mRNA_L-elsbetiae_contig135.2683.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: D7FHF6_ECTSI (Ribosomal protein L37 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF6_ECTSI) HSP 1 Score: 162 bits (409), Expect = 3.240e-50 Identity = 78/87 (89.66%), Postives = 79/87 (90.80%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATKNG 264 TKGTASFGKRH KTHTACRRCGRTSFHKQKKVC+SCGYP KMRRFNWSEKAKRRRTQGTGRMR MKTLPRRFKNGF EG A KNG Sbjct: 2 TKGTASFGKRHNKTHTACRRCGRTSFHKQKKVCSSCGYPGTKMRRFNWSEKAKRRRTQGTGRMRSMKTLPRRFKNGFHEGGSAPKNG 88
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: A0A835Z4E6_9STRA (Ribosomal protein L37 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4E6_9STRA) HSP 1 Score: 157 bits (396), Expect = 3.320e-48 Identity = 72/83 (86.75%), Postives = 81/83 (97.59%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVA 252 TKGT+SFGKRHTKTHTACRRCG+TSFHKQKK C+SCGYPAAKMRRFNW+ KAKRRRT+GTGRMRH+KT+PRRFKNGF+EG+VA Sbjct: 2 TKGTSSFGKRHTKTHTACRRCGKTSFHKQKKTCSSCGYPAAKMRRFNWAAKAKRRRTEGTGRMRHLKTMPRRFKNGFREGTVA 84
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: F0YBC4_AURAN (Ribosomal protein L37 (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YBC4_AURAN) HSP 1 Score: 145 bits (365), Expect = 1.720e-43 Identity = 68/88 (77.27%), Postives = 77/88 (87.50%), Query Frame = 1 Query: 7 KGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATKNGQA 270 KGT+SFGKRH+KTHT CRRCG+ SFH QKKVC+SCGYP AKMRRFNWSEK RRRTQGTGRMR+MK+LPRRFKNGF+EG+ A +A Sbjct: 1 KGTSSFGKRHSKTHTTCRRCGKVSFHIQKKVCSSCGYPGAKMRRFNWSEKGLRRRTQGTGRMRYMKSLPRRFKNGFREGTQAAPKAKA 88
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: A0A7S4A793_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A793_9STRA) HSP 1 Score: 147 bits (371), Expect = 5.680e-43 Identity = 69/84 (82.14%), Postives = 76/84 (90.48%), Query Frame = 1 Query: 1 QTKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVA 252 QTKGT+SFGKRH+KTHT CRRCG+ SFH QKKVCASCGYP AKMRRFNWSEKA RRRT GTGRMRHM+ +PRRFKNGF+EG+ A Sbjct: 109 QTKGTSSFGKRHSKTHTTCRRCGKVSFHLQKKVCASCGYPGAKMRRFNWSEKALRRRTNGTGRMRHMRHMPRRFKNGFREGTQA 192
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: A0A0F7SK53_PHARH (Ribosomal protein L37 n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SK53_PHARH) HSP 1 Score: 141 bits (356), Expect = 3.820e-42 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATKNGQA 270 TKGT+SFGKRHTKTHT CRRCG +FH+QKK CA CGYPAAKMR FNW EKAKRR+T GTGRM+H+K + RRFKNGF+EG+ ATK +A Sbjct: 2 TKGTSSFGKRHTKTHTICRRCGNRAFHRQKKTCAQCGYPAAKMRSFNWGEKAKRRKTTGTGRMQHLKDVSRRFKNGFREGTSATKKVKA 90
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: A0A024GG16_9STRA (Ribosomal protein L37 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GG16_9STRA) HSP 1 Score: 140 bits (352), Expect = 1.600e-41 Identity = 66/89 (74.16%), Postives = 76/89 (85.39%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATKNGQA 270 TKGT SFGKRH KTHT CRRCG++S+H QK CASCGYPAAKMRR+NWSEKA RRRTQGTGRMR++KT+ RRFK+GF+EG+VA A Sbjct: 2 TKGTTSFGKRHNKTHTQCRRCGKSSYHIQKSTCASCGYPAAKMRRYNWSEKALRRRTQGTGRMRYLKTVSRRFKHGFREGTVAVSKKSA 90
