mRNA_L-elsbetiae_contig13573.2721.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: A0A6H5KT07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT07_9PHAE) HSP 1 Score: 279 bits (714), Expect = 4.410e-83 Identity = 143/192 (74.48%), Postives = 160/192 (83.33%), Query Frame = 1 Query: 4 SAGPG-RRLVRAETPSVAGEGYRSGKWLWEWQIVSCGNRASVGVCGHDVAAISAAGVPVQGSGGD----RADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVGARFEIVRRSDAAKGSDDGGGASSGGSRGLFPCVSLRVSGDAAVLLGLKKGSATITYRPPSSDKKGGG 564 SAGPG RRLV AE PSVAGEGY++GKWLWEW ++SCGNR SVGVC DVAAISAAGVP+QG+GG RADLWLYRSDG+LSHGGESTER CPGGGFDSGDV+GVELDADAGTL FLKND+YVG +F+I RRS+ D GG RGL+PCVSLRV+GDAAVLLGLK+G+ATITYR P S+KK GG Sbjct: 6538 SAGPGSRRLVVAEAPSVAGEGYQTGKWLWEWHVMSCGNRVSVGVCRRDVAAISAAGVPLQGAGGGGAGGRADLWLYRSDGNLSHGGESTERMCPGGGFDSGDVVGVELDADAGTLAFLKNDAYVGGQFKIDRRSEGDHSGDGEGG------RGLYPCVSLRVNGDAAVLLGLKQGAATITYRSPPSEKKSGG 6723
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: D8LCZ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCZ5_ECTSI) HSP 1 Score: 255 bits (651), Expect = 1.290e-74 Identity = 135/172 (78.49%), Postives = 145/172 (84.30%), Query Frame = 1 Query: 4 SAGPG-RRLVRAETPSVAGEGYRSGKWLWEWQIVSCGNRASVGVCGHDVAAISAAGVPVQGSGG----DRADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVGARFEIVRRSDAAKGSDDGGGASSGGSRGLFPCVSLRVSGDAAVLLGL 504 SA PG RRLV AE PSVAGEGY++GKWLWEW IVSCGNRASVGVC DVAAISAAGVP+QG+GG DRADLWLYRSDG+LSHGGESTER CPGGGFDSGDV+GVELDADAGTL FLKND+YVG +F+I RRS+ G D G G G RGLFPCVSLR SGDAAVLLGL Sbjct: 6021 SAEPGSRRLVVAEAPSVAGEGYQTGKWLWEWHIVSCGNRASVGVCRRDVAAISAAGVPLQGAGGGGAGDRADLWLYRSDGNLSHGGESTERMCPGGGFDSGDVVGVELDADAGTLAFLKNDAYVGGQFKIDRRSE---GDDSGDGE---GGRGLFPCVSLRASGDAAVLLGL 6186
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: A0A812VSI3_9DINO (HERC1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VSI3_9DINO) HSP 1 Score: 70.1 bits (170), Expect = 2.590e-10 Identity = 52/163 (31.90%), Postives = 74/163 (45.40%), Query Frame = 1 Query: 70 SGKWLWEWQIVSCGNRASVGVCGHDVAAISAAGVPVQGSGGDRADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVGARFEIVRRSDAAKGS----DDGGGASSGGSRGLFPCVSLRVSGDAAVLLGLKKGSATITYRPPSS 546 SGKW+WE +++S V GH V ++ G V+ G W ++S+ H G S P F GDVIGVE+D D GT+ +L N + +G + +R S DG +G+ P ++ GDA LLGLK G T+ S Sbjct: 7 SGKWMWEAKVLS--------VQGHVVVGMATRGAVVRNHLGCERQSWGFKSNRECFHKGSSKPYGKP---FSGGDVIGVEVDMDNGTIEWLVNGTGLGIAYTDLRAQAMEHSSVCHIPDG--------KGVVPGLTTYAQGDAVKLLGLKSGHGVRTWSEEDS 150
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: A0A1W0A8K7_9STRA (HECT E3 ubiquitin ligase (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8K7_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 3.170e-6 Identity = 45/155 (29.03%), Postives = 66/155 (42.58%), Query Frame = 1 Query: 73 GKWLWEWQIVSCGNRASV--GVCGHDVAAISAAGVPVQGSGGDRADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVGARFEIVRRSDAAKGSDDGGGASSGGSRGLFPCVSLRVSGDAAVLLGLKKGSATITY 531 G++LWE++I + + G+ H+V G G W + + G H S G F GDV+G+EL+ DAGTL +N+ +G F + G G GL PCVSL + + GLK G+ +I Y Sbjct: 3646 GQYLWEFEITNLQTSDGIRLGIATHNVDTSILLGNDSYG--------WGFCATGKTYHNNSSNRFTSTG--FTQGDVVGMELNMDAGTLVIYRNNVLLGTAFSNLHLELPMDAFVTGNG-------GLIPCVSLYRPQSSVYIRGLKHGNGSIVY 3783
