mRNA_L-elsbetiae_contig13510.2691.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13510.2691.1
Unique NamemRNA_L-elsbetiae_contig13510.2691.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: D7FRI0_ECTSI (M20_dimer domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRI0_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 1.350e-127
Identity = 191/230 (83.04%), Postives = 203/230 (88.26%), Query Frame = 1
Query:    4 VEYGDITSDEAVEFCLQNADTARADTLALTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSIGSGSPRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASIPDFKLRPTLSFFQSTAEKG 693
            +EYGDITSDEAV FCL +   AR DTL+L QAMIRNR ENFGDG   ES++IKVLQDYLE HGLQ+ECHARPERPER N+V SIGSGSPRVMLGPAHVDVVP TPDDASQ    QVYSGWDE+PWSGTV DG++FGRGAVDMLNTVAAM V FVS+KES GV L GTLLFCAVSDEEAGGEDGAKFILSDP LK+LF ADYCVTELGGASIPDFKLRPTLSFFQSTAEKG
Sbjct:    3 IEYGDITSDEAVGFCLPDPRKAREDTLSLLQAMIRNRCENFGDGLCKESRSIKVLQDYLEGHGLQTECHARPERPERHNIVSSIGSGSPRVMLGPAHVDVVPATPDDASQV--QQVYSGWDEDPWSGTVTDGEVFGRGAVDMLNTVAAMAVAFVSIKES-GVALNGTLLFCAVSDEEAGGEDGAKFILSDPGLKKLFTADYCVTELGGASIPDFKLRPTLSFFQSTAEKG 229          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A835YY18_9STRA (M20_dimer domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY18_9STRA)

HSP 1 Score: 194 bits (492), Expect = 4.340e-55
Identity = 106/225 (47.11%), Postives = 142/225 (63.11%), Query Frame = 1
Query:   10 YGDITSDEAVEFCLQNADTARADTLALTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSIGSGSPRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLL--------------FCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASIPD 642
            Y DITSDEAV     +    R + + L Q +IRN+ ++FGDG   E  NI  L  + + + ++ + + RP++P R NL+ S GSGSPRVMLGP+HVDVVP     A + P+      W   P+SG + DG++ GRGAVDMLN VA   V F  +++ A +KLKGTLL              FCAVSDEE+GG DGAKF++ DP L+++F ADY +TELGG SIP+
Sbjct:    6 YDDITSDEAVALLGGSPLDVRTEAVHLLQELIRNKCQSFGDGLCKEEANIDTLLKFFKKYDIECQTYHRPDKPARLNLIASYGSGSPRVMLGPSHVDVVP-----AVEGPN------WSAPPFSGDIVDGEVVGRGAVDMLNLVACQAVVFARLRK-AKMKLKGTLLLLCXXXXXXXXXXXFCAVSDEESGGGDGAKFLMEDPTLRQVFAADYTLTELGGMSIPN 218          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: W7TSP2_9STRA (Peptidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSP2_9STRA)

HSP 1 Score: 179 bits (454), Expect = 5.670e-50
Identity = 90/208 (43.27%), Postives = 132/208 (63.46%), Query Frame = 1
Query:   79 TLALTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSIGSGS---PRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASIPDFKLRPTLSFFQSTAEKG 693
            T++L Q++IRN   N GDG   E  NI+ L  + + +G++ + +  P RP R +L+     G+   PRVMLGP HVDVVP                 WD  P+   +  G+++GRG++DMLNTVAA  V F  +  S  + ++GTL+FCAVSDEEAGG DGA F++++PKL+++F ADYC+TE GGA++PD   RP+ +++  + EKG
