mRNA_L-elsbetiae_contig1378.2863.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig1378.2863.1
Unique Name	mRNA_L-elsbetiae_contig1378.2863.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A6H5KK11_9PHAE (Casein kinase I n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK11_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 1.270e-66
Identity = 134/252 (53.17%), Postives = 154/252 (61.11%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAPQWDWSKFDAQPGSITGDAVADNACAENSTPIKAGETPQVPGLWQALPVEAKATIKANI-PILGSKEDEGEVTKSGIGSEREGLGASPISN------------------CQLELGNAERDNNGAELAGRISTSSATNSGGGVASGSSAPRACRGQTAGHSTTGWSMWNLRPKTSGTFWGRG----TPSSPGPG 687
            MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHS S  P+WDWSKF+ + G    + ++  A A +  P   GET  VPG+WQA+P E K   K N+ P++ SK  E  V   G+G E +  GA P +                   CQLE  N E DN   E          +NS G  A G +A R  RG +  H T GWSMWN+RPKTSG+FWGRG    TPS  G G
Sbjct:  243 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSPSDTPEWDWSKFEGRSGRGGVENISGEAIAISDNP---GET-HVPGVWQAVPAEVKVITKENLTPVVRSKNGENHVDNPGVGREHDRPGAQPAAKRSTTEDDKKRNSDSTSDRCQLEPQNGENDNQATEFT--------SNSRGRCAGGRNATRRSRGHSPVHGTAGWSMWNMRPKTSGSFWGRGVQETTPSEAGNG 482

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A836C7T0_9STRA (Casein kinase I (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7T0_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.310e-24
Identity = 52/71 (73.24%), Postives = 59/71 (83.10%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSS--SGAPQWDWSKFDA 207
            +ERKQAISIQQLC  LPQQFAEYLAYCRSLKFEAKPN+ YL+GL RELYK QG     +G  +WDW+KF+A
Sbjct:  241 LERKQAISIQQLCHALPQQFAEYLAYCRSLKFEAKPNISYLRGLFRELYKGQGFGPGPNGLLEWDWTKFEA 311

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A6S9DNA6_HETAK (Casein kinase I (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9DNA6_HETAK)

HSP 1 Score: 108 bits (270), Expect = 1.480e-24
Identity = 48/68 (70.59%), Postives = 58/68 (85.29%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAPQWDWSKFD 204
            ME+KQ++ I QLCQGLPQQFAEYLAYCRSLKF+AKPN+ YL+GL RELY+ QG+S+    +WDWSK D
Sbjct:  232 MEKKQSVPIAQLCQGLPQQFAEYLAYCRSLKFDAKPNISYLRGLFRELYRSQGYSAELGLEWDWSKID 299

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A835Z3H2_9STRA (Casein kinase I (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3H2_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.050e-24
Identity = 51/75 (68.00%), Postives = 62/75 (82.67%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGH--SSSGAPQWDWSKFDAQPGS 219
            +ERKQA+SIQQLC  LPQQFAEYLAYCRSLKFEAKPN+ YL+GL RELYK  G+  S++G  +WDW+K++   GS
Sbjct:  239 LERKQAVSIQQLCHNLPQQFAEYLAYCRSLKFEAKPNISYLRGLFRELYKGAGYGPSAAGVLEWDWTKYEHGNGS 313

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A7S2V1K4_9STRA (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1K4_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.660e-23
Identity = 45/68 (66.18%), Postives = 57/68 (83.82%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAPQWDWSKFD 204
            +E+KQ++ I QLCQGLPQQFAEYLAY RSLKF+AKPN+ YL+GL RELY+ QG+SS    +WDWS+ +
Sbjct:   40 LEKKQSVPIAQLCQGLPQQFAEYLAYTRSLKFDAKPNISYLRGLFRELYRAQGYSSEQGMEWDWSRIE 107

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: B8C149_THAPS (Casein kinase I n=8 Tax=Ochrophyta TaxID=2696291 RepID=B8C149_THAPS)

