mRNA_L-elsbetiae_contig13425.2640.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13425.2640.1
Unique NamemRNA_L-elsbetiae_contig13425.2640.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5K4S4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S4_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 3.220e-124
Identity = 176/215 (81.86%), Postives = 190/215 (88.37%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNRGGEARQQALDDAA                 +GGAAGNRVG RRRCCIRKVFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD
Sbjct:   33 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 247          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5JT56_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT56_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 2.020e-120
Identity = 174/215 (80.93%), Postives = 189/215 (87.91%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNRGGEARQQALDDAA                 +GGAAGNRVG RRRCCIRKVFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGY KH++RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD
Sbjct:  240 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYAKHILRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 454          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5K659_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K659_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.310e-116
Identity = 176/215 (81.86%), Postives = 190/215 (88.37%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNRGGEARQQALDDAA                 +GGAAGNRVG RRRCCIRKVFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD
Sbjct:  673 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRGGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRRCCIRKVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 887          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5JJ42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ42_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 1.740e-111
Identity = 174/215 (80.93%), Postives = 187/215 (86.98%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQ-----------------GGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            GQAKGGQQ+LMEMGLWDVPGE PVRV ECK CK ERAATRAAIT+FNRGGE RQQALDDAA+                 GGAAGN VGTR RCCI +VFAELKAFK ELNKIEK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL+C+YSL HMLKILPGALSGVPL F+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD
Sbjct: 1082 GQAKGGQQMLMEMGLWDVPGEDPVRVLECKACKGERAATRAAITSFNRGGEGRQQALDDAARRDETDGESAGSPGEGAAGGAAGNHVGTRSRCCIGRVFAELKAFKMELNKIEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLHCEYSLKHMLKILPGALSGVPLRFMRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 1296          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5KDG4_9PHAE (Uncharacterized protein n=6 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDG4_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 1.940e-110
Identity = 171/215 (79.53%), Postives = 187/215 (86.98%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAA-----------------QGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            GQAKGGQQLLMEMGLWDVPG++P+RV ECK CK ER A +AAITAFNR GEARQQALDDAA                 +GGAAGNRVG RR CCIRK FAELKAFK +LNK+EK+FKKAGH+C+FLAKYHPELNAIERYWGYVKHL+RL C+YSLPHML+ILPGALSGVPLGF+RGWSRVTWLYLEAYDEGLVDYLEVRD+KKWLSHRSPT+RGD
Sbjct: 1052 GQAKGGQQLLMEMGLWDVPGQAPIRVLECKACKEERKAIKAAITAFNRVGEARQQALDDAAREDQDGGGDGASPEEGTEGGAAGNRVGMRRHCCIRKAFAELKAFKVKLNKVEKMFKKAGHICIFLAKYHPELNAIERYWGYVKHLLRLSCEYSLPHMLEILPGALSGVPLGFVRGWSRVTWLYLEAYDEGLVDYLEVRDLKKWLSHRSPTERGD 1266          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5JDL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL9_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 2.210e-90
Identity = 136/210 (64.76%), Postives = 159/210 (75.71%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNRVGT------------RRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            G  KGG+QLLMEMGLW+  GE  +RVHEC  C+AE+AATR AITAFNRGGE RQQ +D+  QG   G   G             RRRCC+ +V +ELKAF+ ELN +EKLFK  GH+C+FL KYHPELNAIERYWGY+KHL+RL+ +YSL HML++LPGALSGVP  FIR WSRVTWLY+EAYDEGL DYLE RD+K+W  HR  T RGD
Sbjct:   66 GLPKGGKQLLMEMGLWE--GEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDGXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHWEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 273          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5LC28_9PHAE (Uncharacterized protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC28_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 1.320e-89
Identity = 134/210 (63.81%), Postives = 158/210 (75.24%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNR------------VGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            G +KGG+QLLM+MGLW   GE  +RV EC  C+AE+AATR AITAFNRGGE RQQ +D+  QG   G                 RRRCC+ +V +ELKAF+ ELN +EKLFK  GH+C+FL KYHPELNAIERYWGY+KHL+RL+C+YSL HML++LPGALSGVP  FIR WSRVTWLY+EAYDEGL DYLE RD+K+W  HR  T RGD
Sbjct:   25 GLSKGGKQLLMKMGLWK--GEPTLRVQECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 232          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5KWI8_9PHAE (Uncharacterized protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWI8_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 5.650e-89
Identity = 134/210 (63.81%), Postives = 157/210 (74.76%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNR------------VGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            G  K G+QLLMEMGLW+  GE  +RVHEC  C+AE+AATR AITA NRGGE RQQ +D+  QG   G                 RRRCC+ +V +ELKAF+ ELN +EKLFK  GH+C+FL KYHPELNAIERYWGY+KHL+RL+C+YSL HML++LPGALSGVP  FIR WSRVTWLY+EAYDEGL DYLE RD+K+W  HR  T RGD
