mRNA_L-elsbetiae_contig13549.2710.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13549.2710.1
Unique NamemRNA_L-elsbetiae_contig13549.2710.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: D7G161_ECTSI (Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G161_ECTSI)

HSP 1 Score: 287 bits (734), Expect = 1.620e-89
Identity = 159/268 (59.33%), Postives = 185/268 (69.03%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGRDGPGAAPRGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCC----RLEKTRGARRAPRP--ETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAARLSWWRLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQLRQLGVRLFPFGR 786
            FQWALSQAAV VEPDLVKITPYYEP+E A+WFQR SV+V+D T+VLGV+AWCKGA  R   G    G  P   +CAT  G LVLLNSGLF+VDHVHFQYNGFLLGLLLLS+GLIRQG+VL GGATFA LL+LKHLFL+LAPLYFV+LLR +CC     +L K  G     R   E++  E     +                E    + + +   ARLSW RLA LG  VL VF + +GP CVS GWT++AC +QL QLGVRLFPFGR
Sbjct:   61 FQWALSQAAVHVEPDLVKITPYYEPSEVAVWFQRVSVMVVDVTMVLGVVAWCKGARMRQKSGGVHSGTVPQDVACATCVGPLVLLNSGLFLVDHVHFQYNGFLLGLLLLSMGLIRQGRVLSGGATFAGLLMLKHLFLALAPLYFVYLLRSYCCGASAQQLSKGVGGSGDVRRGGESSVGEASQPPERGDRKDLQRAVPSVSHEQVQAVSREDAPLARLSWKRLASLGSAVLFVFGSVLGPLCVSDGWTKDACLKQLGQLGVRLFPFGR 328          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A835Z7Q6_9STRA (Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q6_9STRA)

HSP 1 Score: 129 bits (323), Expect = 4.120e-30
Identity = 100/263 (38.02%), Postives = 135/263 (51.33%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGRDGPGAAPRGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCCRLEKTRGARRAPRPETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAARLSWWRLARLGGVVLVVFLAAVGPQCVSGGWTREA-CSRQLRQLGVRLFPFGR 786
            F+ A++     V+P++V++      +E     Q+ SV++ D TLVLG LA C     R   G A  G     A  A  + VLV LN GL + DH+HFQYNG LLG+LLLSLGL+ QG+ +  G  FA LL++KHL+  LAPLYFV+LL+G+C    +    AR      TA   +         +               + LQ           RL  LGG V+ +F  ++G  C  GG    A C +Q+RQL  RLFPFGR
Sbjct:   29 FERAVALVGARVDPNMVRLDSLDYASECTRAVQKGSVMLGDLTLVLG-LAACFWQHIR---GKASIGVLSADAGAAQRSIVLVTLNGGLLLADHMHFQYNGMLLGVLLLSLGLMIQGRQVASGLVFAALLMMKHLYACLAPLYFVYLLKGYCLGAHDAA--ARNVTVGVTAAVTDAT-------ARTGTMPAVRSKRPVLRFLQ-----------RLMLLGGGVVSIFAVSLGSICWEGGPLSGAQCLQQMRQLASRLFPFGR 267          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A835ST92_CHLIN (Alpha-1,3-glucosyltransferase n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835ST92_CHLIN)

HSP 1 Score: 127 bits (319), Expect = 9.520e-30
Identity = 112/291 (38.49%), Postives = 143/291 (49.14%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVL-----------AWCKGASGRDGPGAAPRGAPPL-----------RASCATLTGV-------LVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCCRLEKTRGARRAPRPETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAARLSWWRLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQLRQLGVRLFPFGR 786
            F+WALSQAA + EP ++ ++     +  A+ FQR SV+VMD  L+L              AW    +    PG++ RG PP            R+S A L G        L+ LN+GL +VDH+HFQYNG ++G+LLLSL   R G+ L  G  FA LL +KHLFL  AP YFV+LLR +C     +T G+                        XXXXXXXXXX       QG G  A     RLA LG  V+ VF  + GP    G         Q+ Q+  RLFPFGR
Sbjct:   72 FEWALSQAAAVAEPAMLAVSNLEYDSAAAVAFQRGSVIVMDLVLLLAAFWLARDVAATGAAWNGVGASFGAPGSSSRGTPPRSASFSSLPADSRSSAAALAGRRGVALFGLLALNAGLLLVDHIHFQYNGVMMGVLLLSLAAARTGRHLLSGVLFAVLLNIKHLFLYAAPAYFVYLLRHYCF----ETTGSXXXX--------------------XXXXXXXXXXXXXXXXGQGLGPRAARGLTRLAALGVAVVAVFGVSFGPFVALG---------QIPQVLSRLFPFGR 329          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A835T181_9CHLO (Alpha-1,3-glucosyltransferase n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T181_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 4.870e-27
Identity = 114/299 (38.13%), Postives = 140/299 (46.82%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCK-----------GASGRDGP---GAAPRGAPPL-----------RASCATLTGV-------LVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCCRLEKTRGARRAPRPETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAARLSW-----WRLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQLRQLGVRLFPFGR 786
            F+WALSQAA  VEP ++ +      +   + FQR SVVV D  L+L      +           G  G  GP   G+  R  PP            R+S A L G        L+ LN+GL +VDH+HFQYNG +LG+LLLSL   R G+ L  G  FA LL +KHLFL  AP YFV+LLR +C                          F+   +S XXXXXXXXXX        G G A R  W      RL  LG  V+ VF A+ GP    G         Q+ Q+  RLFPFGR
Sbjct:   72 FEWALSQAAAAVEPAMLVVANLGHDSAATVAFQRGSVVVTDLMLLLAAYWLARDVAALSMGRNSGGGGFSGPANGGSGVRAPPPRSASFSGLPADSRSSAAALAGRRGVALFGLLALNAGLLLVDHIHFQYNGIMLGVLLLSLAAARTGRHLLSGFLFAVLLNMKHLFLHAAPAYFVYLLRHYC--------------------------FETTADSSXXXXXXXXXX--------GSGNAGRGIWVTHGLTRLTLLGAAVVAVFGASFGPFLALG---------QIPQVLSRLFPFGR 327          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A0G4ENQ5_VITBC (Alpha-1,3-glucosyltransferase n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ENQ5_VITBC)

HSP 1 Score: 119 bits (297), Expect = 1.070e-26
Identity = 93/291 (31.96%), Postives = 136/291 (46.74%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGR----DGPGA-------APRGAPPLRASCATLTGV------------------LVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCCRLEKTRGARRAPRPETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAARLSWWRLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQLRQLGVRLFPFGR 786
            F+W L+ AA  ++  +++++     ++  +WFQR SV+  DA L+ GV++     +GR     G G+       AP        + +T+ G+                    +LN GL +VDHVHFQYNG +LG+LLLS+  I +G+VL G A FA LL++KH+FL +AP+YFV LLR +C  +L                         PR+              A      +  A  + +W L   G VVL V  AA+ P  ++G         QL  L  RLFPFGR
