prot_L-elsbetiae_contig1369.2806.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1369.2806.1
Unique Nameprot_L-elsbetiae_contig1369.2806.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length361
Homology
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: PSBA_ECTSI (Photosystem II protein D1 n=1129 Tax=Eukaryota TaxID=2759 RepID=PSBA_ECTSI)

HSP 1 Score: 699 bits (1805), Expect = 3.730e-254
Identity = 342/360 (95.00%), Postives = 350/360 (97.22%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            MVATLER E    W  FA+WITSTENRLYIGWFGCLMIPTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIG+HFYPIWEAAS++EWLYNGGPYQLIV HFLIGVAC+MGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILM PFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSE+ESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLT+LGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPS+VG
Sbjct:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: A0A1N7TJI8_9PHAE (Photosystem II protein D1 n=412 Tax=Eukaryota TaxID=2759 RepID=A0A1N7TJI8_9PHAE)

HSP 1 Score: 698 bits (1801), Expect = 1.520e-253
Identity = 338/360 (93.89%), Postives = 349/360 (96.94%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            MVATLER E    W  FA+WITSTENRLYIGWFGCLMIPTLLTA SCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIG+HFYPIWEA S++EWLYNGGPYQL+V HFLIGVAC+MGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSE+ESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPV+ IWLTSLG+STMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNE+LPVA+SAPSIVG
Sbjct:    1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEALSIEEWLYNGGPYQLVVFHFLIGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVIAIWLTSLGISTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVSAPSIVG 360          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: PSBA_PHATC (Photosystem II protein D1 n=590 Tax=root TaxID=1 RepID=PSBA_PHATC)

HSP 1 Score: 693 bits (1789), Expect = 1.020e-251
Identity = 333/360 (92.50%), Postives = 349/360 (96.94%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            M ATLER +S++LWERF  WITSTENRLYIGWFGCLM PTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNII+GAVIPSSNAIG+HFYPIWEAASVDEWLYNGGPYQLIVLHFL+GVA YMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLT++GVSTMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP++ G
Sbjct:    1 MTATLERRQSVSLWERFCGWITSTENRLYIGWFGCLMFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIITGAVIPSSNAIGIHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGVSTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: A0A023JEK8_9STRA (Photosystem II protein D1 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A023JEK8_9STRA)

HSP 1 Score: 683 bits (1762), Expect = 1.330e-247
Identity = 326/360 (90.56%), Postives = 346/360 (96.11%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            M ATLER ES++LWERF  WITSTENRLYIGWFGC+M PTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIG+H YPIWEAAS+DEWLYNGGPYQLIVLHF IGV  YMGREWELSYRLGMRPWIFVAFSAPVAAA+AVF+VYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES ++GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLT++G+STMAFNLNGFNFNQSVVDS+GRVINTWADIINRADLGMEVMHERNAHNFPLDLAS E+LPVA++AP++ G
Sbjct:    1 MTATLERRESVSLWERFCGWITSTENRLYIGWFGCVMFPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGIHLYPIWEAASIDEWLYNGGPYQLIVLHFFIGVCTYMGREWELSYRLGMRPWIFVAFSAPVAAAAAVFVVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESPDFGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVVGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGEVLPVALTAPAVNG 360          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: A0A7S2RD40_9STRA (Photosystem II protein D1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RD40_9STRA)

HSP 1 Score: 682 bits (1759), Expect = 5.990e-247
Identity = 327/360 (90.83%), Postives = 347/360 (96.39%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            M ATLER ESI+LWERF SWITSTENRLYIGWFG +MIPTLLTATSC+II FIAAPPVDIDGIREPVAGSL+YGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFL+GVA YMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET++ ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPV+GIW+T++G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRADLG+EVMHERNAHNFPLDLA+ E+ PVA+SAP++ G
Sbjct:   13 MTATLERRESISLWERFCSWITSTENRLYIGWFGVVMIPTLLTATSCFIIGFIAAPPVDIDGIREPVAGSLMYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLLGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTDSESTNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLALWPVLGIWITAMGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRADLGIEVMHERNAHNFPLDLAAGEVFPVAVSAPAVNG 372          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: A0A451FLR3_9STRA (Photosystem II protein D1 n=179 Tax=Eukaryota TaxID=2759 RepID=A0A451FLR3_9STRA)

