mRNA_L-elsbetiae_contig13599.2734.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: D8LCL7_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCL7_ECTSI) HSP 1 Score: 184 bits (468), Expect = 2.460e-52 Identity = 187/198 (94.44%), Postives = 192/198 (96.97%), Query Frame = 1 Query: 19 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMNDISADLEDLDKIEKMVHANELRAREA 612 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKIT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGK LATLDLSCNELQDDD+RLLCVAL+RN+SLTSIDLRMND+SADLEDL+KIEKMVHANELRAREA Sbjct: 315 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKVLATLDLSCNELQDDDIRLLCVALERNSSLTSIDLRMNDVSADLEDLEKIEKMVHANELRAREA 512
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A7S2S000_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S000_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.420e-21 Identity = 135/196 (68.88%), Postives = 152/196 (77.55%), Query Frame = 1 Query: 25 NLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMN-DISADLED-LDKIEKMVHANELRAR 606 NLIDDDL+RMLMTGLI+N +IT+LDVSHNKITNHG R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S+ E +L+ VL++P L+TLDLSCN+L DV L L N +TSIDLRMN ++ D E+ LD I +MVH NE+ AR Sbjct: 147 NLIDDDLLRMLMTGLIKNDSITHLDVSHNKITNHGVRLLAKLLGGQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGNETVGALAAVLQEPECPLSTLDLSCNDLDTQDVITLESVLSENRIMTSIDLRMNPNVGEDAEEALDSINRMVHFNEIDAR 342
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A835Z8G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G8_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 2.260e-15 Identity = 107/219 (48.86%), Postives = 123/219 (56.16%), Query Frame = 1 Query: 19 QGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------SIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRN---------------ASLTSIDLRMNDISADLEDLDKIEKMVHANELRAR 606 +G L+DDDL+RML GL R +T+T+LD+SHN+I +HGAR XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX S+ RE L +LR PG L LDLS NEL DDD R L AL+ A + S+DLR N +SA LEDL+ IE VHANEL R Sbjct: 231 RGGLVDDDLLRMLAAGLARAATLTHLDLSHNRIADHGARLLARLLCGXXXXXXXXXXALTALSLADNAIRAEGARHLGRALRENDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNSLGRETAVVLGALLRSPGHGLRVLDLSSNELTDDDARTLRAALEARPAGXXXXXXXXXXXGAPIVSLDLRANRLSAGLEDLEAIEARVHANELAER 449
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A482UXY9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UXY9_9ARCH) HSP 1 Score: 68.6 bits (166), Expect = 8.220e-12 Identity = 31/36 (86.11%), Postives = 36/36 (100.00%), Query Frame = 1 Query: 28 LIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGAR 135 +IDDDL+RMLMTGLI+N+TITYLD+SHNKITNHGAR Sbjct: 1 MIDDDLLRMLMTGLIKNTTITYLDMSHNKITNHGAR 36
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: F0YNH4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNH4_AURAN) HSP 1 Score: 59.3 bits (142), Expect = 4.410e-7 Identity = 103/168 (61.31%), Postives = 124/168 (73.81%), Query Frame = 1 Query: 19 QGNLIDDDLMRMLMTGLIRNSTITYLD----VSHNKITNHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASL 510 Q NLIDDDL+RMLMTGLI+ + + D +SHNK+TNHG R XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS+ E+ ++L+ +L P +L++LDLSCN+L + D++ + +ALD N L Sbjct: 97 QSNLIDDDLLRMLMTGLIK---VLFHDFSIYLSHNKVTNHGVRLLSKLLGARSVLTNLNLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSMGSESANALANILADPCSRLSSLDLSCNDLTEQDLKHVMIALDENKVL 261
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A1W0ABG7_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0ABG7_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 7.780e-6 Identity = 125/204 (61.27%), Postives = 148/204 (72.55%), Query Frame = 1 Query: 1 LSYIMRQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIAREACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMNDISADLEDLDKIEKMVHANELRAREA 612 LS ++ NL+DDDL+RM+MTGLI+NST+T LD+S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ R+ +L +L P L LDLS N + DV L L+RN + + DLR N I + L +I +++ NE+ R A Sbjct: 227 LSSLLLPSNLLDDDLLRMIMTGLIKNSTVTTLDLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGRDTAEALCGLLFDPECPLTILDLSGNNFTESDVSALYEGLERNTKVVTFDLRQNQIPKEANVLIQIAQIIRRNEIEGRHA 430
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: J9IB95_9SPIT (Flagellar associated protein n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9IB95_9SPIT) HSP 1 Score: 54.3 bits (129), Expect = 3.710e-5 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 1 LSYIMRQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGAR 135 L Y+ GNLIDDDL+ +L+ GL+ N TI+ LD SHNKI+N GAR Sbjct: 247 LIYLSLPGNLIDDDLISILIKGLMLNKTISQLDFSHNKISNSGAR 291
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A8J8NDT2_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8NDT2_HALGN) HSP 1 Score: 53.9 bits (128), Expect = 4.970e-5 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1 Query: 1 LSYIMRQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGAR 135 L ++ GNLIDDDL+ +L+ GL+ N TI+ LD+SHNKI+N GAR Sbjct: 240 LIFLSMPGNLIDDDLISILIKGLMLNKTISQLDLSHNKISNSGAR 284
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A078A220_STYLE (Uncharacterized protein n=1 Tax=Stylonychia lemnae TaxID=5949 RepID=A0A078A220_STYLE) HSP 1 Score: 53.5 bits (127), Expect = 6.720e-5 Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 1 Query: 1 LSYIMRQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGAR 135 L Y+ GNLIDDDL+ +L+ GL+ N T++ LD SHNKI+N GAR Sbjct: 243 LIYLSLPGNLIDDDLISILIKGLMLNKTLSQLDFSHNKISNSGAR 287
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Match: A0A418B0C2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0C2_9STRA) HSP 1 Score: 52.4 bits (124), Expect = 8.870e-5 Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 376 EACSSLSMVLRKPGKKLATLDLSCNELQDDDVRLLCVALDRNASLTSIDLRMNDISADLEDLDKIEKMVHANELRAR 606 E +L + P L+ +DLS N+LQ+ DV L L++N + ++DLR N IS D L +I ++V NE+ R Sbjct: 153 ETAEALCRLFLDPDSALSVIDLSGNQLQESDVISLYEGLEKNTRVVTLDLRQNQISKDTSALTQIAQIVRRNEIEGR 229 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13599.2734.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13599.2734.1 >prot_L-elsbetiae_contig13599.2734.1 ID=prot_L-elsbetiae_contig13599.2734.1|Name=mRNA_L-elsbetiae_contig13599.2734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp MRQGNLIDDDLMRMLMTGLIRNSTITYLDVSHNKITNHGARLLSKLLGENback to top mRNA from alignment at L-elsbetiae_contig13599:407..2831+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13599.2734.1 ID=mRNA_L-elsbetiae_contig13599.2734.1|Name=mRNA_L-elsbetiae_contig13599.2734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2425bp|location=Sequence derived from alignment at L-elsbetiae_contig13599:407..2831+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13599:407..2831+ >mRNA_L-elsbetiae_contig13599.2734.1 ID=mRNA_L-elsbetiae_contig13599.2734.1|Name=mRNA_L-elsbetiae_contig13599.2734.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig13599:407..2831+ (Laminarionema elsbetiae ELsaHSoW15)back to top |