Sbjct:   79 FEWILAGAAQFIDAKMLEVSNLDYASDGTVWFQRLSVMATDALLLWGVISLVDVLTGRAEDEHGTGSGGSSACVAPADGDQSSDTRSTIDGIDDKKLRRDRNYAVIGGLISCVLNPGLLIVDHVHFQYNGMMLGVLLLSMAQIMRGRVLVGSALFALLLIMKHIFLYIAPVYFVFLLRTYCLMQLS------------------------PRDIMACSCGRDDSMRVARSRKDTDRRAFMVRFWSL---GAVVLAVVAAALLPILLTG---------QLGALIGRLFPFGR 333          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A835Y1H5_9CHLO (Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol alpha-1,3-glucosyltransferase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y1H5_9CHLO)

HSP 1 Score: 119 bits (297), Expect = 1.280e-26
Identity = 110/266 (41.35%), Postives = 133/266 (50.00%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGRDGPGAAP----RGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCCRLEKTRGARRAPRPETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAARLSWWRLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQLRQLGVRLFPFGR 786
            F+WAL+Q A  VEP +V +T     ++ A+ FQR SV+  DA L+L      +G       GAAP     GA    A C     +L+   +GL +VDHVHFQYNG L+G+LLLSL   R G  L  G  FA LL+LKHLF    P+YFV LLR +C                           +E  E XXXXXXXXXXX        G G   R    RLA LG  V+ VF AA+GP    G         Q +QL  RLFPFGR
Sbjct:   72 FEWALAQLAARVEPGMVVLTNLGYDSDAAVLFQRFSVMATDAVLLLAAYLLARGV------GAAPFSPRAGASAASAGCCLF--LLLATCAGLLLVDHVHFQYNGVLMGVLLLSLAAGRSGAPLLSGVLFAALLMLKHLFAYAGPVYFVLLLRHYCFG----------------------GEGEEAAEXXXXXXXXXXXXXXXXXXXXGAGWFGR-GLVRLAVLGCGVVAVFAAALGPFLALG---------QGKQLLSRLFPFGR 297          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: W7UBL8_9STRA (Alpha-1,3-glucosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBL8_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.780e-26
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 1
Query:    1 FQWALSQ--AAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGRDGPGAAPRGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHC 456
            FQW L+Q  AA+  +P++++I+     ++  + FQR SV V D  L++G+L W +          A  G+P    + A +T    L ++GL MVDH+HFQYNG LLG+L LS+  +R+G +L G   FA LL+ KHLFLSLAP+YFV+LL  +C
Sbjct:   68 FQWVLAQTGAALNWDPEMLRISAAPYASDPTVLFQRLSVAVTDVLLLVGILVWVQTIP-------AETGSPSRIGTLAMMT----LASAGLLMVDHMHFQYNGMLLGILFLSMAALRKGWILAGAGLFASLLMFKHLFLSLAPVYFVYLLSSYC 210          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A182FQD7_ANOAL (Alpha-1,3-glucosyltransferase n=7 Tax=Nyssorhynchus TaxID=44543 RepID=A0A182FQD7_ANOAL)

HSP 1 Score: 117 bits (292), Expect = 2.350e-26
Identity = 68/152 (44.74%), Postives = 93/152 (61.18%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGRDGPGAAPRGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHC 456
            F+WALSQ A   +P ++ +      +++ I FQR SV+VMD    LGV   C GA    G   + R           + G L+L N+GL MVDH+HFQYNGFL G+LLLS+G + +G+ L   A FA LL LKH+F+ +AP+Y V+LLR +C
