mRNA_L-elsbetiae_contig1353.2700.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: A0A6H5JN08_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN08_9PHAE) HSP 1 Score: 723 bits (1865), Expect = 1.090e-243 Identity = 451/769 (58.65%), Postives = 515/769 (66.97%), Query Frame = 3 Query: 6 MLSMLTDVSLCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLTADEETVFLAVDGWAKAWKHRKATRGAATNFAVFGRSPPPAVAEQSRHIPG-GSSTSRSSSSLRTVKKTLSAADLPPSKNSQ-PQESQDAIRQRGVSGYGSGAG----DAEYSRLTRKNGTNVNGN---DCASG-------DPSAAPLRVEATAAPAASGAXXXXXXXXXXXRAEEAQQAAGKPLSPAGAGAGAAGSPKATP----------------------RGICSDDPAVASSSPDLSHSPSPTMTFTAGSVSAV------------GTGGVGR-GRIADKVSAPVVGEDSRKAAFGDTVRGVLQRRASGSAGGKERQGGWEAGLAGRPASFSHPPSPP--------KSSAVVRGPPGSSGRVAIDVSVGAGE-EEMASMPDEERAFVDELLMEIRFPLISTSFLCQAVEKSSAITGSKVAQRLLLEAYRFQAMTSTDALDVDEHFPGNHRVKYRGHERVLFGEGDSCVGTVEDFSSSLSEVHLVENVKRKDDKYWLPGQPEEAYFCVRLDRVRRLTKVRFQNRYSEEFEVAVRRTRKEEWQVIVPRRTSGGHKDVQEIDLTRKRVNARHVKISLRGRQRSCYNTSCYWTELLGF 2132 MLSMLTD +L DVCLVVE DVP HKAVLAAWSRPFRAMFTLPMLES+H+CRVVIED EHKHLMVVL Y+Y G IGL DQNV+PVSALANRYEVLPLMAQCEGYMKWRL PSNV LL+AEEH VPKA ALEYLA+HFDEV HD G+FNSLGG+TVLR+LQHDGLT DEETVFLAVDGWAKAW+HR++ RGA N+AV GRSPPPAVAEQ G GS++ R SSS +VKKTLSA D PPS ++ P QD Q G G GSGA DA S KN ++NG D +G + ++A RV T + G XXXXX R + ++ AV + P S P+ ++ T S +A+ G GG G G ++ S VG++ K VLQRRASGSAGG+ +QGG+ + R ASF HPP K++AV P SS + G G E M +P+EE+AFVDELLME+RFPL+STSFLCQ VEKS ITGS+VAQRLL EAYRFQA+ D +DVDE FPGNHRVKYRGHERVLFGE + CVG VED+SSSLSEVHLVENVK++D+KYWLPGQPEEAYFCVRLDRVRR+TK R QNRYSEEFEVAVRRTR+EEWQVIVPR+TSGGHKDV+ +DLTRKRV ARHVKISLRGR RSCYNTSCYW ELLGF Sbjct: 39 MLSMLTDPALSDVCLVVEDIDVPCHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYSGCIGLNDQNVMPVSALANRYEVLPLMAQCEGYMKWRLHPSNVVAHLLSAEEHRVPKAAAFALEYLAVHFDEVHHDG-SGDFNSLGGDTVLRVLQHDGLTVDEETVFLAVDGWAKAWEHRRSIRGATRNYAV-GRSPPPAVAEQGTQAVGVGSTSKRGSSSSHSVKKTLSATDFPPSTSTTVPGRVQDTDEQGG-GGAGSGARSVVRDAASSASLEKNPRSLNGRERPDLGAGFTLRSTTEGTSAQSRVGGTRETDSRGGSSIGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLRGEEQAV-TRRPSSSTGPTCNVSITTASNTAMRDTRSDASPGARGLGGRGSIGGASEGRSTMDVGDEPPKGVAEGEAGRVLQRRASGSAGGEGKQGGYAGEVLQRAASFWHPPXXXXXXVANVRKAAAVSS--PNSSSPIEGMTDEGKGTLETMVPIPEEEQAFVDELLMEVRFPLVSTSFLCQVVEKSPVITGSRVAQRLLHEAYRFQAIRP-DGVDVDELFPGNHRVKYRGHERVLFGEDEGCVGHVEDYSSSLSEVHLVENVKQRDEKYWLPGQPEEAYFCVRLDRVRRITKFRLQNRYSEEFEVAVRRTRREEWQVIVPRQTSGGHKDVKSLDLTRKRVKARHVKISLRGRTRSCYNTSCYWVELLGF 800
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: D7FIB0_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIB0_ECTSI) HSP 1 Score: 531 bits (1368), Expect = 1.600e-174 Identity = 327/631 (51.82%), Postives = 366/631 (58.00%), Query Frame = 3 Query: 6 MLSMLTDVSLCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLTADEETVFLAVDGWAKAWKHRKATRGAATNFAVFGRSPPPAVAEQSRHIPGGSSTSRSSSSLRTVKKTLSAADLPPSKNSQPQESQDAIRQRGVSGYGSGAGDAEYSRLTRKNGTNVNGNDCASGDPSAAPLRVEATAAPAASGAXXXXXXXXXXXRAEEAQQAAGKPLSPAGAGAGAAGSPKATPRGICSDDPAVASSSPDLSHSPSPTMTFTAGSVSAVGTGGVGRGRIADKVSAPVVGEDSRKAAFGDTVRGVLQRRASGSAGGKERQGGWEAGLAGRPASFSHPP---SPP----KSSAVVRGPPGSSGRVAIDVSVGAGEEEMASMPDEERAFVDELLMEIRFPLISTSFLCQAVEKSSAITGSKVAQRLLLEAYRFQAMTSTDALDVDEHFPGNHRVKYRGHERVLFGEGDSCVGTVEDFSSSLSEVHLVENVKRKDDKYWLPGQPEEAYFCVRL 1877 MLSMLTD +L DVCLVVEG DVP HKAVLAAWSRPFRAMFTLPMLES+H+CRVVIED EHKHLMVVL Y+Y GRIGL DQNV+PVSALANRYEVLPLMAQCEGYMKWRL PSNV LL+AEEH VPKA ALEYLA+HFDEV HD G+FNSLGG+TVLR+LQHDGLT DEETVFLAVDGWAKAW+HR++ RGA N+AV GRSPPPAVAEQ D P G G+G G NG GAG ++ S VG++ K VLQRRASG AGG+ +QGG+ ASFSHPP PP + +A V P SS + E MA +P+EE+AFVDELLME+RFPL+STSFLCQ VEKS ITGS+VAQRLL EAYRFQA+ D +DVDE FPGNHRVKYRGHERVLFGE + CVG VED+SSSLSEVHLVENVK++D+KYWLPGQPEEAYFCVR+ Sbjct: 1 MLSMLTDPALSDVCLVVEGIDVPCHKAVLAAWSRPFRAMFTLPMLESRHQCRVVIEDAEHKHLMVVLHYLYSGRIGLNDQNVMPVSALANRYEVLPLMAQCEGYMKWRLHPSNVVAHLLSAEEHRVPKAAAFALEYLAVHFDEVHHDS-SGDFNSLGGDTVLRVLQHDGLTVDEETVFLAVDGWAKAWEHRRSIRGATRNYAV-GRSPPPAVAEQ---------------------------DASP----------------GARGWG---------------GRESNG-------------------------------------------------------GAG-------------------------------------------------------EERSTMDVGDEPPKGLAEGEAGRVLQRRASGPAGGEGKQGGYXXXXXXXAASFSHPPPXXEPPVAGVRKTAAVGAPESSSPIEGMTDERKGTLETMAPIPEEEQAFVDELLMEVRFPLVSTSFLCQVVEKSPVITGSRVAQRLLHEAYRFQAIRP-DGVDVDELFPGNHRVKYRGHERVLFGEDEGCVGHVEDYSSSLSEVHLVENVKQRDEKYWLPGQPEEAYFCVRV 460
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: A0A0G4IUZ9_PLABS (BTB domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IUZ9_PLABS) HSP 1 Score: 137 bits (345), Expect = 1.800e-30 Identity = 84/213 (39.44%), Postives = 121/213 (56.81%), Query Frame = 3 Query: 1515 ELLMEIRFPLISTSFLCQAVEKSSAITGSKVAQRLLLEAYRFQAMTSTDALDVDEHFPGNHRVKYRGHERVLFGE--GDSCVGTVEDFSSSLSEVHLVENVKRKDDKYWLPGQPEEAYFCVRLDRVRRLTKVRFQNRYSEEFEVAVRRTRKEEWQVIVPRRTSGGHKDVQEIDLT------RKRVNARHVKISLRGRQRSCYNTSCYWTELLG 2129 +LL +RFP++ +SFL + VEK + G V + LLL+AYRF A++ H P + RG E +LFG+ G C + S+S H ++NV+ KDDKYWLP + A + LD + R+T++R QNR+S EF+V + +E W+ +VP SG HK V EI+L R + AR++ I L GR S Y+TS YW E+ G Sbjct: 242 DLLQLVRFPMMRSSFLYETVEKDPVVQGVGVMRDLLLQAYRFHAVSPLG------HVPDG--CQERGKEAMLFGDRVGRICASLS---TPSMSGAHPIDNVRYKDDKYWLPCNSDRAEIMLDLDGLFRITRIRMQNRHSVEFQVLFKEAHEELWRELVPITQSGRHKVVSEIELNKGVVHHRTKAVARYLLIRLLGRSHSSYHTSVYWIEVHG 443
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: A0A1S3IM45_LINUN (kelch-like protein 3 n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3IM45_LINUN) HSP 1 Score: 102 bits (254), Expect = 1.340e-18 Identity = 62/177 (35.03%), Postives = 103/177 (58.19%), Query Frame = 3 Query: 33 LCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEV-QHDPLGGNFNSLGGETVLRMLQHDGLTAD-EETVFLAVDGW 557 LCDV ++V+GK++PAHK+VL++ S F AMFT + E++ RV+++DV+ K L ++ +IY IG+T++NV + + AN +++ + C +++ +L PSN A+ H + ++ A Y HF EV +HD F +L V ++ D L+ EE VF +V GW Sbjct: 43 LCDVLIIVDGKEIPAHKSVLSSCSPYFYAMFTNDLSEARSN-RVMLQDVDGKALTQLIDFIYTSEIGVTEENVQILLSAANLLQLVEVRNACCEFLQSQLHPSNCLGIKDFADLHACTELMNYAQAYTEQHFSEVVKHD----EFLNLSSSQVTELISSDRLSVQSEENVFESVIGW 214