HSP 1 Score: 98.6 bits (244), Expect = 9.150e-21
Identity = 45/81 (55.56%), Postives = 62/81 (76.54%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAP-QWDWSKFDAQPGSITGDAVA 240
            ME+KQ+I+I  LCQG P QFAEYLAYCRSLKFEAKPN+ YL+G+ R+L++ QG++++ +   WDW++ D   G+   D VA
Sbjct:  228 MEKKQSITIPALCQGCPSQFAEYLAYCRSLKFEAKPNIAYLRGMFRDLFRSQGYTNNNSSLDWDWNRIDTGTGADGRDRVA 308

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A7S3Q747_9STRA (Casein kinase I n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3Q747_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.210e-20
Identity = 46/81 (56.79%), Postives = 64/81 (79.01%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAP-QWDWSKFDAQPGSITGDAVA 240
            ME+KQ+I+I  LCQG P QFAEYLAYCRSLKFEAKPN+ YL+G+ R+L++ QG+S++ +   WDW++ D+  GS  G+ V+
Sbjct:  295 MEKKQSITIPALCQGCPSQFAEYLAYCRSLKFEAKPNIAYLRGMFRDLFRTQGYSNNNSSLDWDWNRIDS--GSAGGERVS 373

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: K0RKJ8_THAOC (Casein kinase I n=11 Tax=Bacillariophyta TaxID=2836 RepID=K0RKJ8_THAOC)

HSP 1 Score: 97.8 bits (242), Expect = 1.690e-20
Identity = 44/79 (55.70%), Postives = 62/79 (78.48%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAP-QWDWSKFDAQPGSITGDA 234
            ME+KQ+I+I  LCQG P QFAEYLAYCRSLKFEAKPN+ YL+G+ R+L++ QG++++ +   WDW++ D   GS  G++
Sbjct:  227 MEKKQSITIPALCQGCPSQFAEYLAYCRSLKFEAKPNIAYLRGMFRDLFRSQGYTNNNSSLDWDWNRVDGGSGSGGGES 305

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A7S2LBU3_9STRA (Casein kinase I n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LBU3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 3.680e-20
Identity = 42/70 (60.00%), Postives = 58/70 (82.86%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAP-QWDWSKFDA 207
            ME+KQ+I+I  LCQG P QFAEYLAYCRSLKFEAKPN+ YL+G+ R+L++ QG++++ +   WDW++ DA
Sbjct:  230 MEKKQSITIPALCQGCPSQFAEYLAYCRSLKFEAKPNIAYLRGMFRDLFRSQGYTNTNSSLDWDWNRIDA 299

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BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Match: A0A7S2HDC3_9STRA (Casein kinase I n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HDC3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 6.400e-20
Identity = 42/73 (57.53%), Postives = 59/73 (80.82%), Query Frame = 1

Query:    1 MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYKVQGHSSSGAP-QWDWSKFDAQPG 216
            ME+KQ+I+I  LCQG P QFAEYLAYCRSLKFEAKPN+ YL+G+ R+L++ QG++++ +   WDW++ D+  G
Sbjct:  228 MEKKQSITIPALCQGCPSQFAEYLAYCRSLKFEAKPNIAYLRGMFRDLFRSQGYTNNNSSLDWDWNRIDSGSG 300

