mRNA_L-elsbetiae_contig13799.2872.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: D7FYP3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYP3_ECTSI) HSP 1 Score: 275 bits (704), Expect = 1.700e-80 Identity = 160/278 (57.55%), Postives = 178/278 (64.03%), Query Frame = 1 Query: 1 RLIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAA-------------VAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVLS 795 RLIVANTHLYFHPNAAHIRLMQLV LVERISR+RKDL+ARGLRP VILGGDLNSPP GPVRYLMG++IGPD+DLW N+GTFKWGDRFFDE+ T A+P + S + + FLP VPYLR P L+L SGTP FTNFTP+FT+TLDYVFIEG AD+G TP + A +AVL VE A VAPMPEE PLRA TPGLPSETFPSDH+SLVVDL LS Sbjct: 450 RLIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLARGLRPAVILGGDLNSPPDGPVRYLMGDLIGPDSDLWENMGTFKWGDRFFDELPTTSGXXXXXXXXXXXXXXSRIPDEKAST-ASPRPNNATNNNDNETARASHPSVAGSKAKPSPFLPNVPYLRTPFDLQLASGTPAFTNFTPDFTDTLDYVFIEGAGADSG-TPTT-------AAEAVLAVEGAXXXXXXXXXXXXXXXXXXVAPMPEEGPLRATTPGLPSETFPSDHVSLVVDLALS 718
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A6H5JRV9_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV9_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.300e-59 Identity = 122/211 (57.82%), Postives = 137/211 (64.93%), Query Frame = 1 Query: 1 RLIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAAR----------PSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAG 603 R+IVANTHLYFHPNAAHIRLMQLV LVERISR+RKDL+ARGLRP V+LGGDLNS P GPVRYLMG++IGPD+DLW NVGTFKWGDRFFDE+ T P++R DG A+P + S + + FL VP LR PL L+L SGTP FTNFTPEFTETLDYVFIEG AD G Sbjct: 620 RVIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLARGLRPAVVLGGDLNSTPGGPVRYLMGDLIGPDSDLWENVGTFKWGDRFFDELPTTSGAXXXXXXXXXXXXSPTSRIPDGKAST---------ASPRPNNATNNNDNETTRASHHSVAGSKAKPSPFLRNVPCLRTPLDLQLASGTPAFTNFTPEFTETLDYVFIEGAGADNG 821
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A836CIF3_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIF3_9STRA) HSP 1 Score: 139 bits (349), Expect = 4.350e-31 Identity = 106/262 (40.46%), Postives = 148/262 (56.49%), Query Frame = 1 Query: 1 RLIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDL 786 R+IVANTHL+FHPNAAHIRL+Q+VAL+ + IR+ L++ G V++ GD+NS P +RYL G+ + ++ +W +V F+WG+R+F +VAA + XXXXXXXX XXXXXXXXXXXXX + + +P + +PL L SG PP+TNFTP FT+TLDY+F + +A + AP+P EA LRA+T GLP +PSDH+++V D+ Sbjct: 533 RIIVANTHLFFHPNAAHIRLIQMVALMNAVQGIRERLLSEGQEVGVVVCGDMNSTPLTAIRYLEGDTLSAEHAVWRHVRAFRWGERYFKSAKA--KVAAEDGSGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGPVSAIPTVALPLPLTNASGYPPYTNFTPAFTDTLDYIFADTDSFEA---------------------------VSSAPVPPEAELRAITVGLPYRGYPSDHVAVVADI 765
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: W7T5B9_9STRA (Endonuclease/exonuclease/phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5B9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.350e-19 Identity = 84/275 (30.55%), Postives = 117/275 (42.55%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVAR-GLRPVVILGGDLNSPPF-GPVRYLMGEVIGPDNDLWGNVGTFKWGDR--------FFDEIATAPEVAARPSARGA----DGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDL 786 L+V NTHL++HP A HIRLMQ+ LV ++ + ++ + G+RP ++L GDLNS P +RYL GE IGP++++W ++ F WG R ATA + A +G DG G S S + +P L + G P FTN+ F ETLDY+F+E A + P VL V A P EEA LPS PSDH+S++ D+ Sbjct: 19 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLES-EAPVPLDPSGASFS-------VLSVGAM-------PTREEA---GQDTALPSWQTPSDHVSILCDV 275
