mRNA_L-elsbetiae_contig1023.280.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 317 bits (812), Expect = 4.710e-98 Identity = 195/272 (71.69%), Postives = 211/272 (77.57%), Query Frame = 2 Query: 377 YVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGLLGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAED-AEAENNEARVVDGSALTPDDNIEAAQG*RDARTRLTVRL 1189 YVILDYTVPGLGFVAD LTSFL+WVE+NPGLGA+AFA VY+FTTV FIPGSLLTLGAGLVFGRAL ILAFLLGRFVLQ+QAQGLFNKFKVLKAV+RAI++QGLKLVILLRLSPVVPFSAFNYVMGVT V FRDYA+GCVG +PGT AFVFIGTTASGLLGD D E XXXXXXXXX VQLIV IVGGIATVIAV+LISIY+KRALNKVL ED E E E + G+ + A G R A VR+ Sbjct: 57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLLGD-DSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMGLESGNGGMNNMEQSAQDGARPAVVEHAVRM 327
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK) HSP 1 Score: 273 bits (697), Expect = 1.640e-81 Identity = 188/282 (66.67%), Postives = 224/282 (79.43%), Query Frame = 2 Query: 269 YKTMPTKQGEAIATPPT--QQEKLTKAGLLFGLVVVVGYVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGLLGDADE----------EXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAEDAE 1078 YK TK ++ T ++ KL K GLL LV ++ YV+LDYT+P LG V ILTSFL WVE +PG G +AFA+VY+ TTV FIPGS+LTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXX +AFLLGR+VLQD AQ LFNKF VLKAVD+AIE +GL+LVILLRLSPV+PFSAFNYVMG+T V FR Y LGCVGM+PGT A+VFIGT+A+GLLGDAD+ XXXXXXXXXX V ++VL+VG ATV+AV+LI++ S+RAL +VL ++AE Sbjct: 25 YKKETTKGSGSLGGEKTGDRKNKLIKFGLLSLLVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLMKEAE 306
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.690e-73 Identity = 143/269 (53.16%), Postives = 185/269 (68.77%), Query Frame = 2 Query: 320 QQEKLTKAGLLFGLVVVVGYVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGL---------LGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAEDAEAENNEAR 1099 ++EK+ K L LV ++ YVI+DY+VP LG V +L+ FL WVE+NP G AFA VY+F TVAFIPGSLLTLGAGLVFGRAL I+AF+LGR+VLQD AQ LFNKFK+++AVD+AIE+QGLKL +LLRLSPVVPF+AFNY+MG+TA+ +DY +GC+G++PGT A+VFIG++ASG+ D ++ V LIV+IVG IATVIAV LIS Y+K+ALN++L E EN + + Sbjct: 20 KKEKIRKLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEENQDGK 288
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.270e-46 Identity = 98/232 (42.24%), Postives = 145/232 (62.50%), Query Frame = 2 Query: 431 TSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGLLGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAE---DAEAENNEARVVDGSA 1117 TSF +W+E+NP G + FA ++ +T+ F+PG LLT+GAG+ FGRAL ++AF LGR+VL +QAQ ++++L AV+ AIE G+K++ILLRLSP+VPFS FN++ G+T V RDY LG VG+VPGT AFV+IG + +G + + E +++ LIVG +A V+A++ ++IY++RAL + L E DA A+ E +GSA Sbjct: 95 TSF-EWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNE-QEAMNSGEADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELDANADKEEKAEHEGSA 324
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.100e-45 Identity = 102/254 (40.16%), Postives = 153/254 (60.24%), Query Frame = 2 Query: 326 EKLTKAGLLFGLVVVVGYVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGL--LGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAEDAEA 1081 +KL A +L G +V +VI+D T G ++ D + +FL+W+E NP G F VY+ TV F+PG +LTLGAG VF A +LAFL+ R++L++ A GL KF + +A+D+A+E +GLK++ILLRLSPV+PF+A NYV GVTAV F+DY+L M+PGT +VF+G +A L +G + + A+ + ++VG + ++AV L S Y+K+ LNK+L ++ EA Sbjct: 17 KKLVLALVLIGFIV---FVIIDSTTNG--YIKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLATIGSSTDSK----------ALTISTVVVGVVLGIVAVALSSRYAKKELNKILDQEEEA 255
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A0G4EY60_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EY60_VITBC) HSP 1 Score: 172 bits (436), Expect = 4.420e-44 Identity = 109/266 (40.98%), Postives = 159/266 (59.77%), Query Frame = 2 Query: 359 LVVVVGYVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTT---ASGLLGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAEDAEAENNEARVVDGSALTPDDNIEAA 1147 ++ ++ Y+I+D T VA+ L F +WV++NP G +A+ AVY+ TVAFIPGS+LTLGAG F A LAF GRF+ + QGL +KFKV++A+D+ ETQGLKL ILLRLSPVVPFSAFNY+MG T ++RDYA+G +G++PGTA +V+IG A G A+ Q + L VG +AT IAV +++ ++++AL ++ ++A AE ++A +G TP +++ A Sbjct: 62 IIAIIVYIIIDSTTGQR--VAEGLDIFKEWVQDNPATGILAYMAVYMVCTVAFIPGSILTLGAGFTFVCAFGNGPGMAAGIGAVLVGAFVGAQLAFFCGRFLFKSWVQGLTDKFKVMRAIDKVFETQGLKLNILLRLSPVVPFSAFNYIMGGTRTRYRDYAIGTLGIIPGTALYVYIGAIPAFAGACSGKAEGSGHWS---------QWVFLAVGLVATFIAVFIVTWFARKALREITEKEA-AEASKADGKEG-VETPGPDLDGA 314
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: W7TSR1_9STRA (SNARE associated Golgi protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSR1_9STRA) HSP 1 Score: 168 bits (426), Expect = 9.030e-43 Identity = 102/259 (39.38%), Postives = 155/259 (59.85%), Query Frame = 2 Query: 338 KAGLLFGLVVVVGYVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIET-QGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGLLGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAEDAEAENNEARVVDG 1111 + G+L +VVV + +DY+ G VA +L++FL+WV +P GA+AFAAVY + V F+PG+ LTLG G +FG+AL + AF LGR++L + AQ N++ +L+A+D ++ +GLK+V+LLRLSP+VPF+A NY+M VT+V + Y LG VGMVP A+ F+GTTA GL +A E V++ + +VG +A V AV ++S +++ L K+ ++ E E R V+G Sbjct: 51 QGGILVLWLVVVILIAVDYSPAGHRHVARVLSTFLEWVGRHPLRGAMAFAAVYALSVVFFVPGAALTLGGGFLFGQALGVGPGTVFASLAVFVGASAGAVAAFSLGRWLLHETAQSTLNRYTILRALDASLHGHRGLKIVLLLRLSPLVPFTALNYMMSVTSVSLKTYTLGLVGMVPAVVAYSFLGTTAGGLTREAGGESSVER------GVKIAMYVVGAVALVAAVGVLSRFAREELRKI-QDEGEGARGEGRDVEG 302
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A7S2A6Q3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A6Q3_TRICV) HSP 1 Score: 161 bits (408), Expect = 2.170e-40 Identity = 92/242 (38.02%), Postives = 140/242 (57.85%), Query Frame = 2 Query: 347 LLFGLVVVVGYVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGLLGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAED 1072 +L GL+V ++I+D G FV + LQW+E NP G F AVY TV F+PGSLLTLG+G VF + ++AF+LGR++L+D + L K+ V +A+D+A+E +GL+++ILLRLSP++PF+A NY+ GVT+V F+ YA ++PGT FVF+G +A L+ + V + ++VG + VIA+ L S Y+K+ LNK+L ++ Sbjct: 52 VLVGLIV---FIIVDSVTHG--FVKGAIEGLLQWIEENPIRGLFVFMAVYFVATVLFVPGSLLTLGSGFVFAESFGLGFGVLLATLAVFVGATLGALVAFILGRYLLRDWVENLTKKYNVFRAIDKALEEKGLRIMILLRLSPIIPFNALNYICGVTSVSFKHYAWANFAILPGTILFVFLGASAGSLVDSGN--------GGDTPVVTIATIVVGVVFGVIAIALTSRYAKKELNKILEQE 280
