prot_L-elsbetiae_contig1377.2859.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1377.2859.1
Unique Nameprot_L-elsbetiae_contig1377.2859.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length854
Homology
BLAST of mRNA_L-elsbetiae_contig1377.2859.1 vs. uniprot
Match: D8LDS9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDS9_ECTSI)

HSP 1 Score: 751 bits (1940), Expect = 1.450e-260
Identity = 468/868 (53.92%), Postives = 538/868 (61.98%), Query Frame = 0
Query:    1 MSRGNRAGRKSDAGSATDAATAYRHALQLCGEGTYGKALTLFNRAITFRVDCSHYFAARANCKQQAMGQYTDAYHDYVSAIRLNHRKCTYFSCRALCLIKMGKLDAALLDFSKACELEPTVAVYHYQKASLLHHRLARPGEAILPYAECLAKAGPGDTAMVLRCLQAKGACLFEEGRAAEAVADLSRAVEMSDASPASLHYLAKALKAMGREKRALAVLEEAIDKWEDTPRAAAKGG--------RHEAFFDRGVIRLQRGDDAGALSDFDQAVLLSGGAKGGYFVQRARARARVAMRSNSREEAMAGVQDIEKAMELESSNPEFLFTAGVLCSRMGEYERALGHLRLLLEFFEEKAAASREHKGRGRKEAVTSRAACEFEDFTASIAVHRRRPEGYLLRGRSLAGLSDHERAIKDFTTALALLGSENIENG-----LGEEGSRFREGSSAAWLQG--GEEKEXXXXXXXXXXXXXXXXXXTDDSSNANRGARQERCVPRVSNASDGYKGRENQPCFGEPGQKEESHGEERGGSKPNRSDSSSRRRSQGADGEDGMSEGGSVIGACHYARALSLQQLGRHADAASDFDAAIAEGPVSWQRLWHRAICLAELGEAFQLSAVMDLQACVSMAEKEEPPPEVRKLNFLFQVGLAYYRLGQSSTALGCFDRSRKEVLRRQLLQHDSSTEDPSLHYHRGLCLMKADELEEAEDAFSLAIECRKRRVRGKAPSTADGTDTRMQAAHHRERGRVRQLLRDFDGARADFTACLSRSRQQQQQTPATARGSSPSGGATGGCAPGSSSHDARTLFLRGWANKALRCLDQAAADFEAARRLEPLHPHLSVDYRNIFDTELVVVDDMEPLAQAPALFHSW 853
            M +G +   K++   ATDAATAY   L+LCGEG YGKAL  F+RAI FRVDCSHYFAARANCKQ AMG++ DAYHDYVSAIRLN  KCT                         CELEPTVAV+HYQ+ASLLHHRLARPG+A++ Y ECLA  G  D+AM LRCL AKGACLFEEGRA EAVADLSRAVEMSD SPASL YLAKALKA+G+EKRAL VL EA+ KWE    AA  GG        RHEAFFDRGVIRL  GDDAGAL DF++AV LS G +G YFVQRARARARVAMRS  REEAMAGV+DIEKAMELES+NPEFLFTAGVLCSRMGEYERA+GHL+LLL  F+++ AAS   K     + V SRAACEFE+FTASIAV+ +RPEG+LLRGRSLAGLS HE+AI+DFTTAL++LGS++  +      LG      R+ S +       G+EKE                  T+     +     E C PRV     G    E  P      +  ESHG+E  G      ++S RR S+  +  DGM EGGSV+GACHYARALSLQQLGRHADA +DFD AI+EGPVSWQR WHRA CL  LGEA++ SAV DL+AC+SMAEK EPPPE+R  NFLFQVGLAY RLG+ + AL  FD++ KE +R    Q D+ TE P                                            TD                                                               SS  A TLF RGWANKA+  L++AAADFEAAR L   +PHLSV+YRN FDTELVVVDD +P  Q PALFHSW
Sbjct:    1 MGKGKQGASKTEGVCATDAATAYNQGLKLCGEGAYGKALCSFDRAIAFRVDCSHYFAARANCKQ-AMGKFVDAYHDYVSAIRLNASKCTXXXXXXXXXXXXXXXXXXXXXXXXXCELEPTVAVHHYQRASLLHHRLARPGQAVISYGECLANTGEFDSAMTLRCLHAKGACLFEEGRAEEAVADLSRAVEMSDPSPASLQYLAKALKAVGQEKRALTVLGEALKKWEHMAPAAQLGGGPSSDNTGRHEAFFDRGVIRLGHGDDAGALLDFNKAVELSNGGRGEYFVQRARARARVAMRSEGREEAMAGVEDIEKAMELESNNPEFLFTAGVLCSRMGEYERAMGHLQLLLRSFDKQEAASTREKTETGNKDVASRAACEFENFTASIAVNGQRPEGFLLRGRSLAGLSSHEQAIRDFTTALSILGSKSARSSRTTSLLGGADGCCRDDSVSQRKDEAKGDEKEVDARNAKPEQDGDTKGNRTNPEVMLS-----ETCSPRVEYNRAGTDPHEASPA---ETKHPESHGDE--GHLEESREASCRRDSRSGEVGDGMGEGGSVVGACHYARALSLQQLGRHADAVTDFDVAISEGPVSWQRFWHRATCLVGLGEAYRASAVRDLRACMSMAEKGEPPPEMR--NFLFQVGLAYLRLGRFALALELFDQAWKEEVRLPE-QRDTKTEGP--------------------------------------------TDL-------------------------------------------------------------GSSLQAHTLFRRGWANKAMGNLEEAAADFEAARLL---NPHLSVNYRNAFDTELVVVDDGKPFTQPPALFHSW 746          