HSP 1 Score: 671 bits (1731), Expect = 7.080e-243
Identity = 320/358 (89.39%), Postives = 342/358 (95.53%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSI 358
            M ATLER E  +LWERF SWITSTENRLYIGWFG LMIP LLTATSC+II FIAAPPVDIDGIREPVAGSLLYGNNIISGA++PSSNAIG+HFYPIWEAAS+DEWLYNGGPYQLIV HFL+GVAC+MGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET +  S NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLA WPVVGIWLT+LG+STMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LG+EVMHERNAHNFPLDLA + +LPVA++AP++
Sbjct:    1 MTATLERREGTSLWERFCSWITSTENRLYIGWFGVLMIPLLLTATSCFIIGFIAAPPVDIDGIREPVAGSLLYGNNIISGAIVPSSNAIGIHFYPIWEAASLDEWLYNGGPYQLIVFHFLLGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETEDGVSANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAIWPVVGIWLTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAVSNVLPVALNAPAV 358          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: A0A3G2R049_9STRA (Photosystem II protein D1 n=23 Tax=cellular organisms TaxID=131567 RepID=A0A3G2R049_9STRA)

HSP 1 Score: 662 bits (1708), Expect = 1.680e-239
Identity = 318/360 (88.33%), Postives = 342/360 (95.00%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            M ATLER ES+ +WERF SWITS ENRLYIGWFG +MIPTLLTAT+C+IIAFIAAPPVDIDGIREPVAGSL+YGNNII+GA+IPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFL GVACY+GREWELS+RLGMRPWIFVAFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIWLT+LG+STMAFNLNGFNFNQS+VDS+GRVI+TWADI+NRA+LGMEVMHERNAHNFPLDLA        ++AP IVG
Sbjct:    1 MTATLERYESLNIWERFCSWITSLENRLYIGWFGVVMIPTLLTATTCFIIAFIAAPPVDIDGIREPVAGSLMYGNNIITGAIIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLTGVACYLGREWELSFRLGMRPWIFVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETAEGESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWLTALGISTMAFNLNGFNFNQSIVDSQGRVISTWADILNRANLGMEVMHERNAHNFPLDLA--------VTAPVIVG 352          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: PSBA_CYAM1 (Photosystem II protein D1 n=18 Tax=Eukaryota TaxID=2759 RepID=PSBA_CYAM1)

HSP 1 Score: 660 bits (1702), Expect = 1.860e-238
Identity = 315/358 (87.99%), Postives = 341/358 (95.25%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSI 358
            M ATL+R  S  LWERF +WITSTENRLYIGWFG LMIP LLTAT  +IIAF+AAPPVDIDGIREPV+GSL YGNNII+GAV+P+SNAIG+HFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVA YMGREWELSYRLGMRPWI VAFSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHMAGVAGVFGG+LFSAMHGSLVTSSLIRETSE ES+N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIWLT++G+STMAFNLNGFNFNQSVVDSEGRVINTWADI+NRA+LG+EVMHERNAHNFPLDLASN ++PVA++APS+
Sbjct:    1 MTATLQRRASANLWERFCAWITSTENRLYIGWFGVLMIPCLLTATCVFIIAFVAAPPVDIDGIREPVSGSLFYGNNIITGAVVPTSNAIGLHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVASYMGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETSENESLNNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVGIWLTAIGISTMAFNLNGFNFNQSVVDSEGRVINTWADILNRANLGIEVMHERNAHNFPLDLASNSVVPVALTAPSV 358          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: PSBA_EMIHU (Photosystem II protein D1 n=71 Tax=root TaxID=1 RepID=PSBA_EMIHU)

HSP 1 Score: 656 bits (1692), Expect = 6.210e-237
Identity = 312/360 (86.67%), Postives = 336/360 (93.33%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            M  TLER ES + WE+F +WITSTENRLYIGWFGCLM PTLL+A S YIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAV+PSSNAIGVHFYPIWEAAS+DEWLYNGG YQL+VLHF IGV  Y+GREWELSYRLGMRPWI VAFSAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES NYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL AWPVVGIW T++GV+TMAFNLNGFNFNQSVVDS+GRVINTWADI+NR++LGMEVMHERNAHNFPLDLA+ E LPVA+ AP++  
Sbjct:    1 MTTTLERRESASFWEQFCAWITSTENRLYIGWFGCLMFPTLLSAISAYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVVPSSNAIGVHFYPIWEAASIDEWLYNGGTYQLVVLHFFIGVCAYIGREWELSYRLGMRPWICVAFSAPVAAAAAVFVIYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWFTAMGVATMAFNLNGFNFNQSVVDSQGRVINTWADILNRSNLGMEVMHERNAHNFPLDLAAGESLPVALVAPAVAA 360          
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Match: A0A0B5W3P8_9FLOR (Photosystem II protein D1 n=23 Tax=Ceramiales TaxID=2802 RepID=A0A0B5W3P8_9FLOR)