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1378.2863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KK11_9PHAE	1.270e-66	53.17	Casein kinase I n=1 Tax=Ectocarpus sp. CCAP 1310/3...	[more]
A0A836C7T0_9STRA	1.310e-24	73.24	Casein kinase I (Fragment) n=1 Tax=Tribonema minus...	[more]
A0A6S9DNA6_HETAK	1.480e-24	70.59	Casein kinase I (Fragment) n=2 Tax=Heterosigma aka...	[more]
A0A835Z3H2_9STRA	5.050e-24	68.00	Casein kinase I (Fragment) n=1 Tax=Tribonema minus...	[more]
A0A7S2V1K4_9STRA	1.660e-23	66.18	Non-specific serine/threonine protein kinase (Frag...	[more]
B8C149_THAPS	9.150e-21	55.56	Casein kinase I n=8 Tax=Ochrophyta TaxID=2696291 R...	[more]
A0A7S3Q747_9STRA	1.210e-20	56.79	Casein kinase I n=6 Tax=Bacillariophyta TaxID=2836...	[more]
K0RKJ8_THAOC	1.690e-20	55.70	Casein kinase I n=11 Tax=Bacillariophyta TaxID=283...	[more]
A0A7S2LBU3_9STRA	3.680e-20	60.00	Casein kinase I n=1 Tax=Leptocylindrus danicus Tax...	[more]
A0A7S2HDC3_9STRA	6.400e-20	57.53	Casein kinase I n=1 Tax=Helicotheca tamesis TaxID=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1378	contig	L-elsbetiae_contig1378:2089..5691 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	99.0
Seed ortholog evalue	3.1e-18
Seed eggNOG ortholog	35128.Thaps22118
Preferred name	CSNK1D
KEGG ko	ko:K02218,ko:K08959,ko:K08960,ko:K14758
KEGG Pathway	ko03008,ko04011,ko04068,ko04310,ko04340,ko04341,ko04390,ko04391,ko04392,ko04540,ko04710,ko04711,map03008,map04011,map04068,map04310,map04340,map04341,map04390,map04391,map04392,map04540,map04710,map04711
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000018,GO:0000045,GO:0000086,GO:0000139,GO:0000166,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000407,GO:0000775,GO:0000776,GO:0000777,GO:0000779,GO:0000793,GO:0001558,GO:0001654,GO:0001736,GO:0001737,GO:0001738,GO:0001745,GO:0001932,GO:0001933,GO:0001934,GO:0002009,GO:0002097,GO:0002098,GO:0002165,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004713,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005793,GO:0005794,GO:0005813,GO:0005815,GO:0005816,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005886,GO:0005933,GO:0005934,GO:0005935,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006888,GO:0006897,GO:0006900,GO:0006901,GO:0006903,GO:0006906,GO:0006914,GO:0006950,GO:0006974,GO:0006996,GO:0007010,GO:0007017,GO:0007020,GO:0007030,GO:0007033,GO:0007049,GO:0007051,GO:0007059,GO:0007127,GO:0007129,GO:0007154,GO:0007163,GO:0007164,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007346,GO:0007399,GO:0007423,GO:0007444,GO:0007446,GO:0007472,GO:0007476,GO:0007552,GO:0007555,GO:0007560,GO:0007562,GO:0007610,GO:0007622,GO:0007623,GO:0007626,GO:0008033,GO:0008062,GO:0008064,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008360,GO:0008544,GO:0008608,GO:0009056,GO:0009314,GO:0009410,GO:0009416,GO:0009451,GO:0009628,GO:0009653,GO:0009719,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009913,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010389,GO:0010467,GO:0010468,GO:0010520,GO:0010562,GO:0010563,GO:0010564,GO:0010604,GO:0010605,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010817,GO:0010845,GO:0010941,GO:0012505,GO:0014070,GO:0015630,GO:0016020,GO:0016043,GO:0016050,GO:0016055,GO:0016070,GO:0016192,GO:0016236,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0018105,GO:0018108,GO:0018193,GO:0018209,GO:0018212,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