Sbjct:   26 TVSLLQSLIRNACVNCGDGSCEEVTNIRTLAAFFDKYGIKYQVYHPPHRPNRPSLIAEYHGGTGIGPRVMLGPGHVDVVPAN------------EKAWDVPPFEARLVGGEVWGRGSLDMLNTVAAQAVAFACLATSR-LPMRGTLIFCAVSDEEAGGADGAGFLMNEPKLRDIFRADYCMTEFGGATLPDRYNRPSRTYYHVSGEKG 220          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: UPI0019E47F29 (M20/M25/M40 family metallo-hydrolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI0019E47F29)

HSP 1 Score: 116 bits (290), Expect = 1.150e-26
Identity = 85/205 (41.46%), Postives = 110/205 (53.66%), Query Frame = 1
Query:   88 LTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSIGSGSPR---VMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASIPDFKLRPTLSFFQSTAEKG 693
            L + MIRN+  N      +E ++I+ LQ+Y  A G++S+     E  ER NL   I    P+   + LGP HVDVVPV  +DAS          W  NPW G  KDG ++GRGA DML  VA   V F  + +  G + KG L+F AVSDEEAGG  GAK++L +    EL   D+ VTE GG     F + P+   F    EKG
Sbjct:   13 LLKEMIRNKCVN---PPGNEMRSIRTLQEYFAARGVESQIFESAE--ERGNLYARIEGTDPKHPSLTLGPCHVDVVPV--EDASA---------WTVNPWEGIEKDGFIWGRGAFDMLFIVACQAVVFAGLVQE-GFRPKGDLVFLAVSDEEAGGLFGAKWMLDNHP--ELVKTDFAVTESGG-----FPMAPSRYVFM-VGEKG 192          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A524M772_THOAR (M20/M25/M40 family metallo-hydrolase n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A524M772_THOAR)

HSP 1 Score: 111 bits (278), Expect = 4.050e-26
Identity = 73/182 (40.11%), Postives = 102/182 (56.04%), Query Frame = 1
Query:   88 LTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSI-GSGS-PRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGG 627
            L Q MIRN+  N      +E K+I+ ++ +L ++G++SE       PER NL+  + G+G  P  MLGPAHVDVVPV           +    W   P+ GT+KDG ++GRGA+DML  VA+  V F  + +  G K KG L  C V+DEEA G  GA +++ +   K     DY +TE GG
Sbjct:   10 LMQEMIRNKCIN---PPGNEMKSIRTVEKFLSSYGIESEIFE--SAPERGNLLTEMKGTGDRPSFMLGPAHVDVVPV-----------ENEKDWKVPPFEGTIKDGCIWGRGALDMLYIVASQTVVFAKLHQD-GFKPKGNLKLCIVADEEASGNYGANWLVQNHPEKVK--VDYLITEAGG 172          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A7W1LTX1_9ACTN (M20/M25/M40 family metallo-hydrolase n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LTX1_9ACTN)

HSP 1 Score: 114 bits (285), Expect = 5.660e-26
Identity = 82/203 (40.39%), Postives = 113/203 (55.67%), Query Frame = 1
Query:   58 ADTARADTLALTQAMIRNRVENFGDGKA-HESKNIKVLQDYLEAHGLQSECHARPERPE-RQNLVCSIGSGSPRV----MLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASIPDFK 648
            AD     T  L Q++IRN   N G  ++ +E++N  +LQ YLE  GL     AR E+ E R ++V  I    P      ++G  H DVVPV P+            GW   P+SG V DG+++GRGA+DMLN  A+M V F  +    G + KG L++  V+DEEAGGE GA+F++++    +   ADY VTELGG S  D K
