mRNA_L-elsbetiae_contig13425.2640.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5K4S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S4_9PHAE) HSP 1 Score: 362 bits (930), Expect = 3.220e-124 Identity = 176/215 (81.86%), Postives = 190/215 (88.37%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNRGGEARQQALDDAA +GGAAGNRVG RRRCCIRKVFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD Sbjct: 33 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 247
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE) HSP 1 Score: 360 bits (924), Expect = 2.020e-120 Identity = 174/215 (80.93%), Postives = 189/215 (87.91%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNRGGEARQQALDDAA +GGAAGNRVG RRRCCIRKVFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGY KH++RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD Sbjct: 240 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 454
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE) HSP 1 Score: 362 bits (930), Expect = 1.310e-116 Identity = 176/215 (81.86%), Postives = 190/215 (88.37%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNRGGEARQQALDDAA +GGAAGNRVG RRRCCIRKVFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD Sbjct: 673 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 887
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE) HSP 1 Score: 356 bits (913), Expect = 1.740e-111 Identity = 174/215 (80.93%), Postives = 187/215 (86.98%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQ-----------------GGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 GQAKGGQQ+LMEMGLWDVPGE PVRV ECK CK ERAATRAAIT+FNRGGE RQQALDDAA+ GGAAGN VGTR RCCI +VFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL+C+YSL HMLKILPGALSGVPL F+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD Sbjct: 1082 GQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 1296
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5KDG4_9PHAE (Uncharacterized protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG4_9PHAE) HSP 1 Score: 354 bits (908), Expect = 1.940e-110 Identity = 171/215 (79.53%), Postives = 187/215 (86.98%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNR GEARQQALDDAA +GGAAGNRVG RR CCIRK FAELKAFK +LNK+EK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD Sbjct: 1052 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRVGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRHCCIRKAFAELKAFKVKLNKVEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 1266
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5JDL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL9_9PHAE) HSP 1 Score: 277 bits (709), Expect = 2.210e-90 Identity = 136/210 (64.76%), Postives = 159/210 (75.71%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNRVGT------------RRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 G KGG+QLLMEMGLW+ GE +RVHEC C+AE+AATR AITAFNRGGE RQQ +D+ QG G G RRRCC+ +V +ELKAF+ ELN +EKLFK GH+C+FL KYHPELNAIERYWGY+KHL+RL+ +YSL HML++LPGALSGVP FIR WSRVTWLY+EAYDEGL DYLE RD+K+W HR T RGD Sbjct: 66 GLPKGGKQLLMEMGLWE--GEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDGXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHWEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 273
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5LC28_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC28_9PHAE) HSP 1 Score: 275 bits (702), Expect = 1.320e-89 Identity = 134/210 (63.81%), Postives = 158/210 (75.24%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNR------------VGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 G +KGG+QLLM+MGLW GE +RV EC C+AE+AATR AITAFNRGGE RQQ +D+ QG G RRRCC+ +V +ELKAF+ ELN +EKLFK GH+C+FL KYHPELNAIERYWGY+KHL+RL+C+YSL HML++LPGALSGVP FIR WSRVTWLY+EAYDEGL DYLE RD+K+W HR T RGD Sbjct: 25 GLSKGGKQLLMKMGLWK--GEPTLRVQECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 232
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE) HSP 1 Score: 272 bits (696), Expect = 5.650e-89 Identity = 134/210 (63.81%), Postives = 157/210 (74.76%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNR------------VGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 G K G+QLLMEMGLW+ GE +RVHEC C+AE+AATR AITA NRGGE RQQ +D+ QG G RRRCC+ +V +ELKAF+ ELN +EKLFK GH+C+FL KYHPELNAIERYWGY+KHL+RL+C+YSL HML++LPGALSGVP FIR WSRVTWLY+EAYDEGL DYLE RD+K+W HR T RGD Sbjct: 25 GLPKRGKQLLMEMGLWE--GEPTLRVHECSACRAEKAATRQAITASNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 232
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE) HSP 1 Score: 265 bits (677), Expect = 1.720e-87 Identity = 130/201 (64.68%), Postives = 151/201 (75.12%), Query Frame = 1 Query: 31 MEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQG-------------GAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 MEMGLW+ GE RVHEC+ C+AE+AATR AITAFNRGGE RQ +D QG GAAG G RRRCC+ +V +ELKAF+ ELN +E LFK GH+C+FL KYHPELNAIERYWGY+KHL+RL+C+YSL HML++LPGALSGVP FIR WSRVTWLY+EAYDEGL DYLE D+K+W HR T RGD Sbjct: 1 MEMGLWE--GEPTPRVHECRACRAEKAATRQAITAFNRGGEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGE-AGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGD 198
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE) HSP 1 Score: 278 bits (712), Expect = 5.580e-86 Identity = 135/210 (64.29%), Postives = 159/210 (75.71%), Query Frame = 1 Query: 1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNR------------VGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594 G KGG+QLLMEMGLW+ GE +RVHEC C+AE+AATR AITAFNRGGE RQQ +D+ QG G RRRCC+ +V +ELKAF+ ELN +EKLFK GH+C+FL KYHPELN+IERYWGY+KHL+RL+C+YSL HML++LPGALSGVP FIR WSRVTWLY+EAYDEGL DYLE RD+K+W HR T RGD Sbjct: 513 GLPKGGKQLLMEMGLWE--GEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 720 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13425.2640.1 >prot_L-elsbetiae_contig13425.2640.1 ID=prot_L-elsbetiae_contig13425.2640.1|Name=mRNA_L-elsbetiae_contig13425.2640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp MEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAback to top mRNA from alignment at L-elsbetiae_contig13425:294..938- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13425.2640.1 ID=mRNA_L-elsbetiae_contig13425.2640.1|Name=mRNA_L-elsbetiae_contig13425.2640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=645bp|location=Sequence derived from alignment at L-elsbetiae_contig13425:294..938- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13425:294..938- >mRNA_L-elsbetiae_contig13425.2640.1 ID=mRNA_L-elsbetiae_contig13425.2640.1|Name=mRNA_L-elsbetiae_contig13425.2640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig13425:294..938- (Laminarionema elsbetiae ELsaHSoW15)back to top |