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: UPI001403252F (kelch-like protein 2 isoform X1 n=2 Tax=Amblyraja radiata TaxID=386614 RepID=UPI001403252F) HSP 1 Score: 94.7 bits (234), Expect = 3.980e-16 Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 3 Query: 33 LCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLT-ADEETVFLAVDGWAK 563 LCDV LV E ++PAHK VLAA S F AMFT M ES+ + RV I++V+ L +++ Y+Y I +T++NV + A ++ + C +++ +L P+N A+ H + ++ A Y HF EV G F +LG + V ++ D LT + EE VF A W K Sbjct: 69 LCDVTLVAEDTEIPAHKVVLAACSPYFHAMFTGEMSESKAK-RVRIKEVDKWTLNILIDYVYTAEIQVTEENVQVLLPAAGLLQLQDVRKSCCDFLESQLHPTNCLGIRAFADMHACTELLNQANTYAEQHFSEVVS---GEEFLNLGIDQVCGLIASDMLTISSEEKVFEAAIAWVK 242
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: A0A226CWC2_FOLCA (Kelch-like protein diablo n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226CWC2_FOLCA) HSP 1 Score: 93.2 bits (230), Expect = 1.090e-15 Identity = 57/176 (32.39%), Postives = 92/176 (52.27%), Query Frame = 3 Query: 30 SLCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLTADEETVFLAVDGW 557 SLCDV L+ E ++PAH+ +LAA S F AMFT E + + +V I VE L +++ Y+Y G+I +++ NV + AN ++ + C ++K ++ PSN A+ H + ++ +F +V G F SL + V+ ++ D LT EETVF +V W Sbjct: 75 SLCDVTLIAEELEIPAHRMILAACSPYFYAMFT--SFEEKDKEKVKILGVEPTSLQILVTYVYTGQISISEDNVQTLLPAANLLQLHDVKEACSDFLKSQIHPSNCLGIRAFADLHGCLDLLTATETFIEFNFADVVE---GEEFLSLNVQEVIALISSDKLTTSEETVFESVLNW 245
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: L8HAB9_ACACA (BTB/POZ domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HAB9_ACACA) HSP 1 Score: 94.4 bits (233), Expect = 1.190e-15 Identity = 52/138 (37.68%), Postives = 77/138 (55.80%), Query Frame = 3 Query: 39 DVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPL 452 DV LVVEG+D+ AHKA+L A S FRAMFTL M E+ + + D+ ++ +L+Y+Y + L ++ VV + AN+Y +LPL QCE +++ LS N L A +ALEY+ H E + + L Sbjct: 847 DVKLVVEGRDIQAHKAILCARSSHFRAMFTLGMREATTNV-IEVGDISYEVFATILRYLYAAEVELQEETVVELMISANQYVLLPLQEQCEAFIEQGLSAENAGYFLEMANRFQAQHLKALALEYMVQHRAEFESECL 983
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: R1F7R2_EMIHU (BTB domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F7R2_EMIHU) HSP 1 Score: 93.2 bits (230), Expect = 1.420e-15 Identity = 70/198 (35.35%), Postives = 99/198 (50.00%), Query Frame = 3 Query: 3 MMLSMLTDVSLCDVCLVV-----EGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHR----CRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLTA-DEETVFLAVDGWAKA 566 M+ M D L D CLVV E ++ AH+AVL A SRPFRAM L HR R+V+++V L +L+++YG + LT +N +P+ A+ YEVL L C ++K N L A++ H ++ L HF +V +F SL G+ +L +LQ D L+A EE V AV W A Sbjct: 48 MLAKMWEDEELKDCCLVVQEEGCEPTELWAHRAVLVAASRPFRAM-----LAGSHRERGANRLVLQEVSAAPLAELLRFVYGQEVQLTAENALPLYRTADLYEVLELATLCCAFLKRSAGVGNCVALLAASDTAHCKPVALHCIDLLKRHFGQVAER---ASFVSLPGQLLLEVLQADDLSAPSEELVLSAVLSWLDA 237