0022008,GO:0022402,GO:0022406,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022613,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0030100,GO:0030111,GO:0030154,GO:0030162,GO:0030177,GO:0030178,GO:0030182,GO:0030242,GO:0030307,GO:0030424,GO:0030426,GO:0030427,GO:0030431,GO:0030534,GO:0030554,GO:0030832,GO:0030833,GO:0030838,GO:0030855,GO:0030999,GO:0031090,GO:0031109,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031331,GO:0031334,GO:0031399,GO:0031400,GO:0031401,GO:0031974,GO:0031981,GO:0031984,GO:0032091,GO:0032268,GO:0032269,GO:0032270,GO:0032271,GO:0032273,GO:0032368,GO:0032386,GO:0032434,GO:0032436,GO:0032501,GO:0032502,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032922,GO:0032956,GO:0032970,GO:0032991,GO:0033036,GO:0033043,GO:0033116,GO:0033157,GO:0033218,GO:0033267,GO:0033365,GO:0033551,GO:0033554,GO:0034067,GO:0034248,GO:0034250,GO:0034470,GO:0034613,GO:0034622,GO:0034641,GO:0034660,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035265,GO:0035295,GO:0035315,GO:0035316,GO:0035317,GO:0035639,GO:0036094,GO:0036211,GO:0036477,GO:0038083,GO:0040007,GO:0040008,GO:0040020,GO:0042067,GO:0042176,GO:0042220,GO:0042221,GO:0042254,GO:0042273,GO:0042274,GO:0042277,GO:0042306,GO:0042325,GO:0042326,GO:0042327,GO:0042493,GO:0042752,GO:0042981,GO:0042995,GO:0043005,GO:0043025,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043279,GO:0043393,GO:0043412,GO:0043933,GO:0044057,GO:0044060,GO:0044085,GO:0044087,GO:0044089,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044380,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044431,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045132,GO:0045143,GO:0045475,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045732,GO:0045787,GO:0045807,GO:0045836,GO:0045862,GO:0045911,GO:0045927,GO:0045935,GO:0045936,GO:0045937,GO:0046483,GO:0046777,GO:0046785,GO:0046822,GO:0046883,GO:0046907,GO:0048148,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048259,GO:0048260,GO:0048280,GO:0048284,GO:0048285,GO:0048471,GO:0048511,GO:0048512,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051050,GO:0051052,GO:0051054,GO:0051094,GO:0051098,GO:0051100,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051223,GO:0051225,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051248,GO:0051258,GO:0051276,GO:0051302,GO:0051316,GO:0051321,GO:0051445,GO:0051446,GO:0051455,GO:0051493,GO:0051495,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051960,GO:0051962,GO:0060070,GO:0060255,GO:0060271,GO:0060284,GO:0060341,GO:0060359,GO:0060429,GO:0060548,GO:0060562,GO:0060627,GO:0060628,GO:0060631,GO:0060828,GO:0060903,GO:0061024,GO:0061025,GO:0061136,GO:0061512,GO:0061919,GO:0061982,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070192,GO:0070201,GO:0070727,GO:0070848,GO:0070887,GO:0070925,GO:0071214,GO:0071310,GO:0071363,GO:0071478,GO:0071482,GO:0071495,GO:0071539,GO:0071684,GO:0071704,GO:0071840,GO:0071944,GO:0072347,GO:0072698,GO:0080090,GO:0080134,GO:0080135,GO:0090066,GO:0090068,GO:0090087,GO:0090114,GO:0090174,GO:0090263,GO:0090304,GO:0090596,GO:0097159,GO:0097367,GO:0097435,GO:0097458,GO:0097711,GO:0098588,GO:0098657,GO:0098687,GO:0098791,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0104004,GO:0110053,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0140013,GO:0140056,GO:0140096,GO:0150034,GO:0198738,GO:1900180,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901