Sbjct:    6 ADELVGPTTELLQSLIRNECVNDGTPESGYETRNADLLQTYLEGAGLDV---ARFEKQEGRASIVARIEGSDPDAASLCLMG--HTDVVPVNPE------------GWSREPFSGEVLDGEVWGRGAIDMLNITASMAVAFRRLANE-GFQPKGDLIYFGVADEEAGGEWGAEFMVNEHW--DAVGADYVVTELGGWSQVDGK 188          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A842N7T2_9ARCH (M20/M25/M40 family metallo-hydrolase n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A842N7T2_9ARCH)

HSP 1 Score: 113 bits (282), Expect = 9.880e-26
Identity = 72/164 (43.90%), Postives = 98/164 (59.76%), Query Frame = 1
Query:  166 LQDYLEAHGLQSECHARPERPERQNLVCSI-GSGSPRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSD-PKLKELFCADYCVTELGGASIPDFKL 651
            +Q  L  HG++S        P R NLV  I G   PR+M GP+HVDVVPV   D+           W+E+P+SG+VK+G ++GRGA+DML  VAA +  F+ + E  G +  G L+   VSDEEAGG  GA++++ + P+L E   ADY VTE GG SI   K+
Sbjct:    1 MQRTLREHGIESRVFE--SAPNRGNLVARIEGGDGPRLMFGPSHVDVVPVENVDS-----------WEEDPFSGSVKNGYVWGRGALDMLFIVAAQVRAFIELHEE-GFRPSGELILLVVSDEEAGGTHGARWMIENHPELVE---ADYAVTEAGGISIAPGKI 147          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A661VG39_9CHLR (M20_dimer domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A661VG39_9CHLR)

HSP 1 Score: 112 bits (281), Expect = 2.310e-25
Identity = 82/205 (40.00%), Postives = 106/205 (51.71%), Query Frame = 1
Query:   88 LTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSIGSGSPR---VMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASIPDFKLRPTLSFFQSTAEKG 693
            L +AMIRN+  N      +E ++I+ LQDY  AHG++S+     E   R NL   I    P    + LGP HVDVVPV           +    W  +PW G  KDG ++GRGA DML  VA     F S+ +  G + KG L+F AVSDEEAGG  G K++L +    EL   D+ VTE GG     F + P+   F    EKG
Sbjct:   13 LLKAMIRNKCVN---PPGNELRSIRTLQDYFAAHGVESQIFESAEG--RGNLYARIEGTDPNHPSLTLGPCHVDVVPV-----------EDPGTWTVDPWEGVEKDGFIWGRGAFDMLFIVACQAAVFASLVQE-GFRPKGDLVFLAVSDEEAGGLFGTKWMLDNHP--ELVKTDFAVTESGG-----FPIAPSRYVFM-VGEKG 192          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A7K4IA45_THOAR (M20/M25/M40 family metallo-hydrolase n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A7K4IA45_THOAR)

HSP 1 Score: 112 bits (280), Expect = 2.820e-25
Identity = 79/190 (41.58%), Postives = 103/190 (54.21%), Query Frame = 1
Query:   76 DTLALTQAMIRNRVENF-GDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSI--GSGSPRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCADYCVTELGGASI 636
            D + L Q MIRNR  N  GD    E +NI+ ++ YL++ G+QSE       P R NL+  I   + +P +MLGPAHVDVVPV           Q  S W   P+ G V++G ++GRGA+DML  VAA  V F  +    G + KGTL    VSDEE  GE GA +++      E    DY VTE GG  +
Sbjct:    7 DAVGLLQEMIRNRCVNPPGD----EMRNIRTVEKYLDSQGIQSEVFE--SSPNRGNLLAEIRGDTSAPSLMLGPAHVDVVPV-----------QDESRWRYPPFGGVVEEGCVWGRGALDMLYIVAAQTVAFAHLHND-GFRPKGTLKLLIVSDEECAGEAGALWMIKHHP--ERVKVDYLVTEPGGEPV 176          
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Match: A0A842QEL5_9ARCH (M20/M25/M40 family metallo-hydrolase (Fragment) n=1 Tax=Candidatus Lokiarchaeota archaeon TaxID=2053489 RepID=A0A842QEL5_9ARCH)