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: K8YX48_NANGC (Ribosomal protein L37 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YX48_NANGC) HSP 1 Score: 140 bits (352), Expect = 1.750e-41 Identity = 64/83 (77.11%), Postives = 74/83 (89.16%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVA 252 TKGT+SFGKRHTKTHT CRRCGR +FHKQKK C SCG+P AK+R+FNWSEKAKRR+T GTGR H+K+LPRRFKNGF+EG+ A Sbjct: 2 TKGTSSFGKRHTKTHTGCRRCGRITFHKQKKACGSCGFPEAKIRKFNWSEKAKRRKTTGTGRTAHLKSLPRRFKNGFREGTSA 84
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: K3W545_GLOUD (Ribosomal protein L37 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3W545_GLOUD) HSP 1 Score: 140 bits (352), Expect = 1.860e-41 Identity = 65/90 (72.22%), Postives = 78/90 (86.67%), Query Frame = 1 Query: 1 QTKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATKNGQA 270 +TKGT SFGKRH KTHT CRRCGR+S+H QK VC+SCGYPAAKMR+FNWS+KA RRRTQGTGRM+++KT+ R+FKNGF+EG+VA A Sbjct: 6 RTKGTQSFGKRHNKTHTICRRCGRSSYHVQKSVCSSCGYPAAKMRKFNWSQKALRRRTQGTGRMKYLKTVSRKFKNGFREGTVAVSKKAA 95
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: A0A077WXY2_9FUNG (Ribosomal protein L37 n=6 Tax=Lichtheimia TaxID=688353 RepID=A0A077WXY2_9FUNG) HSP 1 Score: 139 bits (351), Expect = 2.900e-41 Identity = 67/85 (78.82%), Postives = 73/85 (85.88%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATK 258 TKGT SFGKR TK+HT CRRCG+ SFHKQKK CASCGYPAAKMRRFNWSEKAKRRRT GTGRM H+K + RRF NGF+EG+ A K Sbjct: 10 TKGTTSFGKRQTKSHTLCRRCGKRSFHKQKKTCASCGYPAAKMRRFNWSEKAKRRRTTGTGRMSHLKKVHRRFTNGFREGTQAKK 94
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Match: F4RMW3_MELLP (Ribosomal protein L37 n=1 Tax=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) TaxID=747676 RepID=F4RMW3_MELLP) HSP 1 Score: 138 bits (348), Expect = 6.930e-41 Identity = 64/85 (75.29%), Postives = 75/85 (88.24%), Query Frame = 1 Query: 4 TKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSEKAKRRRTQGTGRMRHMKTLPRRFKNGFQEGSVATK 258 TKGT+SFGKRH+KTHT+CRRCGR SFHKQKK CA+CGYPAAK R + W EKAKRR T GTGRMR++KT+ RRFKNGF+EG+VA + Sbjct: 2 TKGTSSFGKRHSKTHTSCRRCGRRSFHKQKKTCAACGYPAAKTRSYEWGEKAKRRHTTGTGRMRYLKTVSRRFKNGFREGTVAKR 86 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig135.2683.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig135.2683.1 >prot_L-elsbetiae_contig135.2683.1 ID=prot_L-elsbetiae_contig135.2683.1|Name=mRNA_L-elsbetiae_contig135.2683.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=91bp QTKGTASFGKRHTKTHTACRRCGRTSFHKQKKVCASCGYPAAKMRRFNWSback to top mRNA from alignment at L-elsbetiae_contig135:51029..52082+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig135.2683.1 ID=mRNA_L-elsbetiae_contig135.2683.1|Name=mRNA_L-elsbetiae_contig135.2683.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1054bp|location=Sequence derived from alignment at L-elsbetiae_contig135:51029..52082+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig135:51029..52082+ >mRNA_L-elsbetiae_contig135.2683.1 ID=mRNA_L-elsbetiae_contig135.2683.1|Name=mRNA_L-elsbetiae_contig135.2683.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=546bp|location=Sequence derived from alignment at L-elsbetiae_contig135:51029..52082+ (Laminarionema elsbetiae ELsaHSoW15)back to top |