prot_L-elsbetiae_contig13427.2641.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13427.2641.1
Unique Nameprot_L-elsbetiae_contig13427.2641.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length351
Homology
BLAST of mRNA_L-elsbetiae_contig13427.2641.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.360e-94
Identity = 179/345 (51.88%), Postives = 221/345 (64.06%), Query Frame = 0
Query:    1 ERGGNRDLADTVSDYTMAIVGHVSGMYKAIIKAPRAASNQASYSISSQLLAELIRPRDGREHVLDDDSCSLLLDILVNSSANPHVVRPALLMLTEIANTYQPTTGTAVAVAAGEARGAAGEAKSXXXXXXXXXXXXXXXXDGGKDATAVALDPDREPSTPACCWFHERCGASTKARSPPSSAPAFHAQACLRAWKSVCSCIARLGKMLLYGLQGQQEGEHGEVLYDREGALFDALWELLLRFLVPFASEAASFL--QKAPKAGESPTRAILKGWVGADDEFTSLWAGLGQALSVVEGVVGGTEPDRFGALLRGYLVYLHLTNESWDHYTDILKVVKDNKVETGLA 343
            + GGN D+AD +SDYTM+++ HVS MYKA++K PR+A      S +S+LL ELIRPRDG    +DD SC +LL+I+VNS+ANP VVRP +L+LTE+AN   P+ G +V                                D G  +   +  P  +     CC  H       K  + P + P FH+Q CL  W++VC+CIARLG+MLLYGLQGQQEG+HGEVLY+REG LFD LWEL+ RFLVP A E A FL    A K G+SPT +ILK    A   F SLW GL +ALSVVEG VG +EPDRFGALLRGYL YLHL +ES +HY  I+KVVKDN V+TGLA
Sbjct:  490 QAGGNADVADDLSDYTMSVLTHVSAMYKAVLKLPRSALQGPQQSTTSRLLVELIRPRDGLPRAVDDISCLVLLEIVVNSTANPQVVRPLVLLLTEVANAPLPS-GFSV--------------------------------DAGSASMIESSLPKWDSRVAPCCVLHR------KEPTVPRNGPGFHSQTCLVVWQNVCACIARLGRMLLYGLQGQQEGKHGEVLYEREGQLFDNLWELVFRFLVPHADEVACFLADHNAVK-GKSPTSSILK---IAGSAFPSLWTGLSEALSVVEGEVGSSEPDRFGALLRGYLAYLHLADESEEHYKAIVKVVKDNGVDTGLA 791          
BLAST of mRNA_L-elsbetiae_contig13427.2641.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 210 bits (534), Expect = 4.810e-57
Identity = 109/157 (69.43%), Postives = 125/157 (79.62%), Query Frame = 0
Query:  188 QACLRAWKSVCSCIARLGKMLLYGLQGQQEGEHGEVLYDREGALFDALWELLLRFLVPFASEAASFLQKAPKA-GESPTRAILKGWVGADDEFTSLWAGLGQALSVVEGVVGGTEPDRFGALLRGYLVYLHLTNESWDHYTDILKVVKDNKVETGLA 343
            +ACL  W++VC+CIARLGKMLLYGLQGQQEGEHGEVLY+REG LFD LWEL+ RFLVP A E A FL       G+SPT +ILK  VG+   F SLW GL +ALSVVEG VGGTEPDRFGALLRGYL YLHL ++S +HY  I+KVVK+N V+TGLA
Sbjct:  396 EACLDVWQNVCTCIARLGKMLLYGLQGQQEGEHGEVLYEREGLLFDNLWELVFRFLVPHADEVACFLADHDAGKGKSPTSSILK-VVGS--AFPSLWTGLSEALSVVEGDVGGTEPDRFGALLRGYLAYLHLADDSEEHYKAIVKVVKENGVDTGLA 549          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13427.2641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JX10_9PHAE1.360e-9451.88HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LKA6_ECTSI4.810e-5769.43HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13427contigL-elsbetiae_contig13427:209..3743 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13427.2641.1mRNA_L-elsbetiae_contig13427.2641.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13427 209..3744 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13427.2641.1 ID=prot_L-elsbetiae_contig13427.2641.1|Name=mRNA_L-elsbetiae_contig13427.2641.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
ERGGNRDLADTVSDYTMAIVGHVSGMYKAIIKAPRAASNQASYSISSQLL
AELIRPRDGREHVLDDDSCSLLLDILVNSSANPHVVRPALLMLTEIANTY
QPTTGTAVAVAAGEARGAAGEAKSGTAVEAAAEKTAGGAGDGGKDATAVA
LDPDREPSTPACCWFHERCGASTKARSPPSSAPAFHAQACLRAWKSVCSC
IARLGKMLLYGLQGQQEGEHGEVLYDREGALFDALWELLLRFLVPFASEA
ASFLQKAPKAGESPTRAILKGWVGADDEFTSLWAGLGQALSVVEGVVGGT
EPDRFGALLRGYLVYLHLTNESWDHYTDILKVVKDNKVETGLAGGAAVMG
A
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