prot_L-elsbetiae_contig1343.2644.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1343.2644.1
Unique Nameprot_L-elsbetiae_contig1343.2644.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length284
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1343.2644.1 vs. uniprot
Match: A0A6H5JHQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ0_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 1.570e-86
Identity = 163/246 (66.26%), Postives = 177/246 (71.95%), Query Frame = 0 
Query:    1 MHMVDVSVQGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKE-----LSQVKDKEDYGSFEGYEDGAGMYVQYAVGTQQGAAKAPPHTSSASNIADLDIVMGSQFPEGSGAGGG----AGGERYQPLGYQGHHTKRSLTPSMNYNQISAGWSDFAEAIDCKNVGGVDGDGFGSFGXXXXXXXXXXXXXXXXXXXXGLRGWGLEPPDSVLGGFSALSGGEGGGYHSGVLKHARSAGSLATAGEG 237
            MHM DV V GLDLPINTFSCTVGLKLSQANYYIKSS AAAALCKE     LSQVKDKEDYGSFEGYEDGAG+YVQYAV  QQGAAKAPPHTSSASNIADLDIVMGSQFP+G+         A G+R+QP+GYQG   KRSLTPSMNYNQ+S  WSDFAEAID K+V     DG G F                     GL  W  +PPDSV  GF+ LSGG G GY  G +KHARSAGS++T+  G
Sbjct: 1207 MHMGDVGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKEAIVGPLSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPDGNSGXXXXXXXATGDRFQPMGYQGRSAKRSLTPSMNYNQVSTAWSDFAEAIDAKHVD----DGAGGFSDLVSGAAGGNGQFGGGRG--GLNDWDFDPPDSVPAGFTTLSGG-GSGYRPGTMKHARSAGSISTSALG 1445
[Close]
BLAST of mRNA_L-elsbetiae_contig1343.2644.1 vs. uniprot
Match: D7G2K1_ECTSI (Alpha,alpha-trehalose-phosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2K1_ECTSI)

HSP 1 Score: 231 bits (590), Expect = 5.510e-67
Identity = 117/147 (79.59%), Postives = 125/147 (85.03%), Query Frame = 0 
Query:    1 MHMVDVSVQGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELSQVKDKEDYGSFEGYEDGAGMYVQYAVGTQQGAAKAPPHTSSASNIADLDIVMGSQFPEGSGAGGG-----AGGERYQPLGYQGHHTKRSLTPSMNYNQIS 142
            MHM D+ V GLDLPINTFSCTVGLKLSQANYYIKSS AAAALCKELSQVKDKEDYGSFEGYEDGAG+YVQYAV  QQGAAKAPPHTSSASNIADLDIVMGSQFP+G+          A G+R+QP+GY G   KRSLTPSMNYNQ +
Sbjct:  631 MHMGDIGVNGLDLPINTFSCTVGLKLSQANYYIKSSAAAAALCKELSQVKDKEDYGSFEGYEDGAGVYVQYAVANQQGAAKAPPHTSSASNIADLDIVMGSQFPDGNSGXXXXXXXXATGDRFQPMGYLGRSAKRSLTPSMNYNQYT 777
[Close]
BLAST of mRNA_L-elsbetiae_contig1343.2644.1 vs. uniprot
Match: A0A836CNA9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNA9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.220e-7
Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 0 
Query:    8 VQGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELS 47
            ++GLDLPINTFSCTVGLK+SQA YYIKS  A  AL K+LS
Sbjct:  359 LRGLDLPINTFSCTVGLKVSQAQYYIKSRQAVGALLKDLS 398
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1343.2644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JHQ0_9PHAE1.570e-8666.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2K1_ECTSI5.510e-6779.59Alpha,alpha-trehalose-phosphate synthase n=1 Tax=E... [more]
A0A836CNA9_9STRA1.220e-775.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1343contigL-elsbetiae_contig1343:7608..12656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1343.2644.1mRNA_L-elsbetiae_contig1343.2644.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1343 7572..12667 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1343.2644.1 ID=prot_L-elsbetiae_contig1343.2644.1|Name=mRNA_L-elsbetiae_contig1343.2644.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=284bp
MHMVDVSVQGLDLPINTFSCTVGLKLSQANYYIKSSLAAAALCKELSQVK
DKEDYGSFEGYEDGAGMYVQYAVGTQQGAAKAPPHTSSASNIADLDIVMG
SQFPEGSGAGGGAGGERYQPLGYQGHHTKRSLTPSMNYNQISAGWSDFAE
AIDCKNVGGVDGDGFGSFGGGGGGGGGGKTEAGGGGGGGGLRGWGLEPPD
SVLGGFSALSGGEGGGYHSGVLKHARSAGSLATAGEGAGEALKQGLPRRA
SGIRQQAATAAAVAAAAEERDSEGERQKQKQRN*
back to top