Sbjct:   62 FEWALSQVAKSFDPRMLDVKNLNYASDQTILFQRFSVIVMDVIYALGVRR-CLGALTAGGHANSSRS--------QLIGGALLLGNAGLLMVDHIHFQYNGFLFGVLLLSIGALLEGRPLQSAALFAVLLNLKHIFIYVAPVYVVYLLRFYC 204          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A2T6IMI6_TOXGO (Alpha-1,3-glucosyltransferase n=1 Tax=Toxoplasma gondii TgCATBr9 TaxID=943120 RepID=A0A2T6IMI6_TOXGO)

HSP 1 Score: 115 bits (289), Expect = 3.810e-26
Identity = 91/288 (31.60%), Postives = 137/288 (47.57%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASG----RDGPGAAPRGAPPLR----------------ASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHCCCRLEKTRGARRAPRPETATAEEENNFQEPRESXXXXXXXXXXXEAAAQLLQGEGCAAR----LSWW--RLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQLRQLGVRLFPFGR 786
            F++ LS AA  V+P ++++      +   +WFQR +V++ +  LVLGV+  C+ A      R+      R +   R                   +++  +LVL N+GL +VDH+HFQYNGFLLG+LLLS+  ++ G+   G   F C L+LKH+FL +AP+YFV LL                 PR     +EE  +  E R+                +L Q  G A      LS W  R+ RLG +++   LA + P   +G         Q++ +  RLFPFGR
Sbjct:  115 FEFLLSLAARFVDPAMLQVENENYASPACVWFQRLTVILTELVLVLGVIRMCQVAETLQLQRERRARGSRSSEEARRGGDSEDERKYREGDGGGWSSVALLLVLFNAGLLIVDHIHFQYNGFLLGVLLLSIADVQTGRFYRGSVLFTCALLLKHIFLYVAPVYFVFLLSWL-------------RPRELDPGSEETESPSEGRKKEGRRDCRSVSRRPFHRLNQRAGPAVAHSSGLSLWTRRVLRLGFLLVAFVLAVLAPFIATG---------QMKAMSGRLFPFGR 380          
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Match: A0A093YUS7_9PEZI (Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-3775 TaxID=1420901 RepID=A0A093YUS7_9PEZI)

HSP 1 Score: 109 bits (272), Expect = 3.040e-25
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 1
Query:    1 FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLAWCKGASGRDGPGAAPRGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYNGFLLGLLLLSLGLIRQ-GKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRGHC 456
            F+W LSQAA LV+P++VK+      + + ++FQR SV++ +  LV  +  + +       P +  R         A +  + +L + GL ++DH+HFQYNGFL GLL+LSL L R+   +L  G  FA LL+ KH++L LAP YFV+LLR +C
Sbjct:   25 FEWVLSQAAQLVDPEMVKVYNLNYESWQTVYFQRASVILTELVLVYALHLYVE-----TSPASTKR--------AARVAALSILFSPGLLIIDHIHFQYNGFLYGLLILSLVLARKKSTLLLSGILFAVLLMFKHIYLYLAPAYFVYLLRAYC 164          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13549.2710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G161_ECTSI1.620e-8959.33Alpha-1,3-glucosyltransferase n=2 Tax=Ectocarpus T... [more]
A0A835Z7Q6_9STRA4.120e-3038.02Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol a... [more]
A0A835ST92_CHLIN9.520e-3038.49Alpha-1,3-glucosyltransferase n=1 Tax=Chlamydomona... [more]
A0A835T181_9CHLO4.870e-2738.13Alpha-1,3-glucosyltransferase n=1 Tax=Chlamydomona... [more]
A0A0G4ENQ5_VITBC1.070e-2631.96Alpha-1,3-glucosyltransferase n=3 Tax=Vitrella bra... [more]