HSP 1 Score: 107 bits (268), Expect = 3.430e-25
Identity = 73/193 (37.82%), Postives = 112/193 (58.03%), Query Frame = 1
Query:   70 RADTLALTQAMIRNRVENFGDGKAHESKNIKVLQDYLEAHGLQSECHARPERPERQNLVCSI-GSGS-PRVMLGPAHVDVVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAMLVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSD--PKLKELFCADYCVTELGGASI 636
            R +++ L Q +++N+  N      +E K+IK +  YL+++G+++E         R NL+C+I G+G  P +MLGPAHVDVVPV  +D S+         W+  P+SG ++DG ++GRG +DML  VA     F  + +  G + KG L F  VSDEEA G+ GA +++ +   K+K     DY +TE GG  I
Sbjct:    4 REESIELIQELVKNKCVN---PPGNEMKSIKSVNRYLQSYGIETEIFETDTN--RGNLLCTIEGTGQGPSLMLGPAHVDVVPV--EDPSK---------WEVPPFSGKIEDGCIWGRGTLDMLYIVATQAAVFAHLYDE-GFQPKGDLKFLVVSDEEAAGQYGAGYMVKNHPDKVK----VDYLITETGGHPI 175          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13510.2691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRI0_ECTSI1.350e-12783.04M20_dimer domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YY18_9STRA4.340e-5547.11M20_dimer domain-containing protein n=1 Tax=Tribon... [more]
W7TSP2_9STRA5.670e-5043.27Peptidase n=1 Tax=Nannochloropsis gaditana TaxID=7... [more]
UPI0019E47F291.150e-2641.46M20/M25/M40 family metallo-hydrolase n=1 Tax=Chlor... [more]
A0A524M772_THOAR4.050e-2640.11M20/M25/M40 family metallo-hydrolase n=1 Tax=Thora... [more]
A0A7W1LTX1_9ACTN5.660e-2640.39M20/M25/M40 family metallo-hydrolase n=2 Tax=Acidi... [more]
A0A842N7T2_9ARCH9.880e-2643.90M20/M25/M40 family metallo-hydrolase n=1 Tax=Candi... [more]
A0A661VG39_9CHLR2.310e-2540.00M20_dimer domain-containing protein n=1 Tax=Chloro... [more]
A0A7K4IA45_THOAR2.820e-2541.58M20/M25/M40 family metallo-hydrolase n=1 Tax=Thora... [more]
A0A842QEL5_9ARCH3.430e-2537.82M20/M25/M40 family metallo-hydrolase (Fragment) n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13510contigL-elsbetiae_contig13510:419..3990 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score378.6
Seed ortholog evalue2e-102
Seed eggNOG ortholog2880.D7FRI0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.aminoacylase activity
EggNOG OGsCOG0624@1,KOG2275@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionPeptidase M20, dimerisation domain
Ec32 orthologEc-09_000030.1
Exons6
Model size693
Cds size693
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13510.2691.1prot_L-elsbetiae_contig13510.2691.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13510 419..3990 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815520.755401-CDS-L-elsbetiae_contig13510:418..5541622815520.755401-CDS-L-elsbetiae_contig13510:418..554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 419..554 -