698,GO:1901700,GO:1901800,GO:1901987,GO:1901990,GO:1902003,GO:1902004,GO:1902749,GO:1902903,GO:1902905,GO:1902991,GO:1902993,GO:1903046,GO:1903047,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903530,GO:1903827,GO:1904338,GO:1904340,GO:1904589,GO:1904956,GO:1904958,GO:1905037,GO:1905114,GO:1905424,GO:1905426,GO:1905508,GO:1905515,GO:1905952,GO:1990089,GO:1990090,GO:1990904,GO:2000026,GO:2000050,GO:2000052,GO:2000058,GO:2000060,GO:2000241,GO:2000243,GO:2000369,GO:2000370,GO:2000831,GO:2001020,GO:2001159
EggNOG free text desc.	Belongs to the protein kinase superfamily
EggNOG OGs	2XBE6@2836,KOG1164@1,KOG1164@2759
EC	2.7.11.1
COG Functional cat.	T
Best tax level	Bacillariophyta
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000,ko01001,ko03009,ko03016,ko03036
Ec32 ortholog description	Casein kinase
Ec32 ortholog	Ec-13_001990.1
Exons	6
Model size	703
Cds size	702
Stop	0
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1378.2863.1	prot_L-elsbetiae_contig1378.2863.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig1378 2089..5691 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815538.6888492-CDS-L-elsbetiae_contig1378:2088..2130	1622815538.6888492-CDS-L-elsbetiae_contig1378:2088..2130	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 2089..2130 +
1691682947.6699939-CDS-L-elsbetiae_contig1378:2088..2130	1691682947.6699939-CDS-L-elsbetiae_contig1378:2088..2130	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 2089..2130 +
1622815538.7008727-CDS-L-elsbetiae_contig1378:2465..2549	1622815538.7008727-CDS-L-elsbetiae_contig1378:2465..2549	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 2466..2549 +
1691682947.6820378-CDS-L-elsbetiae_contig1378:2465..2549	1691682947.6820378-CDS-L-elsbetiae_contig1378:2465..2549	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 2466..2549 +
1622815538.715802-CDS-L-elsbetiae_contig1378:2745..2970	1622815538.715802-CDS-L-elsbetiae_contig1378:2745..2970	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 2746..2970 +
1691682947.6900496-CDS-L-elsbetiae_contig1378:2745..2970	1691682947.6900496-CDS-L-elsbetiae_contig1378:2745..2970	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 2746..2970 +
1622815538.7272806-CDS-L-elsbetiae_contig1378:3101..3196	1622815538.7272806-CDS-L-elsbetiae_contig1378:3101..3196	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 3102..3196 +
1691682947.7017095-CDS-L-elsbetiae_contig1378:3101..3196	1691682947.7017095-CDS-L-elsbetiae_contig1378:3101..3196	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 3102..3196 +
1622815538.7377734-CDS-L-elsbetiae_contig1378:3426..3600	1622815538.7377734-CDS-L-elsbetiae_contig1378:3426..3600	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 3427..3600 +
1691682947.714514-CDS-L-elsbetiae_contig1378:3426..3600	1691682947.714514-CDS-L-elsbetiae_contig1378:3426..3600	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 3427..3600 +
1622815538.7479434-CDS-L-elsbetiae_contig1378:5609..5691	1622815538.7479434-CDS-L-elsbetiae_contig1378:5609..5691	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 5610..5691 +
1691682947.7245917-CDS-L-elsbetiae_contig1378:5609..5691	1691682947.7245917-CDS-L-elsbetiae_contig1378:5609..5691	Laminarionema elsbetiae ELsaHSoW15	CDS	L-elsbetiae_contig1378 5610..5691 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig1378:2089..5691+
coding sequence from alignment at L-elsbetiae_contig1378:2089..5691+

protein sequence of mRNA_L-elsbetiae_contig1378.2863.1

>prot_L-elsbetiae_contig1378.2863.1 ID=prot_L-elsbetiae_contig1378.2863.1|Name=mRNA_L-elsbetiae_contig1378.2863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=234bp
MERKQAISIQQLCQGLPQQFAEYLAYCRSLKFEAKPNVPYLQGLLRELYK
VQGHSSSGAPQWDWSKFDAQPGSITGDAVADNACAENSTPIKAGETPQVP
GLWQALPVEAKATIKANIPILGSKEDEGEVTKSGIGSEREGLGASPISNC
QLELGNAERDNNGAELAGRISTSSATNSGGGVASGSSAPRACRGQTAGHS
TTGWSMWNLRPKTSGTFWGRGTPSSPGPGAVVTG

mRNA from alignment at L-elsbetiae_contig1378:2089..5691+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig1378.2863.1 ID=mRNA_L-elsbetiae_contig1378.2863.1|Name=mRNA_L-elsbetiae_contig1378.2863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3603bp|location=Sequence derived from alignment at L-elsbetiae_contig1378:2089..5691+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCGGAAGCAGGCGATTAGTATCCAACAACTTTGTCAGGTTAGCTT
TGATGCGGAAGCAACAAAACGAGCGAATTCTGATTCGAAGACTTCTAATC
AGAAAAGAGTGGACCTTTGAAAGAAAAGCATATTTCGCCTTGCATCAGAT
CGACTGGTCAAATCGAGATGGCACTGCCGGCCGAACTCAACAAGCAAGAT
GTGTCAGGTCTTAACGTTGTTACTCGTCTAATTCAATAACTGCATTTTTT
TCAGACGTTGGCAACAGGTTGTACTCTCTGTTCTCATGACGCCCATGTCT
ACTTACAAAAGGGTTTTTGCATTAGGACACAACTCGAATGCGCGGCGGAA
TCTTGCGCGGCGGAATCTTGATCTCAGGGTCTTCCGCAACAATTCGCGGA
GTATTTGGCGTATTGCCGGTCCCTTAAGTTCGAAGCTAAGCCCAACGTGC
CATATCTCCAGGTGAGCGCAGAGAGTTTCAAATATGACCGCTAATTTTCC
CATCTGTTGTTCTCTAGTTGAAGCATATTTCGCGCGTAGTGTGTGCTGCG
TTACCTATACGTGCTGTTTACCACCTTCCAGACCAGCACGGCACAAGTTG
AGAAATTCCAAAAGGATCGGCGCAACATGAAGCGCGTGTTCGTCGTGTCT
TCCACAGGGTTTGCTGCGCGAGTTGTACAAGGTGCAGGGACACTCATCCT
CCGGCGCGCCACAATGGGATTGGAGTAAGTTCGATGCCCAGCCTGGGAGT
ATTACTGGGGATGCGGTTGCCGACAATGCATGTGCGGAAAACTCTACTCC
CATCAAGGCTGGTGAAACTCCGCAAGTGCCTGGCCTATGGCAGGCACTCC
CCGTCGAAGCTAAGGCTACCATCAAGGCGAATGTAAGGCGTTTGGACATA
CAATAAGATAATGGTGTGGAGCTGCTACAGGGTTGATTATATATATGTTA
AGGTAGCAAACAGCTGCATGAAGATTATTGTAAATCTTTTGCTGCATTAA
TATTTTACTGCAGATACCAATCCTGGGTAGCAAAGAAGATGAAGGAGAAG
TGACCAAGTCAGGCATTGGCAGCGAACGCGAGGGGCTTGGGGCGTCTCCG
ATATCGAAGTGGGTGGTGGCTGAAGATGATGGGAAATACAATTCAAACGG
TGCACATGACAGGTACACTGTCGTAAGCGATCAAGTTCGAGAGGGTTTTT
CGGGCATTTTGTTTTTGGAGGTGGTTCGATCTTTTGGGCCTGTTGCTCGC
GTTACAATCAAAGGTGTGGATACGCCCCGGACAAATGACGCCGAATATAT
CGCTACGCCGCGTCTTGTCTGCATCATTGTTTCCAAAGTTGTCAGTTAGA
ACTGGGGAATGCAGAAAGGGACAACAATGGCGCTGAATTGGCAGGCAGGA