A0A835Y1H5_9CHLO1.280e-2641.35Dolichyl-P-Glc:Glc(1)Man(9)GlcNAc(2)-PP-dolichol a... [more]
W7UBL8_9STRA1.780e-2643.51Alpha-1,3-glucosyltransferase n=2 Tax=Monodopsidac... [more]
A0A182FQD7_ANOAL2.350e-2644.74Alpha-1,3-glucosyltransferase n=7 Tax=Nyssorhynchu... [more]
A0A2T6IMI6_TOXGO3.810e-2631.60Alpha-1,3-glucosyltransferase n=1 Tax=Toxoplasma g... [more]
A0A093YUS7_9PEZI3.040e-2540.52Alpha-1,3-glucosyltransferase (Fragment) n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13549contigL-elsbetiae_contig13549:829..4869 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.8
Seed ortholog evalue6.3e-76
Seed eggNOG ortholog2880.D7G161
Preferred nameALG8
KEGG koko:K03849
KEGG ReactionR06263
KEGG Pathwayko00510,ko01100,map00510,map01100
KEGG ModuleM00055
Hectar predicted targeting categoryother localisation
GOsGO:0000030,GO:0000033,GO:0000902,GO:0000904,GO:0001703,GO:0002064,GO:0003381,GO:0003382,GO:0003383,GO:0003384,GO:0003674,GO:0003824,GO:0004583,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0006928,GO:0007275,GO:0007369,GO:0007377,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009653,GO:0009790,GO:0009888,GO:0009987,GO:0010004,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0030029,GO:0030048,GO:0030154,GO:0030855,GO:0031224,GO:0031984,GO:0032501,GO:0032502,GO:0032989,GO:0034645,GO:0036211,GO:0042175,GO:0042281,GO:0042283,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0046527,GO:0048468,GO:0048598,GO:0048856,GO:0048869,GO:0060429,GO:0070085,GO:0070252,GO:0071704,GO:0071840,GO:0097502,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity
EggNOG OGsKOG2576@1,KOG2576@2759
EC2.4.1.265
COG Functional cat.M
CAZyGT57
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Exons6
Model size789
Cds size789
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13549.2710.1prot_L-elsbetiae_contig13549.2710.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13549 829..4869 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815522.712142-CDS-L-elsbetiae_contig13549:828..10291622815522.712142-CDS-L-elsbetiae_contig13549:828..1029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 829..1029 -
1691682939.4137137-CDS-L-elsbetiae_contig13549:828..10291691682939.4137137-CDS-L-elsbetiae_contig13549:828..1029Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 829..1029 -
1622815522.722381-CDS-L-elsbetiae_contig13549:1173..14131622815522.722381-CDS-L-elsbetiae_contig13549:1173..1413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 1174..1413 -
1691682939.4264607-CDS-L-elsbetiae_contig13549:1173..14131691682939.4264607-CDS-L-elsbetiae_contig13549:1173..1413Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 1174..1413 -
1622815522.7524555-CDS-L-elsbetiae_contig13549:2450..25841622815522.7524555-CDS-L-elsbetiae_contig13549:2450..2584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 2451..2584 -