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: UPI0013AF5614 (kelch-like protein 6 n=1 Tax=Etheostoma spectabile TaxID=54343 RepID=UPI0013AF5614) HSP 1 Score: 89.4 bits (220), Expect = 1.440e-15 Identity = 61/179 (34.08%), Postives = 91/179 (50.84%), Query Frame = 3 Query: 33 LCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLTAD-EETVFLAVDGWAKA 566 L DV L V+G D H+A+LAA S+ FRAMF + ES RV I ++ + +L+Y Y R LT NV + A++++ L ++ C G++ L + L AE H +P VA +Y+ F +V P +F L E++ +LQ D L EE VF A+ W +A Sbjct: 59 LTDVVLCVQGHDFLCHRAILAAASQYFRAMFCSGLKESNEE-RVKINGLDSGTMQSLLEYTYTSRALLTHSNVQRILEAASQFQFLRVVDACSGFLSKSLQLESCIGILNLAENHALPALKTVAQDYIVTKFSQVVQQP---DFLDLPAESLEAVLQRDDLDVKCEECVFEALMRWVRA 233
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Match: A0A423T5L3_PENVA (Kelch-like protein diablo n=14 Tax=Decapoda TaxID=6683 RepID=A0A423T5L3_PENVA) HSP 1 Score: 92.8 bits (229), Expect = 1.590e-15 Identity = 57/176 (32.39%), Postives = 93/176 (52.84%), Query Frame = 3 Query: 33 LCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHRCRVVIEDVEHKHLMVVLQYIYGGRIGLTDQNVVPVSALANRYEVLPLMAQCEGYMKWRLSPSNVCQQLLAAEEHHVPKAVDVALEYLAMHFDEVQHDPLGGNFNSLGGETVLRMLQHDGLTA-DEETVFLAVDGW 557 LCDV LV + +VPAHK VLA+ S F AMFT E + R+V++D++ L +++ Y+Y + +T++NV + AN ++ + C +++ +L P+N A+ H + + +A Y+ HF EV F SL + V++++ D LT EE VF V W Sbjct: 67 LCDVVLVADSVEVPAHKMVLASCSPYFHAMFT--SFEESRQDRIVLQDIDGSALQLLIDYVYTAEVLVTEENVQVLLPAANLLQLTDVRDACCDFLQSQLHPTNCLGIRAFADLHGCLELLSIAESYVEQHFCEVVECE---EFLSLTSQQVIKLISSDRLTTPSEEKVFECVMSW 237 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1353.2700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1353.2700.1 >prot_L-elsbetiae_contig1353.2700.1 ID=prot_L-elsbetiae_contig1353.2700.1|Name=mRNA_L-elsbetiae_contig1353.2700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=711bp MMLSMLTDVSLCDVCLVVEGKDVPAHKAVLAAWSRPFRAMFTLPMLESQHback to top mRNA from alignment at L-elsbetiae_contig1353:6295..13954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1353.2700.1 ID=mRNA_L-elsbetiae_contig1353.2700.1|Name=mRNA_L-elsbetiae_contig1353.2700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7660bp|location=Sequence derived from alignment at L-elsbetiae_contig1353:6295..13954+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1353:6295..13954+ >mRNA_L-elsbetiae_contig1353.2700.1 ID=mRNA_L-elsbetiae_contig1353.2700.1|Name=mRNA_L-elsbetiae_contig1353.2700.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4266bp|location=Sequence derived from alignment at L-elsbetiae_contig1353:6295..13954+ (Laminarionema elsbetiae ELsaHSoW15)back to top |