1 Tax=Kinneretia sp. XES5 Ta...	[more]
A0A328CAT8_9DELT	1.140e-15	45.95	CobW C-terminal domain-containing protein n=1 Tax=...	[more]
A0A843S878_9BURK	1.190e-15	49.53	GTP-binding protein n=2 Tax=Rugamonas TaxID=212744...	[more]
A8HR22_AZOC5	1.190e-15	48.65	Putative cobalamin synthesis protein n=3 Tax=Azorh...	[more]
UPI00140CF2E0	1.380e-15	49.53	GTP-binding protein n=1 Tax=Duganella aceris TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003495	CobW/HypB/UreG, nucleotide-binding domain	PFAM	PF02492	cobW	coord: 147..250 e-value: 1.1E-20 score: 74.0
None	No IPR available	PANTHER	PTHR43603:SF1	COBW DOMAIN-CONTAINING PROTEIN DDB_G0274527	coord: 115..251
None	No IPR available	PANTHER	PTHR43603	FAMILY NOT NAMED	coord: 115..251
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..251
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..24
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.552
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 146..248

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig13880	contig	L-elsbetiae_contig13880:160..1461 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig13880.2921.1	mRNA_L-elsbetiae_contig13880.2921.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig13880 160..1470 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig13880.2921.1 ID=prot_L-elsbetiae_contig13880.2921.1|Name=mRNA_L-elsbetiae_contig13880.2921.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=251bp
MTPCSATVWCALLVNTSMRRSVLAASTRGGQPAAFVSTVVSSRRGLRNFV
SGSAIGDGRRAVETLARGSCFPSSSSLWVQHQPLRRRRTTRNGRRGSSPT
VSSEEKSRVKVGGGARRGVSMGAAAGSSVGGSEGKSGSRAAGEAMKVTLL
SGFLGAGKTTLMRNVLRQAREEQLSIAVIVNDMADVNIDAQLLVRGESEE
EPGGSLAATAAPSAAPVADVRSVRTVNSDTSVAMQGGCICCTLKDDLLLE
V

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003495	CobW/HypB/UreG_dom
IPR027417	P-loop_NTPase