prot_L-elsbetiae_contig10239.287.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10239.287.1
Unique Nameprot_L-elsbetiae_contig10239.287.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length183
Homology
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: D7FY88_ECTSI (SSD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY88_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 1.910e-45
Identity = 90/182 (49.45%), Postives = 118/182 (64.84%), Query Frame = 0
Query:    1 FANFTVESGGDQLWVPRESISRTQEETITAFFGEDTEWALVLLEHPDEGGNVLTKASVDVLWELDAKIKELETGDGEDFSDLCAKGLDGVTCAQPFAGVTTFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGDGEITAARAMMQSYALRKTTGSDAE-EKAVLEW 181
            FANF VE+ G+ LWVP +S++  Q + I   F    E+A  L+E P E G+VLTK SVD +WELDA +  ++  DG  ++D+C K LDGVTC QPF G+T FWG DF TY A+V +D+DVL AVN   FP G  V   A+FGN I YD DG I+ A A++Q+YAL   +  DA   + V +W
Sbjct:   70 FANFRVEADGEDLWVPADSLTNDQRDIILGDFDGGGEFASFLVESPSETGSVLTKESVDAVWELDAIVMAVKV-DGNTYADVCLKELDGVTCEQPFRGITRFWG-DFATYEASVSNDADVLAAVNATTFPDGSAVNQQALFGNGITYDDDGNISGATAIIQAYALDSDSDEDAGINEIVYDW 249          
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: D7FY89_ECTSI (Novel protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY89_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 2.350e-45
Identity = 90/175 (51.43%), Postives = 117/175 (66.86%), Query Frame = 0
Query:    1 FANFTVESGGDQLWVPRESISRTQEETITAFFGEDTEWALVLLEHPDEGGNVLTKASVDVLWELDAKIKELETGDGEDFSDLCAKGLDGVTCAQPFAGVTTFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGDGEITAARAMMQSYALRKTTGSDAEE 175
            FANF +E+ G+ LWVP +S+++ Q++ I   F +D E+A  L+E P   G+VLTK SVD +WELDA +  +E G G  + D+C K LDGVTC  PF G+T FWG DF+TY A+V  D+D+L AVNV  FP G  V   A+FGN I YD DG I+ A A MQ+YAL    GSD +E
Sbjct:   71 FANFRIEADGEDLWVPADSLAKDQQDIIIQDFDDDGEYAAFLVESPS--GSVLTKESVDAIWELDAIVMAVEAG-GNTYVDVCPKELDGVTCEPPFRGITRFWG-DFDTYEASVTSDADILAAVNVATFPDGSTVNQLALFGNGITYDADGNISGASATMQAYAL----GSDPDE 237          
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: D7FY95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY95_ECTSI)

HSP 1 Score: 167 bits (423), Expect = 1.160e-44
Identity = 89/183 (48.63%), Postives = 117/183 (63.93%), Query Frame = 0
Query:    1 FANFTVESGGDQLWVPRESISRTQEETITAFFGEDTEWALVLLEHPDEGGNVLTKASVDVLWELDAKIKELETGDGEDFSDLCAKGLDGVTCAQPFAGVTTFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGDGEITAARAMMQSYALRKTT--GSDAEEKAVLEW 181
            FANFT+E+ G+ LWVP +S++R  +  +   F  D E+A  L+E P E G+VLTK SVD +WELDA ++ +E G G  ++D+C K LDGVTC   F G+T FWG DF TY A+V  D+D+L  VNV  FP G  V   A+FGN I YD DG I+ ARA +Q +AL      G+D  E  V +W
Sbjct:   68 FANFTIEADGEDLWVPADSLARDHQSIVLEDFDGDGEFASFLVESPSETGSVLTKESVDAIWELDAIVRAVEVG-GNTYADVCGKELDGVTCEPVFRGITRFWG-DFATYEASVTSDADILATVNVATFPDGSTVNQQALFGNGITYDDDGNISGARATIQGFALDSDPDDGADINED-VFDW 247          
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: D8LCK9_ECTSI (Similar to Patched domain-containing protein 3, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK9_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 1.130e-37
Identity = 72/149 (48.32%), Postives = 99/149 (66.44%), Query Frame = 0
Query:   34 EDTEWALVLLEHPDEGGNVLTKASVDVLWELDAKIKELETGDGEDFSDLCAKGLDGVTCAQPFAGVTTFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGDGE-ITAARAMMQSYALRKTTGSDAEEKAVLEW 181
            + +++AL+LLE   EGGNVLTKASVD+LW+L++++  +ET  G  ++DLC    DGVTC QPF G+T FWG+DF+ Y A    D+DVL A+N+D +P G  V+  A+FGNS+ YD  G  + +A   MQSY L  T   D E   V +W