HSP 1 Score: 656 bits (1692), Expect = 6.690e-237
Identity = 317/360 (88.06%), Postives = 338/360 (93.89%), Query Frame = 0
Query:    1 MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYIIAFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGFNFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSIVG 360
            M A LER ES +LWERF +WITSTENRLYIGWFG +MIPTLLTATS +IIAF+AAPPVDIDGIREPVAGSLLYGNNIISGAVIPSS AIG+HFYPIWEAAS+DEWLYNGGPYQLIVLHFL+GV CY+GREWELSYRLGMRPWI VAF+APVAAA+AVFLVYPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFH  GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL  WPV+GIWLT++ VSTMAFNLNGFNFNQSVVDS+GRVINTWADI+NRA+LGMEVMHERNAHNFPLDLAS E LP+A+ APSI G
Sbjct:    3 MTAILERRESASLWERFCTWITSTENRLYIGWFGVVMIPTLLTATSVFIIAFVAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFLLGVLCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVLGIWLTAMSVSTMAFNLNGFNFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASQESLPLALVAPSING 362          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1369.2806.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PSBA_ECTSI3.730e-25495.00Photosystem II protein D1 n=1129 Tax=Eukaryota Tax... [more]
A0A1N7TJI8_9PHAE1.520e-25393.89Photosystem II protein D1 n=412 Tax=Eukaryota TaxI... [more]
PSBA_PHATC1.020e-25192.50Photosystem II protein D1 n=590 Tax=root TaxID=1 R... [more]
A0A023JEK8_9STRA1.330e-24790.56Photosystem II protein D1 n=4 Tax=Bacillariophyta ... [more]
A0A7S2RD40_9STRA5.990e-24790.83Photosystem II protein D1 n=1 Tax=Rhizochromulina ... [more]
A0A451FLR3_9STRA7.080e-24389.39Photosystem II protein D1 n=179 Tax=Eukaryota TaxI... [more]
A0A3G2R049_9STRA1.680e-23988.33Photosystem II protein D1 n=23 Tax=cellular organi... [more]
PSBA_CYAM11.860e-23887.99Photosystem II protein D1 n=18 Tax=Eukaryota TaxID... [more]
PSBA_EMIHU6.210e-23786.67Photosystem II protein D1 n=71 Tax=root TaxID=1 Re... [more]
A0A0B5W3P8_9FLOR6.690e-23788.06Photosystem II protein D1 n=23 Tax=Ceramiales TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000484Photosynthetic reaction centre, L/MPRINTSPR00256REACTNCENTREcoord: 109..137
score: 23.97
coord: 197..223
score: 35.45
IPR000484Photosynthetic reaction centre, L/MPFAMPF00124Photo_RCcoord: 28..319
e-value: 4.9E-93
score: 311.1
IPR000484Photosynthetic reaction centre, L/MPANTHERPTHR33149FAMILY NOT NAMEDcoord: 1..352
IPR000484Photosynthetic reaction centre, L/MPROSITEPS00244REACTION_CENTERcoord: 191..217
IPR005867Photosystem II protein D1TIGRFAMTIGR01151TIGR01151coord: 1..360
e-value: 1.4E-237
score: 785.1
IPR005867Photosystem II protein D1HAMAPMF_01379PSII_PsbA_D1coord: 1..347
score: 58.673
IPR036854Photosystem II protein D1/D2 superfamilyGENE3D1.20.85.10coord: 142..293
e-value: 5.2E-24
score: 86.8
IPR036854Photosystem II protein D1/D2 superfamilySUPERFAMILY81483Bacterial photosystem II reaction centre, L and M subunitscoord: 12..343
NoneNo IPR availablePANTHERPTHR33149:SF11coord: 1..352
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 29..55
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 200..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..295
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 225..269
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 296..360
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 189..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..28
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 197..219
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 30..52
NoneNo IPR availableTMHMMTMhelixcoord: 109..128
NoneNo IPR availableTMHMMTMhelixcoord: 72..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1369contigL-elsbetiae_contig1369:9347..10429 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1369.2806.1mRNA_L-elsbetiae_contig1369.2806.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1369 9347..10429 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1369.2806.1 ID=prot_L-elsbetiae_contig1369.2806.1|Name=mRNA_L-elsbetiae_contig1369.2806.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=361bp
MVATLERSESITLWERFASWITSTENRLYIGWFGCLMIPTLLTATSCYII
AFIAAPPVDIDGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAA
SVDEWLYNGGPYQLIVLHFLIGVACYMGREWELSYRLGMRPWIFVAFSAP
VAAASAVFLVYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMA
GVAGVFGGSLFSAMHGSLVTSSLIRETSELESVNYGYKFGQEEETYNIVA
AHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTSLGVSTMAFNLNGF
NFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILP
VAISAPSIVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000484Photo_RC_L/M
IPR005867PSII_D1
IPR036854Photo_II_D1/D2_sf