1691682938.3571093-CDS-L-elsbetiae_contig13510:418..5541691682938.3571093-CDS-L-elsbetiae_contig13510:418..554Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 419..554 -
1622815520.768912-CDS-L-elsbetiae_contig13510:865..9411622815520.768912-CDS-L-elsbetiae_contig13510:865..941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 866..941 -
1691682938.3678894-CDS-L-elsbetiae_contig13510:865..9411691682938.3678894-CDS-L-elsbetiae_contig13510:865..941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 866..941 -
1622815520.7808118-CDS-L-elsbetiae_contig13510:1874..19351622815520.7808118-CDS-L-elsbetiae_contig13510:1874..1935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 1875..1935 -
1691682938.3779027-CDS-L-elsbetiae_contig13510:1874..19351691682938.3779027-CDS-L-elsbetiae_contig13510:1874..1935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 1875..1935 -
1622815520.7955282-CDS-L-elsbetiae_contig13510:2341..25141622815520.7955282-CDS-L-elsbetiae_contig13510:2341..2514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 2342..2514 -
1691682938.3898852-CDS-L-elsbetiae_contig13510:2341..25141691682938.3898852-CDS-L-elsbetiae_contig13510:2341..2514Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 2342..2514 -
1622815520.8111708-CDS-L-elsbetiae_contig13510:2991..31421622815520.8111708-CDS-L-elsbetiae_contig13510:2991..3142Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 2992..3142 -
1691682938.3980217-CDS-L-elsbetiae_contig13510:2991..31421691682938.3980217-CDS-L-elsbetiae_contig13510:2991..3142Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 2992..3142 -
1622815520.8283591-CDS-L-elsbetiae_contig13510:3894..39901622815520.8283591-CDS-L-elsbetiae_contig13510:3894..3990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 3895..3990 -
1691682938.408911-CDS-L-elsbetiae_contig13510:3894..39901691682938.408911-CDS-L-elsbetiae_contig13510:3894..3990Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13510 3895..3990 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13510.2691.1

>prot_L-elsbetiae_contig13510.2691.1 ID=prot_L-elsbetiae_contig13510.2691.1|Name=mRNA_L-elsbetiae_contig13510.2691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=231bp
MVEYGDITSDEAVEFCLQNADTARADTLALTQAMIRNRVENFGDGKAHES
KNIKVLQDYLEAHGLQSECHARPERPERQNLVCSIGSGSPRVMLGPAHVD
VVPVTPDDASQAPDDQVYSGWDENPWSGTVKDGQLFGRGAVDMLNTVAAM
LVTFVSVKESAGVKLKGTLLFCAVSDEEAGGEDGAKFILSDPKLKELFCA
DYCVTELGGASIPDFKLRPTLSFFQSTAEKG