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: A0A6J7WKN4_9CAUD (SPRY domain containing protein n=1 Tax=uncultured Caudovirales phage TaxID=2100421 RepID=A0A6J7WKN4_9CAUD) HSP 1 Score: 55.5 bits (132), Expect = 2.190e-5 Identity = 49/186 (26.34%), Postives = 78/186 (41.94%), Query Frame = 1 Query: 1 VSAGPGRRLV--RAETPSVAGEGYRSGKWLWEWQIVSCGNRASVGVCGHDVAAISAAGVPVQGSGGDRADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVGARFEIVRRSDAAKGSDDGGGASSGGSRGLFPCVSLRVSGDAAVLLGLKKGSATITYRPPSSDK 552 VSA G V A++ + G SGKW WE + + + + + +++ + GGD Y S+G+ + G +T G +GDV+G+ DADAGTLTF KN++ G + + S FPC +G+A + + G + Y PP+ K Sbjct: 282 VSASSGNLTVVNTADSKILGTIGMSSGKWYWEATVQTATDIVGIALGNSTLSSFT---------GGDANSWGYYFSNGNKYNSGSATAY---GASCATGDVVGIAFDADAGTLTFYKNNTSQGTAYSSLT------------------SGPYFPCAG---NGNANTVY-INFGQRSFAYTPPTGFK 433
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: A0A2E7TNJ0_9ACTN (B30.2/SPRY domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E7TNJ0_9ACTN) HSP 1 Score: 55.1 bits (131), Expect = 3.060e-5 Identity = 35/103 (33.98%), Postives = 52/103 (50.49%), Query Frame = 1 Query: 61 GYRSGKWLWEWQIVSCGNRAS--VGVCGHDVAAISAAGVPVQGSGGDRADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVG 363 G SGKW WE +++ G A+ G+C + S+ P+ D + Y +DG + G + G + +GD++GV LD DAGTLTF KN + G Sbjct: 782 GLSSGKWYWEIYMITIGAAANCRTGICKTNTYGTSSGTGPI-----DMGVAYTYDADGQKTVPGST---GAYGATYAAGDIVGVALDMDAGTLTFYKNGATQG 876
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Match: A0A3E0N2T2_9PROT (B30.2/SPRY domain-containing protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A3E0N2T2_9PROT) HSP 1 Score: 55.1 bits (131), Expect = 3.130e-5 Identity = 46/119 (38.66%), Postives = 57/119 (47.90%), Query Frame = 1 Query: 16 GRRLVRAETPSVAGEGYRSGKWLWEWQIVSCGNRASVGVCGHDVAAISAAGVPVQGSGGDRADLWLYRSDGSLSHGGESTERACPGGGFDSGDVIGVELDADAGTLTFLKNDSYVGARF 372 G L A T ++ G SGK+ WE A+ G DV I +AG V G G AD + Y +DG+ + T G + SGDVIGV LD DAGTL F KN + G F Sbjct: 499 GSDLQAAVTGTI---GVSSGKYYWE---------ATAG-SNKDVIGIWSAGSHVTGYPGKTADSYGYFADGNKLNSETGTSY---GATYASGDVIGVALDLDAGTLVFYKNGASQGTAF 601 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13573.2721.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13573.2721.1 >prot_L-elsbetiae_contig13573.2721.1 ID=prot_L-elsbetiae_contig13573.2721.1|Name=mRNA_L-elsbetiae_contig13573.2721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=220bp VSAGPGRRLVRAETPSVAGEGYRSGKWLWEWQIVSCGNRASVGVCGHDVAback to top mRNA from alignment at L-elsbetiae_contig13573:1961..2621+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13573.2721.1 ID=mRNA_L-elsbetiae_contig13573.2721.1|Name=mRNA_L-elsbetiae_contig13573.2721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=661bp|location=Sequence derived from alignment at L-elsbetiae_contig13573:1961..2621+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13573:1961..2621+ >mRNA_L-elsbetiae_contig13573.2721.1 ID=mRNA_L-elsbetiae_contig13573.2721.1|Name=mRNA_L-elsbetiae_contig13573.2721.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1320bp|location=Sequence derived from alignment at L-elsbetiae_contig13573:1961..2621+ (Laminarionema elsbetiae ELsaHSoW15)back to top |