BLAST of mRNA_L-elsbetiae_contig1377.2859.1 vs. uniprot
Match: A0A2D4C8C9_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8C9_PYTIN)

HSP 1 Score: 74.3 bits (181), Expect = 7.070e-10
Identity = 78/286 (27.27%), Postives = 124/286 (43.36%), Query Frame = 0
Query:  554 ARALSLQQLGRHADAASDFDAAIAEGPVSWQRLWHRAICLAELGEAFQLSAVMDLQACVSMAEKEEPPPEVRKLNFLFQVGLAYYRLGQSSTALGCFDRSRKEVLRRQLLQHDSSTEDPSLHYHRGLCLMKADELEEAEDAFSLAIECRKRRVRGKAPSTADGTDTRMQAAHHRERGRVRQLLRDFDGARADFTACLSRSRQQQQQTPATARGSSPSGGATGGCAPGSSSHDARTLFLRGWANKALRCLDQAAADFEAARRLEPLHPHLSVDYRNIFDTELVVVDD 839
            ARA++ + LGR   A  D    +A  P +    +HR +CL        L +     A V++ E +   P+    + L+ +GL Y+R    S+ +     + +   R +++          +HYH GL      +   A   F+ A+E   R      P  +DG  T ++  H  ER +  QL R +  A  DFTA + R+                              ++A   F RG+A KAL  L  AA+DFE A+ L+P +P L+V Y+ + DTE V++ D
Sbjct:  542 ARAMAHRGLGRLELAVEDLTICLALDPENDVFQYHRGLCL--------LESRRPEDALVNLHEAQRANPQ--DAHVLYLLGLCYFRARDPSSCVKYMTAALQSQPRAEIVA--------DIHYHIGLSHAIEGDNAGAIPHFTSALEHAGR------PDVSDGHAT-LRFLH--ERAKALQLERRYHDAIEDFTAVIRRN-----------------------------PNNAHAYFRRGFAWKALGELSAAASDFEKAKLLDPSNPKLAVKYKELRDTECVILCD 771          
BLAST of mRNA_L-elsbetiae_contig1377.2859.1 vs. uniprot
Match: A0A5D6XF25_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF25_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.330e-5
Identity = 62/208 (29.81%), Postives = 95/208 (45.67%), Query Frame = 0
Query:  637 YYRLGQSSTALGCFDRSRKEVLRRQLLQHDSSTED-PSLHYHRGL-CLMKADELEEAEDAFSLAIECRKRRVRGKAPSTADGTDTRM-----QAAHHRERGRVRQLLRDFDGARADFTACLSRSRQQQQQTPATARGSSPSGGATGGCAPGSSSHDARTLFLRGWANKALRCLDQAAADFEAARRLEPLHPHLSVDYRNIFDTELVVV 837
            YY  G++S        SRK +  R+ L+H  + E  P + YH GL C +++  +  A ++F+ A+E        +A S A     R      Q  +  ER +  QL R +D A ADF+  L+ +                              ++A   F RG+A+KA   L  AAADFEAA+ L+P +  L V+Y  + DTE V++
Sbjct:  603 YYHEGETS-------ESRKFM--RRALRHKPAPETLPDVFYHIGLSCALESRHMA-AIESFTAALE------HSRALSAASSASERAALLAAQLRYVHERAKALQLERYYDEAVADFSFVLAHN-----------------------------PNNAHACFRRGFAHKARGDLAAAAADFEAAKMLDPTNLQLVVNYHELRDTECVIL 765          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1377.2859.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LDS9_ECTSI1.450e-26053.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2D4C8C9_PYTIN7.070e-1027.27Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A5D6XF25_9STRA2.330e-529.81Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availablePFAMPF13432TPR_16coord: 553..598
e-value: 2.4E-4
score: 21.7
NoneNo IPR availablePFAMPF14559TPR_19coord: 172..234
e-value: 1.0E-5
score: 25.9
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 280..415
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 171..268
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 629..824
coord: 553..699
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 32..144