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mRNA from alignment at L-elsbetiae_contig13510:419..3990-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13510.2691.1 ID=mRNA_L-elsbetiae_contig13510.2691.1|Name=mRNA_L-elsbetiae_contig13510.2691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3572bp|location=Sequence derived from alignment at L-elsbetiae_contig13510:419..3990- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAATACGGGGATATAACAAGCGATGAGGCTGTGGAATTTTGTCT GCAGAATGCGGATACAGCGAGGGCTGACACGCTCGCACTAACGCAGGTGA ACGCGGCAGCATAGCGTAAGTGACATAAGATACCACCCCCCCCTGCACAG ATTTCGAAAGCTCGATTCCTCCCCAGCAAGAAGAGTGCCAGTGCCAAAAG GGAGTAGGGTTGAAATATTCTAGCCAAAGTCTCTTCGAAAATGTACCGTT TGGTGTTGGCGCCTTCTTCGCTATGGAGTAATGGAACTCTAAAAGTCAGT CCAGGGGGGTGGTATCTTGTGTCACCTACGGTATCCTACTGCCGTCCAGC TTGTTGTGCGCACAAATGTGCGCGTCTTGCGGGAGACAGATGACACTGGT ACGGATGGCCAACAAGTGGGCGTTTGCTCGACGTCGCATGCCGCACACAA CAGATGTGTTGAACGGAGAGGGAAGTGTAGAGGGTTCAGTCCTTGCACGT GTAGATAGTTACTTGCAGACCCACGGCTAGGATAGCACTGGCTTACCACA TCCCTCAACCTTCACACGTTGTGTGTCGAGGGGTTTTGAAAAGAGGAGTG GAGGCATGGCGATCAGAAATGGAGCCGATCACTCGACGATGGAATTTCGG AAAGACAGACCTCTATGGAACGTGTCCGCTGGGTAGCAAGAGAGCGGAGA GTCTCCCAGGAAGATTGTTGACGCAGTGAAATATTAGATCCTTGGAACCA ATCCTGCTAAGCCCCGCATATCGTTCAACATCAAGTGACACCAAAGTCAA AGAGACCAGCACCGATTGATGGCGTTTTTTCGCCTCATCCCTGTCCAGGC AATGATCCGAAACAGAGTCGAGAATTTCGGCGATGGCAAAGCCCATGAAA GTAAAAATATCAAGGTTCTGCAGGATTACTTGGAGGCGCACGGCCTGCAG TCGGAGTGCCATGCTAGGCCCGAACGGCCAGAGCGCCAAAACCTTGTTTG TAAGTGGGACTCTGAATGCATTATTTTTTCGAACGACTTTGAAGCTACTG CTGTTGATGTTGTTGATGCTGACGTTCACGACGACCATGGGGGTGACAAA ATGTTGTTGTTTCATGAGCTTTGCGGATCTTCGGTGCTGGACGCAGAAGG GGCTTAACACTATCACATGCAAGCCGCCAGAAAGATTACTATTCCTGACA ACAACTCCAATCGCAGCACAAACTTGCGGCATGTGGTGGATACCTTGCAG CCAGCGCCGCATCGTCCATGTAACTGCTGCGTTCATCCCGTTGAGAAGTA AAATCACTGGTACGGGCGGACGGATGGATGTGCGAACATACAGGCGTTGG GCGACGGCGTGATGATCACAGGGTCGATCCCTTCTCGTGTGGGGTTGTGC AATAAAAATATCACTACTATGAAGACTGACCCATGTGCATTCTTGCTACT TTCTGACGGGTTTTTTGTGGTTGCAGGCAGCATCGGGTCCGGCTCTCCCA GGGTTATGCTGGGGCCGGCGCACGTGGACGTTGTCCCCGTCACCCCGGAT GATGCGTCCCAAGCCCCGGACGATCAGGTGTACAGCGGCTGGGACGAGAA TCCCTGGTCGGGCACGGTGAAGGATGGACAGCTGTTCGGCAGAGGCGCGG TGAGGACATTGACTATAAGAGGTGTAAAGACACTTCGAAGTATAGGTTAG TACCGAGTGCAGGGAGAAACGGTATATAAAGAGTTACACTGGTGTAGTCG GAGAAGCACTGGCCAGATGGCGGGGCATCAGAGAGTTTTGGGTTGGGTGC TGGTCTGCGTCAACATGAGGCACTGTATCGGCAAAACGCAGATTTTTTTT GGGATGTGCCCTTCATGTGTTGATATCTCCAAAGCATCGCGTCGTTCGAA CAAACCATCTCTCTCTCTCTCTCTCTCTCTGGGCATGTCTAAGTATAGTT GTCGTCCTATATCCTTCTCTTGTGGTGAATGTAATTTTTCCCGGCGTCAC GTCTCTTCTTTTATGTCCTTGTGTTTTCGTCTGCTCAATTCCGATGAGGC TGAAGGTCGACATGCTCAACACGGTAGCGGCTATGCTGGTTACCTTCGTC AGCGTTAAGGAAAGCGGTGAGGTTCACTTGCTTTTGTCACATAGAAACAG CCCAATATTACGTTGGTTATCTCGAGCGTTTTCGCCCCCAAGTGCTTGTG CCTTATTATAATGCTTGTGGTTTGGGCTTTTGAGCTGCGCATACCCATAT GGGCTGAAAACACGTACACATACATACCTCGATACATCCTGGTTGCTTCA CTACTGCAAGTCGACCTACTAGATACCAACCTGTGCCGTATTTGACTGTT GATCGATGGCCTCTCCCGAGTCGCTCTTGTTTGCCGGGAGGAAGTTAGCC CGGTTCCTGGGCTAACTTTTAAGTAACGGTTTGTCGTTCCTGCAGGTTGC CGTTCTCTTGTTGCTGCTACTGCAGCCGACGGTGCCCATGTGTTGTTACT GCCGTTACTCGGTTTGTGGCTTTTGGGAGGGGTAGTTAACTGTTGTTGTT GCCGTTATCGTCGGTTTTTGTTGCTGCTGTTGGAAATGGTTCCTGGGGCG GTTTTAGTTACATTTCTTGGCCAATATATGTACGTAGTCCCCTCCCATGC