TAAGCACCAGTTCGGCGACCAACAGCGGGGGAGGAGTTGCGAGCGGTAGT
AGTGCACCCCGAGCGTGTAGAGGACAAACTGCTGGACACAGCACAACAGG
GTGGTCCATGTGGTGAGCATATCGCCCTGGGACCTTTTTCATAGCGGATT
AACCACATTATGTGCAGTGAATCCTACGATGTAGGGGTATTGCACTGCAA
TCAACGCGAGTTCAAGTATCTAATGCTCGAGCGTGTAGATGGTGGTCATG
CCTACAAGGTATTGCCCGAGCTTATGCTCAAGCTCCATCCAAGTAATCGA
GAGGGGGGGGAAGCTACGGCTTCTGAGAGGCCACGGGCCGATTTGGTTGT
GTTCGGATTTAGAACCGACACACAGCGCGACGGCACTGAAAGAGACCGGT
CTAAGCTATCCCGATATTGCGGTAATATTTAATATCTGCGCACACGCCTT
GCGCCCAACATAAAAGCACCACTTTGGTCAGATCAAGCATCTAAAACCAA
GGGTGATGACAAAATTTCGATGCAGATCGTCAGTTGTGTCCAAAATTGGC
GCCCTGTTTGGAACTGGTGGCGTCACTCGTTAGCCCATACCAAGCCACCA
AAGTAACGGTTGCTCTAGCGAGAAGAAGAACGAGCAACAAATAGCAAATG
GAAGATGGTGTCATGCGTTAAATAGCATACAGCAACTCACATGAACTACC
TGTATGAGTATGTACCACTGCTGTGAGCGATAGAATTGTGGCCACTACAT
ACGTTGTGCACACAGCTGTTGTTTTATTCCTGCGGCCGTTTGACACCCCT
TGGTTGCCAAGTATAAGCCAATTTCACGTGCTCTCCAAATACAGCACTCT
CTCGACCGGCGCGGCCCCCTCTTGATTGAAGCAGCCCACTGCTGATTTTC
ACCGAATACATCCGATGAATGGAGATCGTACTATTCCCGGTCTTTACCCG
ATACATGCGCTACCGAAGTAGACAATGTGTTGCGGTCTGGTGTGTCTCCG
CATAATATCACTTCGGCTACAAAATTGCGGCGTATTTAGAGTTCTGCGAG
ATCCGATATCGCGTGTGCTCAATAGGGATTTTCGTGCGTCTCCCAAACAA
CCGCCACCGATCAACGGCCATAGTCGCAGAAGAGCGAGCCTAGGATTGTC
CGGAAGCCTTTGACACTACGGTCGGCATGCACATCGACGATTCTGTTGAC
GGAGTGTGGTCGTATTCTAGGCCGACGGAAGGCACAATACTATTGAGTGT
AGCCAACTCTAAATAATATATGGGCTGTTTGTATTGTACTTTTTTACCAC
AAGTGTTTGGTTTTGTGAAGTACATCTCGACGTTTTGGCTCATACCCACT
CAACAAGAATGCCTGTTGATATATGTTCCTCAATAAACCGATGTTGGTGG
CGTTGGGCGGTCGATAACATGTCACTGTGGAGTTGAATGATGAAAGGCTT
ATTCTTGCCGCGTACTCGAATAAAGCTGAAAAGCTCGTGAGTACGAAACT
TCGACGTAATCACGTTGACGAGGGAAAGGGACAGCTGAACCCTTCTCGCG
ATGAAAATGAAGGCAAGCACCGCAGGAGGAAGGTGGGGCAAAAAAAGAAA
ACAAAGAAGAAAAAGGCCCAGTGTTCACCCCCTCCTGTGTGACCGCGGTT
GGTTCTAGTTGTAGTACCTCTAAGTGCAACGCAAGGTGTAGTACACGTCT
CCACTTGGGGGGACTGTCGCCAAAAATAAATAAATGGGAAGGACACACAC
ACACTCGAAATCGACTACGGACGTGTACTCTTTGGTTTACACACCTTGCA
CAGTGCCCCAACACTACACTTATAACTAACTCTAAACAAATACTGGAGTA
TGCGATAGCGCCTGCCTGGCATTGGTGAGGTTCACGACGCGCCGTCTGAA
TGAAGAACCGGTGTGAACATTGAAACCGATACCTTGGCCGACGAAATGGC
AAAGCGCCGTGAGTGCGGTCGGAACTCTACTGGTTTACCATTATTACAAG
TGCTATTACTACCCCAAAGTTCCAAAGTTGAGTATCATTCACCGAAGCTG
TGCTGATCCGCTCCCTAGTTTATCCCTCTAACAACTCTGCCGAATGTGAA
TGGTTCGATTGTATCCGGTAGGAATTTACGACCTAAAACCTCAGGAACGT
TCTGGGGACGAGGGACCCCGTCGTCGCCAGGGCCTGGAGCTGTGGTTACG
GGA