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: W7TNA6_9STRA (Endonuclease/exonuclease/phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNA6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.270e-18 Identity = 84/275 (30.55%), Postives = 117/275 (42.55%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVAR-GLRPVVILGGDLNSPPF-GPVRYLMGEVIGPDNDLWGNVGTFKWGDR--------FFDEIATAPEVAARPSARGA----DGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPYLRVPLGLELVSGTPPFTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDL 786 L+V NTHL++HP A HIRLMQ+ LV ++ + ++ + G+RP ++L GDLNS P +RYL GE IGP++++W ++ F WG R ATA + A +G DG G S S + +P L + G P FTN+ F ETLDY+F+E A + P VL V A P EEA LPS PSDH+S++ D+ Sbjct: 60 LLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKXXXXXAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLES-EAPVPLDPSGASFS-------VLSVGAM-------PTREEA---GQDTALPSWQTPSDHVSILCDV 316
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812UPP5_9DINO (PDE12 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812UPP5_9DINO) HSP 1 Score: 75.1 bits (183), Expect = 2.110e-10 Identity = 74/271 (27.31%), Postives = 111/271 (40.96%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIR---KDLVARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792 L+++NTHL++HPNA HIRL+Q++ L+ + +R KD A G P VI GDLN P G V+ L+ + D++ W F W D A E R S P+ S V P + + G LR PLG +++ + +P FTN+ +F+ LDY+ + D +L + +AP ++ + GLPSE PSDH+S+ DL Sbjct: 996 LVLSNTHLFYHPNARHIRLLQIMCLLHEVQALREQHKD--AEGRLPHVIFAGDLNCLPETGAVQLLLNGEVASDHEDWETSSQFAWRDEEVSADAGEAEEVPRTS--------------------VPSMEADE-------------SDVVEPLGREAWQKGSGIALRNPLGALVDVYANSPQKFTNYVHDFSGILDYILTD---------------------DHLLSTKCL-----LAPAEKDVEVHG---GLPSELHPSDHLSIAADLTF 1202
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812Y3X2_SYMPI (Pde12 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812Y3X2_SYMPI) HSP 1 Score: 73.6 bits (179), Expect = 5.780e-10 Identity = 78/269 (29.00%), Postives = 108/269 (40.15%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKD-LVARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792 L++ANTHL++HPNA HIRL+Q++ L+ ++ +R+ A+G P VI GDLN P G V+ L+ + D++ W F W D EV+A A AD P A V P K H+ G L PLG +++ + TP FTN+ EF LDY+ D L+ A A + E GLPS PSDH+S+ DL Sbjct: 708 LVLANTHLFYHPNARHIRLLQIMCLLHQVQELREQHRDAKGQLPNVIFAGDLNCLPETGAVQLLLKGEVTSDHEDWETSSQFAWRDE---------EVSA--DAGEADECAPKSSVPSMEADEADV---------------------VEPLPKEHWQNGRGIALHNPLGALVDVYAKTPQKFTNYVHEFRGILDYILT----------------------DDQLQSTKCLLAPAEKDVEEHG-------GLPSVLHPSDHLSIAADLTF 915