1691682939.4363945-CDS-L-elsbetiae_contig13549:2450..25841691682939.4363945-CDS-L-elsbetiae_contig13549:2450..2584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 2451..2584 -
1622815522.767668-CDS-L-elsbetiae_contig13549:3190..32161622815522.767668-CDS-L-elsbetiae_contig13549:3190..3216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 3191..3216 -
1691682939.446324-CDS-L-elsbetiae_contig13549:3190..32161691682939.446324-CDS-L-elsbetiae_contig13549:3190..3216Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 3191..3216 -
1622815522.7803957-CDS-L-elsbetiae_contig13549:3353..34421622815522.7803957-CDS-L-elsbetiae_contig13549:3353..3442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 3354..3442 -
1691682939.4580045-CDS-L-elsbetiae_contig13549:3353..34421691682939.4580045-CDS-L-elsbetiae_contig13549:3353..3442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 3354..3442 -
1622815522.7935364-CDS-L-elsbetiae_contig13549:4770..48691622815522.7935364-CDS-L-elsbetiae_contig13549:4770..4869Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 4771..4869 -
1691682939.474867-CDS-L-elsbetiae_contig13549:4770..48691691682939.474867-CDS-L-elsbetiae_contig13549:4770..4869Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13549 4771..4869 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13549.2710.1

>prot_L-elsbetiae_contig13549.2710.1 ID=prot_L-elsbetiae_contig13549.2710.1|Name=mRNA_L-elsbetiae_contig13549.2710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=263bp
FQWALSQAAVLVEPDLVKITPYYEPTERAIWFQRTSVVVMDATLVLGVLA
WCKGASGRDGPGAAPRGAPPLRASCATLTGVLVLLNSGLFMVDHVHFQYN
GFLLGLLLLSLGLIRQGKVLPGGATFACLLVLKHLFLSLAPLYFVHLLRG
HCCCRLEKTRGARRAPRPETATAEEENNFQEPRESGGGSPREGGGGEAAA
QLLQGEGCAARLSWWRLARLGGVVLVVFLAAVGPQCVSGGWTREACSRQL
RQLGVRLFPFGR*
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mRNA from alignment at L-elsbetiae_contig13549:829..4869-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13549.2710.1 ID=mRNA_L-elsbetiae_contig13549.2710.1|Name=mRNA_L-elsbetiae_contig13549.2710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4041bp|location=Sequence derived from alignment at L-elsbetiae_contig13549:829..4869- (Laminarionema elsbetiae ELsaHSoW15)
TTTCAGTGGGCACTGTCCCAGGCGGCCGTTCTCGTGGAGCCGGATCTGGT CAAGATAACCCCCTACTACGAGCCTACCGAGAGAGCCATTTGGTTCCAGG TGAGAGAGCGCCTCTTTTTTTGTTTGGTTATATCACATATGAGGAGGGGC CCCCCCCCCCCCCCTCCCTCCTGTGTGACCCCGCTCGGGTCGTCTAGCCA GTTGTAGTGGACGAAGGGGGCCAGTGGGGCAGACGACGAATAAACATGCC AATAATGGGGAAGAAAGAACGAAAATGTACAAACCGTCCCGATCTCTGCC CTCAGTACCTTCCTCTGCCCGTTCACTCATCGCCCAAACGCATGGCGCAG TCGATCCCGCAGTCACAGCCAAACTCTACTACTATAAAAAGGGTACTTTT CGGTTAGGGTTGGGGTTATAAGTAGGGTTTTTGGCGATCGGTGACCGATG GTCAATTGACCGATGCTCGATGATCGATGATCGATGATCGAGTGCTCTTC GCACACATGGACGAACGACAACATTTTTTTATGTAGAAAGACGCATTCGG CGAGGCATTCGGCGAGGCATTCGGCGAGGCGCGCGCCGGCCGTCCTAATC GGCCAAGCATTCGAGCCATGTGCTTCATCTTGGCCTTCCTGCTTCGCCCG TATTTAGAAGTTTTGTTGACTTTATTAAATTTTCAAGCACTCTATATTCT GAAAAATGCTGAGGCTTAGGACCGTTATATGAGGTTTTATGGAAAGGAAT TGGTCGTATCTCTTGGGTTTCTATTATTAGAAGTACAAAGAGAATAAGAT TAAGAATGCAATTAGAATTGCATTCTCCGTTACGGGGGGGGGGGGGGGGG CGCGCGGCGGTTGGGAATGAACTCTGGGTCGTGGCTGATTTGCCAGAAGA CCGTGCAAGGCAGTAGCAGGAGCAGGAGCAGGTGAAGACTCCAATACCGA TCTGACGACGGAATTTCGTGCGCGCCGAAGGAGCCCCGCAGATGGGTATT TATTCTTGCGGTGGCTCGATCGCTCGCGTGAACGCTGCGTGTACATAAAA AATGTACCAAAAGCAGCAGCACGAGAAAGCGGACCCCCCCCCCCGCCCCC CCAGCAAGACGCTGGCTGCACGCTTGGCACGGCGGCGGTGTTCTAGGCTT GATAGCGATGGCCGCTCTCCCCAGACGGCGTACAGATGTGTACCTGATGG CGTGCAGTAGAGATAAGGGGTGCTACTTTATGTGTGTATTAAAAAATTGC GGCGGTGCTTTTGTCGACCAACTCAAACCGAGATTCATTTCCATCGCAAA TCATCTCTCATCTAAGTCGTTTTTTGCTGCCTTGCGTTTGCGTCCTTCGC CCCCCCCCCACCCCCCCCGCGCACGCGCCCCCAACCCTCTCGTGGTCCGA CCCTTATCTTATTCCCAACACCCGAAGCGAACATCTGTTGTCGTCATGGA CGCGACCTTGGTGCTCGGGGTGCTCGCGTGGTGCAAGGGTGCCAGCGGAC GGGACGGCCCCGGTGCGTGCTCTAGCCCCCCCCCCCCCCCCCCCCCCCCC CCCCGCACGAAACGGTAAGGCGAAAATAACGTAGCGCAACATATCACCCT CTATCCCNNNNNNNNNNCACCCTCTTGTCCCTCGCGGTGTCCCTGTCCTC TAGGGCGCCCCGTGGCGCGCCCCCTTTACGTCCTTCTCCCCCCCCCCCCC CCCCCCGCGCAAGGCATGTACCTACGGGGTACATGAACGTACCCTTCTCT TGAGTTGCCCCTCCCCTCCCCTCCCCTCCCTGAGGCAGTAGTAGTCTACG CAGGGTTTTCGCCTTCAGCTAACACATGAGATAAACTACATGCGGAAGCC GGGAAAGGGGGTTCCGTTGTTGGGGTTAGGGCTAGGGTTATAGGGTTATT TTCCTAGATAAACTTAATTTCCGGCTCAGGCGGCCCCCCTGAGGGGGAAA TGAGGTTCGACATGAACAAATTTCACAGCAAGTTTTTGTCTCCATAGTAG TGAAGAAAACAAAGTTCTGGTTATTACTATGCGGTGCGCCAACGCTGTGG AAGGGTCTCCCTCTCTGAGCGCCCTGGTCCTCTAGCTCCTCCGTCCGTGT ACAGAGCTCGCCTGGTCGCTTGTCCTTTGTCTCCTTAGTCCGGATACCGA GCTTGCCTGGTTGCTTGCCTGGTCGCTTCGTCTGTCTGCTGCGGGTTTGT TTATTTGGGGAGGGGGGGTGTCATTCAACTTAAATATGCACGTGTGTGTG TTGTGTTCGTCCCCTTTTGGGCGGCTTTCGTTCAGGTGCATCATGCGCCA CCCTCACGGGCGTGCTCGTCCTGCTCAACTCCGGGCTGTTCATGGTGGAC CACGTCCACTTCCAGTACAACGGGTTCCTGCTCGGGTTGCTGCTGCTGTC CCTGGGGCTCATCAGGCAGGTGAGAAGTTTGGACAGACTTTGGAGCCAGC CAGCCTACACAATCAGTTTGTTTTTCTTTTTCCCATTATTGGCTTATTTT TCGTCTGCCCCACTGGCCCCCTCCACTGCGACTTTGTAGCTAGACGACCC ACACCGGGGTGTCTGCCTGTGATAATTTTATCGCGAGCAGGGTTCAGCAA TTGCAGCCCGATGAGTCTGATCGACGTGAAAAACACACAAAATAGGTGAG GATTTGGCAGACCGGCCTCATCGGCTGGCCCCGGCAAGTTTGGCCGATGA CGCGCACTGCTTGCTGCTGTCTGCCTCAACCGCGTCGCGGTGCAAGTGTT GCTGTGGTTGTTTTCTCACATTCTGCAGCTCTCTGTCTAGTCCAAAAACA TCCATGGGGGCCCCCGTGGTCATAAAAGCAGGACACGCTCGACGCGCCGC TGGAGAACAAATGAAACAAATTCTCGAAGGGGTTTGTTTGCCGCGTGTGT GAGTTCGCGGCTGGGGTGGGTTGGGATGGGGTGGGGTGGGGGTGGGCTGG AATGTATGCATACCCCCTGCTGACAGAGAGCCCCTGCACTGCTGGCAGAA GAGGCGCCCCATTCACGCACGTGCGCATTGAAACGTTTGCGCCTCCGTCC CTACCTTGCCTCCTTTTTGCCGTTGTTTGCTTGAGCCGGCCAATGCCTGT GCCTCGCACAGGCGTTTCGTCGTCTCTGCCTTTCTTCCGTTTTGCTTCGT GCCTTGGGGGCCACAAATCCCCCCCCCCCCCCACACACACACACCGGCGT TTTAAGACCCCCAAACTGCCCCTCCGTATCCCGCTCCTCTTCTTCATTTG CAGCCCGCACCAAAACGCGTCAAAATGACTTGAACCCCCCCCCCCCCCCG TGCTGGAGACCTCCAACACCCACACCTCCGTATCCCACACCTCCGCATCC CGCCCCCTCTCCTTGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCC GTTGTCTCGCACGTGGCCGGGCCGGCCGTCTTCGTGCCGCGGCCGGCCGG GCCCAGGGCAAGGTGCTGCCGGGGGGGGCGACGTTCGCGTGCCTGCTGGT GCTCAAGCACCTCTTCCTGTCCCTGGCGCCGCTGTACTTCGTGCACCTCC TGAGGGGCCACTGCTGCTGCCGCCTCGAGAAGACGAGGGGAGCGCGCCGC GCCCCGCGACCGGAGACGGCGACGGCGGAGGAAGAAAATAATTTCCAGGA ACCCCGCGAAAGCGGCGGCGGATCCCCCCGCGAGGGCGGCGGCGGGGTGG ACGGGGGCGGGGGCGGGGACGGGGACAGCAAAGGTGGGTTTTCTCGGGAG TCTTCTGCCGCCCGCGGGGCTCGCCCCGATCGCCGGGAGGGGCCACCCTC GGGTTCCCCTCCGCGGAGCCGTCGAGGGGGGCCCACCGAGGAGGCGGCGG CGCAGCTGCTGCAGGGGGAGGGGTGCGCGGCGCGGCTGTCGTGGTGGCGG CTGGCCCGTCTCGGCGGCGTCGTTCTGGTCGTGTTCCTGGCGGCGGTGGG GCCGCAGTGCGTCTCCGGTGGCTGGACGCGGGAGGCGTGCTCGAGGCAGC TGAGGCAGCTTGGGGTCAGGTTGTTCCCGTTCGGAAGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13549:829..4869-

>mRNA_L-elsbetiae_contig13549.2710.1 ID=mRNA_L-elsbetiae_contig13549.2710.1|Name=mRNA_L-elsbetiae_contig13549.2710.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1578bp|location=Sequence derived from alignment at L-elsbetiae_contig13549:829..4869- (Laminarionema elsbetiae ELsaHSoW15)
TTTCAGTGGGCACTGTCCCAGGCGGCCGTTCTCGTGGAGCCGGATCTGGT
CAAGATAACCCCCTACTACGAGCCTACCGAGAGAGCCATTTGGTTCCAGT
TTCAGTGGGCACTGTCCCAGGCGGCCGTTCTCGTGGAGCCGGATCTGGTC
AAGATAACCCCCTACTACGAGCCTACCGAGAGAGCCATTTGGTTCCAGCG
AACATCTGTTGTCGTCATGGACGCGACCTTGGTGCTCGGGGTGCTCGCGT
GGTGCAAGGGTGCCAGCGGACGGGACGGCCCCGGTGCCGAACATCTGTTG
TCGTCATGGACGCGACCTTGGTGCTCGGGGTGCTCGCGTGGTGCAAGGGT
GCCAGCGGACGGGACGGCCCCGGTGCGGCGCCCCGTGGCGCGCCCCCTTT
ACGGCGCCCCGTGGCGCGCCCCCTTTACGTGCATCATGCGCCACCCTCAC
GGGCGTGCTCGTCCTGCTCAACTCCGGGCTGTTCATGGTGGACCACGTCC
ACTTCCAGTACAACGGGTTCCTGCTCGGGTTGCTGCTGCTGTCCCTGGGG
CTCATCAGGCAGGTGCATCATGCGCCACCCTCACGGGCGTGCTCGTCCTG
CTCAACTCCGGGCTGTTCATGGTGGACCACGTCCACTTCCAGTACAACGG
GTTCCTGCTCGGGTTGCTGCTGCTGTCCCTGGGGCTCATCAGGCAGGGCA
AGGTGCTGCCGGGGGGGGCGACGTTCGCGTGCCTGCTGGTGCTCAAGCAC
CTCTTCCTGTCCCTGGCGCCGCTGTACTTCGTGCACCTCCTGAGGGGCCA
CTGCTGCTGCCGCCTCGAGAAGACGAGGGGAGCGCGCCGCGCCCCGCGAC
CGGAGACGGCGACGGCGGAGGAAGAAAATAATTTCCAGGAACCCCGCGAA
AGCGGCGGCGGATCCCCCCGCGAGGGCGGCGGCGGGGGCAAGGTGCTGCC
GGGGGGGGCGACGTTCGCGTGCCTGCTGGTGCTCAAGCACCTCTTCCTGT
CCCTGGCGCCGCTGTACTTCGTGCACCTCCTGAGGGGCCACTGCTGCTGC
CGCCTCGAGAAGACGAGGGGAGCGCGCCGCGCCCCGCGACCGGAGACGGC
GACGGCGGAGGAAGAAAATAATTTCCAGGAACCCCGCGAAAGCGGCGGCG
GATCCCCCCGCGAGGGCGGCGGCGGGGAGGCGGCGGCGCAGCTGCTGCAG
GGGGAGGGGTGCGCGGCGCGGCTGTCGTGGTGGCGGCTGGCCCGTCTCGG
CGGCGTCGTTCTGGTCGTGTTCCTGGCGGCGGTGGGGCCGCAGTGCGTCT
CCGGTGGCTGGACGCGGGAGGCGTGCTCGAGGCAGCTGAGGCAGCTTGGG
GTCAGGTTGTTCCCGTTCGGAAGGTGAGAGGCGGCGGCGCAGCTGCTGCA
GGGGGAGGGGTGCGCGGCGCGGCTGTCGTGGTGGCGGCTGGCCCGTCTCG
GCGGCGTCGTTCTGGTCGTGTTCCTGGCGGCGGTGGGGCCGCAGTGCGTC
TCCGGTGGCTGGACGCGGGAGGCGTGCTCGAGGCAGCTGAGGCAGCTTGG
GGTCAGGTTGTTCCCGTTCGGAAGGTGA
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