Coding sequence (CDS) from alignment at L-elsbetiae_contig1378:2089..5691+

>mRNA_L-elsbetiae_contig1378.2863.1 ID=mRNA_L-elsbetiae_contig1378.2863.1|Name=mRNA_L-elsbetiae_contig1378.2863.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1404bp|location=Sequence derived from alignment at L-elsbetiae_contig1378:2089..5691+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGCGGAAGCAGGCGATTAGTATCCAACAACTTTGTCAGATGGAGCG
GAAGCAGGCGATTAGTATCCAACAACTTTGTCAGGGTCTTCCGCAACAAT
TCGCGGAGTATTTGGCGTATTGCCGGTCCCTTAAGTTCGAAGCTAAGCCC
AACGTGCCATATCTCCAGGGTCTTCCGCAACAATTCGCGGAGTATTTGGC
GTATTGCCGGTCCCTTAAGTTCGAAGCTAAGCCCAACGTGCCATATCTCC
AGGGTTTGCTGCGCGAGTTGTACAAGGTGCAGGGACACTCATCCTCCGGC
GCGCCACAATGGGATTGGAGTAAGTTCGATGCCCAGCCTGGGAGTATTAC
TGGGGATGCGGTTGCCGACAATGCATGTGCGGAAAACTCTACTCCCATCA
AGGCTGGTGAAACTCCGCAAGTGCCTGGCCTATGGCAGGCACTCCCCGTC
GAAGCTAAGGCTACCATCAAGGCGAATGGTTTGCTGCGCGAGTTGTACAA
GGTGCAGGGACACTCATCCTCCGGCGCGCCACAATGGGATTGGAGTAAGT
TCGATGCCCAGCCTGGGAGTATTACTGGGGATGCGGTTGCCGACAATGCA
TGTGCGGAAAACTCTACTCCCATCAAGGCTGGTGAAACTCCGCAAGTGCC
TGGCCTATGGCAGGCACTCCCCGTCGAAGCTAAGGCTACCATCAAGGCGA
ATATACCAATCCTGGGTAGCAAAGAAGATGAAGGAGAAGTGACCAAGTCA
GGCATTGGCAGCGAACGCGAGGGGCTTGGGGCGTCTCCGATATCGAAATA
CCAATCCTGGGTAGCAAAGAAGATGAAGGAGAAGTGACCAAGTCAGGCAT
TGGCAGCGAACGCGAGGGGCTTGGGGCGTCTCCGATATCGAATTGTCAGT
TAGAACTGGGGAATGCAGAAAGGGACAACAATGGCGCTGAATTGGCAGGC
AGGATAAGCACCAGTTCGGCGACCAACAGCGGGGGAGGAGTTGCGAGCGG
TAGTAGTGCACCCCGAGCGTGTAGAGGACAAACTGCTGGACACAGCACAA
CAGGGTGGTCCATGTGTTGTCAGTTAGAACTGGGGAATGCAGAAAGGGAC
AACAATGGCGCTGAATTGGCAGGCAGGATAAGCACCAGTTCGGCGACCAA
CAGCGGGGGAGGAGTTGCGAGCGGTAGTAGTGCACCCCGAGCGTGTAGAG
GACAAACTGCTGGACACAGCACAACAGGGTGGTCCATGTGGAATTTACGA
CCTAAAACCTCAGGAACGTTCTGGGGACGAGGGACCCCGTCGTCGCCAGG
GCCTGGAGCTGTGGTTACGGGAGAATTTACGACCTAAAACCTCAGGAACG
TTCTGGGGACGAGGGACCCCGTCGTCGCCAGGGCCTGGAGCTGTGGTTAC
GGGA