CCGTTTGATACCCCACTCCCGGCGTGGGGTATGCTAAATATCATGTTTGC CCTCAACTCGACAAAAATGCGTACAAATATCACAATCCGAGCCCCGGCCC CAAACGTGCTTGTTTCGGCATACTGCACCCCACCCATTCCCTTATGCTTG ACAAAAGTGGTCACATAATTGAGCTGAAATGGCCCGAAACGGCCGTTTCA GCTCAAAGAAAATGACTCTATTTCATCCGGGGGTGTTTGGTGGTTTACTC TAGAAGAACGCCCAGTAGCTTAGAGGTTTGCTTAGAGCACGGGGTTTAAA ATATGCTGCCAAATCGTCGCAGCGACGTTAAAGCCACACATGCGCTGAGA AGCCCACCTCTTGAACTCTGATGAATTCCCCTTTTTGGTGTGTGAGGAGC AGGGGTGAAGCTCAAAGGGACCCTGCTTTTCTGCGCTGTCAGCGACGAAG AGGCTGGAGGGGAGGATGGCGCAAAGTACGTACATGTAGATGGGCTGGGG GGGAATAGAGTGCGTTGGGTAGTGCTTGGCAATTAATACGTCACAAAGGG TGCTTGGTGCAGATCGAGAGCCTGTCTTTGGTACGTGGGCTTTCCCAACA TACATACTCGAGGGTATGTCGCTTGTTCTATGATATCATCGTCACTGTTG TACAATTTGGCACGGGGCGTCGCTTCTACTGAGGGGTTCCAGTTGCTTTA TCGACACCTAAATCTGCTCCCTCCCAGATCTGAAACACGTTCAGATCTGT TTCGTTTTGTTTTGCTTACTCGCTTCGCCGACACAGGTTCATCTTGAGCG ACCCAAAGCTGAAAGAGCTCTTCTGTGCCGACTACTGTGTCACCGAGCTA GGCGGTGCTTCCATCCCCGACTTCAAGCTCCGGCCCACGCTTTCGTTTTT CCAGAGCACGGCAGAGAAGGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13510:419..3990-

>mRNA_L-elsbetiae_contig13510.2691.1 ID=mRNA_L-elsbetiae_contig13510.2691.1|Name=mRNA_L-elsbetiae_contig13510.2691.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1386bp|location=Sequence derived from alignment at L-elsbetiae_contig13510:419..3990- (Laminarionema elsbetiae ELsaHSoW15)
ATGGTGGAATACGGGGATATAACAAGCGATGAGGCTGTGGAATTTTGTCT
GCAGAATGCGGATACAGCGAGGGCTGACACGCTCGCACTAACGCAGATGG
TGGAATACGGGGATATAACAAGCGATGAGGCTGTGGAATTTTGTCTGCAG
AATGCGGATACAGCGAGGGCTGACACGCTCGCACTAACGCAGGCAATGAT
CCGAAACAGAGTCGAGAATTTCGGCGATGGCAAAGCCCATGAAAGTAAAA
ATATCAAGGTTCTGCAGGATTACTTGGAGGCGCACGGCCTGCAGTCGGAG
TGCCATGCTAGGCCCGAACGGCCAGAGCGCCAAAACCTTGTTTGCAATGA
TCCGAAACAGAGTCGAGAATTTCGGCGATGGCAAAGCCCATGAAAGTAAA
AATATCAAGGTTCTGCAGGATTACTTGGAGGCGCACGGCCTGCAGTCGGA
GTGCCATGCTAGGCCCGAACGGCCAGAGCGCCAAAACCTTGTTTGCAGCA
TCGGGTCCGGCTCTCCCAGGGTTATGCTGGGGCCGGCGCACGTGGACGTT
GTCCCCGTCACCCCGGATGATGCGTCCCAAGCCCCGGACGATCAGGTGTA
CAGCGGCTGGGACGAGAATCCCTGGTCGGGCACGGTGAAGGATGGACAGC
TGTTCGGCAGAGGCGCGGCAGCATCGGGTCCGGCTCTCCCAGGGTTATGC
TGGGGCCGGCGCACGTGGACGTTGTCCCCGTCACCCCGGATGATGCGTCC
CAAGCCCCGGACGATCAGGTGTACAGCGGCTGGGACGAGAATCCCTGGTC
GGGCACGGTGAAGGATGGACAGCTGTTCGGCAGAGGCGCGGTCGACATGC
TCAACACGGTAGCGGCTATGCTGGTTACCTTCGTCAGCGTTAAGGAAAGC
GGTCGACATGCTCAACACGGTAGCGGCTATGCTGGTTACCTTCGTCAGCG
TTAAGGAAAGCGCAGGGGTGAAGCTCAAAGGGACCCTGCTTTTCTGCGCT
GTCAGCGACGAAGAGGCTGGAGGGGAGGATGGCGCAAACAGGGGTGAAGC
TCAAAGGGACCCTGCTTTTCTGCGCTGTCAGCGACGAAGAGGCTGGAGGG
GAGGATGGCGCAAAGTTCATCTTGAGCGACCCAAAGCTGAAAGAGCTCTT
CTGTGCCGACTACTGTGTCACCGAGCTAGGCGGTGCTTCCATCCCCGACT
TCAAGCTCCGGCCCACGCTTTCGTTTTTCCAGAGCACGGCAGAGAAGGGT
GTTCATCTTGAGCGACCCAAAGCTGAAAGAGCTCTTCTGTGCCGACTACT
GTGTCACCGAGCTAGGCGGTGCTTCCATCCCCGACTTCAAGCTCCGGCCC
ACGCTTTCGTTTTTCCAGAGCACGGCAGAGAAGGGT
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