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.820e-40 Identity = 106/301 (35.22%), Postives = 166/301 (55.15%), Query Frame = 2 Query: 299 AIATPPTQQEK-LTKAGLLFGLVVV--VGYVILDY--TVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGSLLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGLLGDADEEXXXXXXXXXXXAVQLIVLIVGGIATVIAVILISIYSKRALNKVLAE------------DAEAENNEARVVDG--SALTPDDNIEA 1144 A TPPT + L K G FGL++V + YVI+D T + VAD FL W+E+NP G AF VYI ++ FIPG +LTLGAG VF AL +FL+GR++L+D L K + +A+D A++ +GL+++ILLR+SP+VPF+ FNYV GVT++ RDYA+G +G++PGT ++ +G++A L+ + V++I +++G + V+ V + Y+K+ LNK+L++ D ++ N + G S T +D++EA Sbjct: 15 ATQTPPTSRRAFLFKIG--FGLILVGFIIYVIIDLATTKNTMRIVAD----FLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLVDSSSS--------GNDSTVRIISIVLGIVFAVLGVYATTYYAKKELNKILSQRREVNAAASTEGDVDSSNGKGASTIGNDSVTTDEDDVEA 301
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Match: A0A7S3XRA4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRA4_HETAK) HSP 1 Score: 155 bits (393), Expect = 1.050e-39 Identity = 78/180 (43.33%), Postives = 118/180 (65.56%), Query Frame = 2 Query: 377 YVILDYTVPGLGFVADILTSFLQWVENNPGLGAIAFAAVYIFTTVAFIPGS--LLTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXILAFLLGRFVLQDQAQGLFNKFKVLKAVDRAIETQGLKLVILLRLSPVVPFSAFNYVMGVTAVKFRDYALGCVGMVPGTAAFVFIGTTASGL 910 Y++LDY + GLG+ + FL WV +P G AFAAVYI T+ PG+ LT+ +G++FG+A I+ F +GR +L+++AQ LFN++K+LKA+D AIE +GLKL+ LLRLSPVVP++ FNY++GVT V+ +D+ +GC+G++P TAA ++G +A+ L Sbjct: 15 YIVLDYNLEGLGYFQRAMVDFLDWVNGHPVEGIFAFAAVYILITLPGFPGAGIALTISSGVLFGQAFGEGMGILLATTSVFIGGSIGGIMCFKIGRLLLREKAQKLFNRYKLLKAIDMAIEKEGLKLIFLLRLSPVVPWATFNYLLGVTRVRTKDFVVGCLGLIPITAAQAYLGISAASL 194 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1023.280.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1023.280.1 >prot_L-elsbetiae_contig1023.280.1 ID=prot_L-elsbetiae_contig1023.280.1|Name=mRNA_L-elsbetiae_contig1023.280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=307bp MSAMGSSNASNYKTMPTKQGEAIATPPTQQEKLTKAGLLFGLVVVVGYVIback to top mRNA from alignment at L-elsbetiae_contig1023:24227..28951+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1023.280.1 ID=mRNA_L-elsbetiae_contig1023.280.1|Name=mRNA_L-elsbetiae_contig1023.280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4725bp|location=Sequence derived from alignment at L-elsbetiae_contig1023:24227..28951+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1023:24227..28951+ >mRNA_L-elsbetiae_contig1023.280.1 ID=mRNA_L-elsbetiae_contig1023.280.1|Name=mRNA_L-elsbetiae_contig1023.280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1842bp|location=Sequence derived from alignment at L-elsbetiae_contig1023:24227..28951+ (Laminarionema elsbetiae ELsaHSoW15)back to top |