prot_L-elsbetiae_contig13443.2650.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13443.2650.1
Unique Nameprot_L-elsbetiae_contig13443.2650.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length153
Homology
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BLAST of mRNA_L-elsbetiae_contig13443.2650.1 vs. uniprot
Match: A0A6H5KQ23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ23_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 3.620e-17
Identity = 63/110 (57.27%), Postives = 73/110 (66.36%), Query Frame = 0 
Query:    1 MFKRRSSKGDVSAKIGYDHVNGKAPSRNGSISSVGGGL----QSVAPVANIVAG----HQKQSSFS-SASSYRKTTGMPSPEGDSGGAPDTISNSNGTSPLAALKPLPPS 101
            MF+RRSSK ++SAKIGYDHVNGKA S+N S+SS+         +VAPVA+I       H KQ S S  +SS RKTTGMPSPE DSG  P         SPLAALKPLPP+
Sbjct:    1 MFRRRSSK-ELSAKIGYDHVNGKA-SKNTSVSSMSSSTPAASNAVAPVASIPPPGGHLHHKQGSCSPGSSSSRKTTGMPSPEADSGVDPSATER---PSPLAALKPLPPA 105
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13443.2650.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQ23_9PHAE3.620e-1757.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13443contigL-elsbetiae_contig13443:4190..4648 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13443.2650.1mRNA_L-elsbetiae_contig13443.2650.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13443 3943..4881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13443.2650.1 ID=prot_L-elsbetiae_contig13443.2650.1|Name=mRNA_L-elsbetiae_contig13443.2650.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=153bp
MFKRRSSKGDVSAKIGYDHVNGKAPSRNGSISSVGGGLQSVAPVANIVAG
HQKQSSFSSASSYRKTTGMPSPEGDSGGAPDTISNSNGTSPLAALKPLPP
SAQQQQQQQQQQQQQQQQQRGRRPSRRQAPPRRPASPSRHPRRWPSLLPR
AW*
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