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812NHM5_SYMMI (Pde12 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812NHM5_SYMMI) HSP 1 Score: 73.2 bits (178), Expect = 7.330e-10 Identity = 71/269 (26.39%), Postives = 110/269 (40.89%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLV-ARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792 L++ANTHL++HPNA HIRL+Q++ L+ + +RK A G P +I GDLN P G V+ L+ + D++ W F W D + A A E P + + P+ V P + + G L+ PLG +++ + TP FTN+ +F+ LDY+ +G + A +AP ++ + GLPS PSDH+S+ DL Sbjct: 273 LVLANTHLFYHPNARHIRLLQIMCLLHEVQDLRKQHKDAEGQLPHIIFAGDLNCLPETGAVQLLLTGQVPSDHEDWETSSQFAWRDE--EASADAGEAEEIPKS------------------SVPSMEADDTDV-------------VEPLPREAWQKGSGIALQNPLGALVDVYANTPQKFTNYVHDFSGILDYILTDG--------------------------QLQATKCLLAPAEKDVEVHG---GLPSVLHPSDHLSIAADLTF 479
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: A0A812M0P0_9DINO (MPK1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812M0P0_9DINO) HSP 1 Score: 73.2 bits (178), Expect = 8.330e-10 Identity = 71/269 (26.39%), Postives = 110/269 (40.89%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLV-ARGLRPVVILGGDLNS-PPFGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADGATPPXXXXXXXXGAAPTKSGXXXXXXXXXXXXXPGSASVTPNAKRHFLPGVPY-LRVPLG--LELVSGTPP-FTNFTPEFTETLDYVFIEGGRADAGVTPGSGGMPAGAAGDAVLRVEAAAAAAAVAPMPEEAPLRAMTPGLPSETFPSDHISLVVDLVL 792 L++ANTHL++HPNA HIRL+Q++ L+ + +RK A G P +I GDLN P G V+ L+ + D++ W F W D + A A E P + + P+ V P + + G L+ PLG +++ + TP FTN+ +F+ LDY+ +G + A +AP ++ + GLPS PSDH+S+ DL Sbjct: 587 LVLANTHLFYHPNARHIRLLQIMCLLHEVQDLRKQHKDAEGQLPHIIFAGDLNCLPETGAVQLLLTGQVPSDHEDWETSSQFAWRDE--EASADAGEAEEIPKS------------------SVPSMEADDTDV-------------VEPLPREAWQKGSGIALQNPLGALVDVYANTPQKFTNYVHDFSGILDYILTDG--------------------------QLQATKCLLAPAEKDVEVHG---GLPSVLHPSDHLSIAADLTF 793
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Match: L1JXM2_GUITC (Endo/exonuclease/phosphatase domain-containing protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JXM2_GUITC) HSP 1 Score: 70.5 bits (171), Expect = 1.120e-9 Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 4 LIVANTHLYFHPNAAHIRLMQLVALVERISRIRKDLVARGLRPVVILG-GDLNSPP-FGPVRYLMGEVIGPDNDLWGNVGTFKWGDRFFDEIATAPEVAARPSARGADG 324 LI+ NTHL+FHP A+HIR++Q+ A++ +++ + R R +L GDLNS P G + L G + P + W F+WGD +E+ + PS R +G Sbjct: 117 LIIVNTHLFFHPEASHIRMLQVSAILTEAMDMKERMEERSQRACAVLFVGDLNSEPDTGAIELLAGGAVSPQHPEWEAHAGFRWGDNGEEEVGV--HADSGPSVRREEG 223 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13799.2872.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13799.2872.1 >prot_L-elsbetiae_contig13799.2872.1 ID=prot_L-elsbetiae_contig13799.2872.1|Name=mRNA_L-elsbetiae_contig13799.2872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=247bp MQLVALVERISRIRKDLVARGLRPVVILGGDLNSPPFGPVRYLMGEVIGPback to top mRNA from alignment at L-elsbetiae_contig13799:2..2896- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13799.2872.1 ID=mRNA_L-elsbetiae_contig13799.2872.1|Name=mRNA_L-elsbetiae_contig13799.2872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2895bp|location=Sequence derived from alignment at L-elsbetiae_contig13799:2..2896- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13799:2..2896- >mRNA_L-elsbetiae_contig13799.2872.1 ID=mRNA_L-elsbetiae_contig13799.2872.1|Name=mRNA_L-elsbetiae_contig13799.2872.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1482bp|location=Sequence derived from alignment at L-elsbetiae_contig13799:2..2896- (Laminarionema elsbetiae ELsaHSoW15)back to top |