Sbjct:   83 DGSDYALLLLESAVEGGNVLTKASVDMLWDLNSRVMLVETESGNTYTDLCTTDADGVTCKQPFRGITRFWGNDFDIYEAAATSDADVLAAINMDTYPDGQAVSLEAVFGNSLTYDATGSSVVSAGVFMQSYELELTANDDEEFWEVRQW 231          
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: D7FY98_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY98_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 4.660e-36
Identity = 76/150 (50.67%), Postives = 97/150 (64.67%), Query Frame = 0
Query:   33 GEDTEWALVLLEHPDEGGNVLTKASVDVLWELDAKIKELETGDGEDFSDLCAKGLDGVTCAQPFAGVTTFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGDGEITAARAMMQSYALRKTTGSDAE-EKAVLEW 181
            G+D E+A  L+E P E G+VLTK SVD +WELDA +  +E  DG  ++DLC+K LDG TC   F G+T FWG DF TY A+V  D+D+L AVNV  FP G  V+  A+FGN I YD DG I+ ARA++Q YAL       A+    V +W
Sbjct:   78 GDDGEYATFLVESPSETGSVLTKESVDAVWELDAIVMAVEV-DGNTYADLCSKELDGATCEPVFRGITRFWG-DFYTYEASVTSDADILAAVNVTTFPDGSAVSEQALFGNGITYDDDGNISGARAVIQGYALASDPDDGADINDYVFDW 225          
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: D8LCK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK4_ECTSI)

HSP 1 Score: 108 bits (270), Expect = 4.200e-24
Identity = 58/110 (52.73%), Postives = 71/110 (64.55%), Query Frame = 0
Query:   73 TGDGEDFSDLCAKGLDGVTCAQPFAGVTTFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGDGEITAARAMMQSYALRKTTGSDAE-EKAVLEW 181
            T  G  ++D+CAK LDGVTCA PF GVT FW D F  Y A+V  D+DVLEAVNV+ FP G  V    +FGN IVYD DG I+  +A++Q YAL      DA+  K V +W
Sbjct:   19 TWGGHTYADVCAKELDGVTCAAPFRGVTRFW-DGFAAYEASVTSDADVLEAVNVEAFPDGFPVNQQTLFGNGIVYDDDGNISGVKAIIQGYALSSDPDDDADINKEVFDW 127          
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Match: A0A6H5L5K0_9PHAE (SSD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 9.610e-13
Identity = 38/84 (45.24%), Postives = 54/84 (64.29%), Query Frame = 0
Query:    1 FANFTVESGGDQLWVPRESISRTQEETITAFFGEDTEWALVLLEHPDEGGNVLTKASVDVLWELDAKIKELETGDGEDFSDLCA 84
            FANF +E+ G+ LWVP +S+++ Q++ I   F +D E+A +L+E P   GNVLTK SVD +WELDA +  +E     D   L A
Sbjct:   72 FANFRIEADGEDLWVPADSLAKDQQDIIVQDFDDDGEYAALLVESPS--GNVLTKESVDAIWELDAIVMAVEASVTSDADILAA 153          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10239.287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FY88_ECTSI1.910e-4549.45SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FY89_ECTSI2.350e-4551.43Novel protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
D7FY95_ECTSI1.160e-4448.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCK9_ECTSI1.130e-3748.32Similar to Patched domain-containing protein 3, pa... [more]
D7FY98_ECTSI4.660e-3650.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCK4_ECTSI4.200e-2452.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L5K0_9PHAE9.610e-1345.24SSD domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 1..173
NoneNo IPR availablePANTHERPTHR10796:SF130coord: 1..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10239contigL-elsbetiae_contig10239:2233..5738 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10239.287.1mRNA_L-elsbetiae_contig10239.287.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10239 2233..5739 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10239.287.1 ID=prot_L-elsbetiae_contig10239.287.1|Name=mRNA_L-elsbetiae_contig10239.287.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=183bp
FANFTVESGGDQLWVPRESISRTQEETITAFFGEDTEWALVLLEHPDEGG
NVLTKASVDVLWELDAKIKELETGDGEDFSDLCAKGLDGVTCAQPFAGVT
TFWGDDFETYTATVLDDSDVLEAVNVDNFPGGGGVAPAAIFGNSIVYDGD
GEITAARAMMQSYALRKTTGSDAEEKAVLEWLA
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