prot_L-elsbetiae_contig10218.265.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig10218.265.1
Unique Nameprot_L-elsbetiae_contig10218.265.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length167
Homology
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BLAST of mRNA_L-elsbetiae_contig10218.265.1 vs. uniprot
Match: A0A6H5KR82_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE)

HSP 1 Score: 89.4 bits (220), Expect = 1.350e-17
Identity = 77/164 (46.95%), Postives = 91/164 (55.49%), Query Frame = 0 
Query:    7 CRRSCSGGALSALSGYPQPMS-PSSNSAQGRASPTSSFGGMVSSVGRAGFVGAGXXXXXRA-TGLPLSPASSVHSGFGXXXXXXXXGGISPVSS-LSNSPANSPFRRADSLTRRSQTPPPMTRRAATNSYGYAHGGG--AAASVSLGAGRLSPGSQTPPRRATA 165
            CRRS SGG LSAL G+  P++ P+ + A+G A           S+GR   +G G         GL LSPASS HS  G           SP SS L+NSPA+SPFRRAD+L+RRSQTPP    R               A A+VSLG GR SP SQ+PPRRATA
Sbjct:  910 CRRSSSGGTLSALLGHLDPLTLPNGDRARGLA---------AGSMGRPASLGHGSLGVSTGGDGLVLSPASSAHSNNGFAS--------SPASSSLNNSPASSPFRRADALSRRSQTPPLTGSRIGRGGXXXXXXXXXXAGAAVSLGVGRSSPDSQSPPRRATA 1056
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig10218.265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR82_9PHAE1.350e-1746.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig10218contigL-elsbetiae_contig10218:3473..3973 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig10218.265.1mRNA_L-elsbetiae_contig10218.265.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig10218 3473..3975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig10218.265.1 ID=prot_L-elsbetiae_contig10218.265.1|Name=mRNA_L-elsbetiae_contig10218.265.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=167bp
DVRPGLCRRSCSGGALSALSGYPQPMSPSSNSAQGRASPTSSFGGMVSSV
GRAGFVGAGAGAGARATGLPLSPASSVHSGFGGGGGGGHGGGISPVSSLS
NSPANSPFRRADSLTRRSQTPPPMTRRAATNSYGYAHGGGAAASVSLGAG
RLSPGSQTPPRRATASF
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