coord: 553..699
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 171..268
coord: 32..144
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 629..824
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 280..415
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 196..229
e-value: 23.0
score: 11.8
coord: 627..660
e-value: 290.0
score: 2.1
coord: 88..121
e-value: 0.0026
score: 27.0
coord: 672..705
e-value: 0.054
score: 22.6
coord: 315..348
e-value: 32.0
score: 10.5
coord: 162..195
e-value: 23.0
score: 11.8
coord: 549..582
e-value: 9.9
score: 15.0
coord: 53..87
e-value: 260.0
score: 2.5
coord: 386..419
e-value: 0.16
score: 21.1
coord: 723..756
e-value: 29.0
score: 10.9
coord: 239..272
e-value: 30.0
score: 10.8
coord: 786..819
e-value: 1.8
score: 17.6
coord: 19..52
e-value: 470.0
score: 0.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 5..81
e-value: 9.6E-8
score: 33.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 153..235
e-value: 4.8E-10
score: 41.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 543..832
e-value: 2.4E-22
score: 81.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 82..152
e-value: 4.7E-5
score: 25.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 236..422
e-value: 3.5E-14
score: 54.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 165..415
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 19..224
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 552..819
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 672..705
score: 7.341
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 19..419
score: 19.905

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1377contigL-elsbetiae_contig1377:6400..19093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1377.2859.1mRNA_L-elsbetiae_contig1377.2859.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1377 6400..20601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1377.2859.1 ID=prot_L-elsbetiae_contig1377.2859.1|Name=mRNA_L-elsbetiae_contig1377.2859.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=854bp
MSRGNRAGRKSDAGSATDAATAYRHALQLCGEGTYGKALTLFNRAITFRV
DCSHYFAARANCKQQAMGQYTDAYHDYVSAIRLNHRKCTYFSCRALCLIK
MGKLDAALLDFSKACELEPTVAVYHYQKASLLHHRLARPGEAILPYAECL
AKAGPGDTAMVLRCLQAKGACLFEEGRAAEAVADLSRAVEMSDASPASLH
YLAKALKAMGREKRALAVLEEAIDKWEDTPRAAAKGGRHEAFFDRGVIRL
QRGDDAGALSDFDQAVLLSGGAKGGYFVQRARARARVAMRSNSREEAMAG
VQDIEKAMELESSNPEFLFTAGVLCSRMGEYERALGHLRLLLEFFEEKAA
ASREHKGRGRKEAVTSRAACEFEDFTASIAVHRRRPEGYLLRGRSLAGLS
DHERAIKDFTTALALLGSENIENGLGEEGSRFREGSSAAWLQGGEEKEGA
RRNGDDVAAAASEQNKTDDSSNANRGARQERCVPRVSNASDGYKGRENQP
CFGEPGQKEESHGEERGGSKPNRSDSSSRRRSQGADGEDGMSEGGSVIGA
CHYARALSLQQLGRHADAASDFDAAIAEGPVSWQRLWHRAICLAELGEAF
QLSAVMDLQACVSMAEKEEPPPEVRKLNFLFQVGLAYYRLGQSSTALGCF
DRSRKEVLRRQLLQHDSSTEDPSLHYHRGLCLMKADELEEAEDAFSLAIE
CRKRRVRGKAPSTADGTDTRMQAAHHRERGRVRQLLRDFDGARADFTACL
SRSRQQQQQTPATARGSSPSGGATGGCAPGSSSHDARTLFLRGWANKALR
CLDQAAADFEAARRLEPLHPHLSVDYRNIFDTELVVVDDMEPLAQAPALF
HSW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom