mRNA_L-elsbetiae_contig13545.2709.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A1B6GU98_9HEMI (RBR-type E3 ubiquitin transferase (Fragment) n=2 Tax=Proconiini TaxID=565685 RepID=A0A1B6GU98_9HEMI) HSP 1 Score: 77.0 bits (188), Expect = 4.250e-15 Identity = 32/97 (32.99%), Postives = 50/97 (51.55%), Query Frame = 1 Query: 1 CTQYMRGMSVQRCISRELATRIDAVQLEVVPTIGPEAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 C ++G + C +RE ++V + G +D D AS+ + TKPCP C T++ GGC H++C RCN+H+CW+C+ EW Sbjct: 138 CRLCLQGYHIGECQTRE----------QIVASGGSSYSVDPNRAATARWDEASRVTIRVMTKPCPKCRTATERDGGCMHMVCTRCNFHWCWVCQTEW 224
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A1B6LBH9_9HEMI (E3 ubiquitin-protein ligase parkin n=4 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6LBH9_9HEMI) HSP 1 Score: 75.5 bits (184), Expect = 7.190e-14 Identity = 34/97 (35.05%), Postives = 50/97 (51.55%), Query Frame = 1 Query: 1 CTQYMRGMSVQRCISRELATRIDAVQLEVVPTIGPEAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 C ++G + C +RE V P ++ T R DE AS+ + TKPCP C T++ GGC H++C RCN+H+CW+C+ EW Sbjct: 361 CRLCLQGYHIGECQTREQIIASGNSSYSVDP--------NRAATARWDE--ASRVTIRVMTKPCPKCRTATERDGGCMHMVCTRCNFHWCWVCQTEW 447
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A1B6DHQ5_9HEMI (E3 ubiquitin-protein ligase parkin n=6 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DHQ5_9HEMI) HSP 1 Score: 71.2 bits (173), Expect = 2.260e-12 Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 1 Query: 82 EVVPTIGPEAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 +VV G +D D AS+ + TKPCP C T++ GGC H++C RC++H+CW+C+ EW Sbjct: 385 QVVENTGQGYSIDPSRAAFARWDEASKVTIKVMTKPCPKCRTATERDGGCMHMVCTRCSFHWCWVCQTEW 454
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A069DW64_9HEMI (RBR-type E3 ubiquitin transferase (Fragment) n=1 Tax=Panstrongylus megistus TaxID=65343 RepID=A0A069DW64_9HEMI) HSP 1 Score: 68.2 bits (165), Expect = 2.440e-12 Identity = 25/75 (33.33%), Postives = 42/75 (56.00%), Query Frame = 1 Query: 67 DAVQLEVVPTIGPEAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 D +V+ T +D D A++ + + TKPCP C T++TGGC H++C RC++ +CW+C+ +W Sbjct: 60 DCESPDVLATTSSSYSVDATKAVHSRWDEATKLTIKTKTKPCPKCRTPTERTGGCMHMVCTRCDFEWCWVCQNDW 134
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A6B2LEK7_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LEK7_9EUKA) HSP 1 Score: 68.9 bits (167), Expect = 5.620e-12 Identity = 28/58 (48.28%), Postives = 35/58 (60.34%), Query Frame = 1 Query: 106 EAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWIC 279 E KL ++ DE A + + YTKPCP CS DK GGC H+ C+ C YH+CWIC Sbjct: 172 EKKLKEKKELENDE--AYKRWIKQYTKPCPKCSSPIDKNGGCNHMTCRNCGYHFCWIC 227
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A161M792_TRIIF (RBR-type E3 ubiquitin transferase (Fragment) n=1 Tax=Triatoma infestans TaxID=30076 RepID=A0A161M792_TRIIF) HSP 1 Score: 66.6 bits (161), Expect = 1.090e-11 Identity = 21/48 (43.75%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 148 DLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 D A++ + + TKPCP C T++TGGC H++C RC++ +CW+C+ +W Sbjct: 109 DEATKLTIKTKTKPCPKCRTPTERTGGCMHMVCTRCDFEWCWVCQNDW 156
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A4P6D6P2_RHOPR (E3 ubiquitin-protein ligase parkin n=2 Tax=Rhodnius TaxID=13248 RepID=A0A4P6D6P2_RHOPR) HSP 1 Score: 68.2 bits (165), Expect = 2.750e-11 Identity = 28/97 (28.87%), Postives = 48/97 (49.48%), Query Frame = 1 Query: 1 CTQYMRGMSVQRCISRELATRIDAVQLEVVPTIGPEAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 C ++G ++ C S + TI +D D A++ + + TKPCP C T++TGGC H++C RC++ +CW+C+ +W Sbjct: 364 CRNCLQGYHIEDCESPDAHA-----------TISASYSVDTTKAAHSRWDEATKHTIKTKTKPCPKCRTPTERTGGCMHMVCTRCDFEWCWVCQNDW 449
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A224XP42_9HEMI (E3 ubiquitin-protein ligase parkin n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224XP42_9HEMI) HSP 1 Score: 67.8 bits (164), Expect = 3.760e-11 Identity = 24/70 (34.29%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 82 EVVPTIGPEAKLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 +V+ T +D D A++ + + TKPCP C T++TGGC H++C RC++ +CW+C+ +W Sbjct: 380 DVLATTSSSYSVDATKAAHSRWDEATKLTIKTKTKPCPKCRTPTERTGGCMHMVCTRCDFEWCWVCQNDW 449
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: UPI0002659AEE (E3 ubiquitin-protein ligase parkin n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002659AEE) HSP 1 Score: 64.7 bits (156), Expect = 4.570e-10 Identity = 28/93 (30.11%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 1 CTQYMRGMSVQRCISRELATRIDAVQLEVVPTIGPEA-KLDQECTTRGDEDLASQALVASYTKPCPNCSIDTDKTGGCKHIICKRCNYHYCWI 276 C ++G + C ++A R + ++ T G +D++ +R D +S+ + TKPCP C T+++GGC H+ C RC+ +CWI Sbjct: 375 CRDCLQGAHIGPCQEEDVAERDLTLAMQREDTAGGTLFMVDEDRASRSRWDKSSRITIKGTTKPCPKCRTPTERSGGCMHMACGRCDLEWCWI 467
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Match: A0A2J6TCT3_9HELO (Uncharacterized protein (Fragment) n=1 Tax=Hyaloscypha bicolor E TaxID=1095630 RepID=A0A2J6TCT3_9HELO) HSP 1 Score: 64.3 bits (155), Expect = 4.770e-10 Identity = 27/63 (42.86%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 109 AKLDQECTTRGDEDLASQALVASYTKPCPN--CSIDTDKTGGCKHIICKRCNYHYCWICRCEW 291 A+ D R D++ AS+ L+AS TK CPN C +K+GGC H+ CK+C Y +C++C W Sbjct: 225 AEYDAYRQERMDQEAASEKLIASTTKKCPNPRCGHGIEKSGGCDHMTCKQCRYQFCYVCLAAW 287 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13545.2709.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13545.2709.1 >prot_L-elsbetiae_contig13545.2709.1 ID=prot_L-elsbetiae_contig13545.2709.1|Name=mRNA_L-elsbetiae_contig13545.2709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp MRGMSVQRCISRELATRIDAVQLEVVPTIGPEAKLDQECTTRGDEDLASQback to top mRNA from alignment at L-elsbetiae_contig13545:3793..4083- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13545.2709.1 ID=mRNA_L-elsbetiae_contig13545.2709.1|Name=mRNA_L-elsbetiae_contig13545.2709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=291bp|location=Sequence derived from alignment at L-elsbetiae_contig13545:3793..4083- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13545:3793..4083- >mRNA_L-elsbetiae_contig13545.2709.1 ID=mRNA_L-elsbetiae_contig13545.2709.1|Name=mRNA_L-elsbetiae_contig13545.2709.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=558bp|location=Sequence derived from alignment at L-elsbetiae_contig13545:3793..4083- (Laminarionema elsbetiae ELsaHSoW15)back to top |