Sbjct:   25 GLPKRGKQLLMEMGLWE--GEPTLRVHECSACRAEKAATRQAITASNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRVWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 232          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5KKI5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI5_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.720e-87
Identity = 130/201 (64.68%), Postives = 151/201 (75.12%), Query Frame = 1
Query:   31 MEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQG-------------GAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            MEMGLW+  GE   RVHEC+ C+AE+AATR AITAFNRGGE RQ  +D   QG             GAAG   G RRRCC+ +V +ELKAF+ ELN +E LFK  GH+C+FL KYHPELNAIERYWGY+KHL+RL+C+YSL HML++LPGALSGVP  FIR WSRVTWLY+EAYDEGL DYLE  D+K+W  HR  T RGD
Sbjct:    1 MEMGLWE--GEPTPRVHECRACRAEKAATRQAITAFNRGGEGRQHVVDSTGQGKEDGGEDGDSSGSGAAGE-AGKRRRCCVVRVLSELKAFREELNMVENLFKAHGHLCIFLPKYHPELNAIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLECCDLKEWGKHREATARGD 198          
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Match: A0A6H5L669_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L669_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 5.580e-86
Identity = 135/210 (64.29%), Postives = 159/210 (75.71%), Query Frame = 1
Query:    1 GQAKGGQQLLMEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDAAQGGAAGNR------------VGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLAKYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGWSRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD 594
            G  KGG+QLLMEMGLW+  GE  +RVHEC  C+AE+AATR AITAFNRGGE RQQ +D+  QG   G                 RRRCC+ +V +ELKAF+ ELN +EKLFK  GH+C+FL KYHPELN+IERYWGY+KHL+RL+C+YSL HML++LPGALSGVP  FIR WSRVTWLY+EAYDEGL DYLE RD+K+W  HR  T RGD
Sbjct:  513 GLPKGGKQLLMEMGLWE--GEPTLRVHECSACRAEKAATRQAITAFNRGGEGRQQVVDNTGQGEEDGGEDXXXXXXXXXXXXXKRRRCCVVRVLSELKAFREELNMVEKLFKAHGHLCMFLPKYHPELNSIERYWGYIKHLLRLHCEYSLRHMLQVLPGALSGVPARFIRAWSRVTWLYIEAYDEGLEDYLEYRDLKEWGKHREATARGD 720          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13425.2640.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K4S4_9PHAE3.220e-12481.86Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT56_9PHAE2.020e-12080.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K659_9PHAE1.310e-11681.86Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJ42_9PHAE1.740e-11180.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDG4_9PHAE1.940e-11079.53Uncharacterized protein n=6 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDL9_9PHAE2.210e-9064.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LC28_9PHAE1.320e-8963.81Uncharacterized protein n=5 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWI8_9PHAE5.650e-8963.81Uncharacterized protein n=18 Tax=Ectocarpus sp. CC... [more]
A0A6H5KKI5_9PHAE1.720e-8764.68Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L669_9PHAE5.580e-8664.29Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13425contigL-elsbetiae_contig13425:294..938 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score99.8
Seed ortholog evalue1.5e-18
Seed eggNOG ortholog5346.XP_001836270.2
Hectar predicted targeting categoryother localisation
EggNOG OGs22BGZ@155619,29JY0@1,2RT6R@2759,39VBJ@33154,3P12S@4751,3V3WY@5204,3W9QD@5338
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
Exons2
Model size594
Cds size564
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13425.2640.1prot_L-elsbetiae_contig13425.2640.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13425 294..908 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.8710995-CDS-L-elsbetiae_contig13425:293..7031622815513.8710995-CDS-L-elsbetiae_contig13425:293..703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13425 294..703 -
1691682935.7365625-CDS-L-elsbetiae_contig13425:293..7031691682935.7365625-CDS-L-elsbetiae_contig13425:293..703Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13425 294..703 -
1622815513.9928327-CDS-L-elsbetiae_contig13425:754..9081622815513.9928327-CDS-L-elsbetiae_contig13425:754..908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13425 755..908 -
1691682935.7502515-CDS-L-elsbetiae_contig13425:754..9081691682935.7502515-CDS-L-elsbetiae_contig13425:754..908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13425 755..908 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815514.0050805-UTR-L-elsbetiae_contig13425:908..9381622815514.0050805-UTR-L-elsbetiae_contig13425:908..938Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13425 909..938 -
1691682935.7589002-UTR-L-elsbetiae_contig13425:908..9381691682935.7589002-UTR-L-elsbetiae_contig13425:908..938Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13425 909..938 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13425.2640.1

>prot_L-elsbetiae_contig13425.2640.1 ID=prot_L-elsbetiae_contig13425.2640.1|Name=mRNA_L-elsbetiae_contig13425.2640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp
MEMGLWDVPGESPVRVHECKVCKAERAATRAAITAFNRGGEARQQALDDA
AQGGAAGNRVGTRRRCCIRKVFAELKAFKAELNKIEKLFKKAGHVCLFLA
KYHPELNAIERYWGYVKHLIRLYCKYSLPHMLKILPGALSGVPLGFIRGW
SRVTWLYLEAYDEGLVDYLEVRDVKKWLSHRSPTDRGD
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mRNA from alignment at L-elsbetiae_contig13425:294..938-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13425.2640.1 ID=mRNA_L-elsbetiae_contig13425.2640.1|Name=mRNA_L-elsbetiae_contig13425.2640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=645bp|location=Sequence derived from alignment at L-elsbetiae_contig13425:294..938- (Laminarionema elsbetiae ELsaHSoW15)
GGCCAGGCGAAAGGTGGACAGCAGCTGCTCATGGAGATGGGCCTGTGGGA CGTTCCTGGCGAGAGTCCCGTTCGCGTTCACGAGTGCAAAGTGTGCAAAG CGGAAAGGGCGGCAACACGAGCAGCCATAACCGCTTTCAACCGCGGAGGA GAGGCACGGCAGCAGGCGTTGGATGATGCTGCGCGTAGAGACGAGGACGG CGGGGGAGATGGAGGCTCGCCAGGAGAGGGGGCAGAGGGCGGGGCGGCTG GCAACCGTGTCGGCACGAGGCGTCGCTGCTGCATTCGGAAAGTCTTTGCC GAGCTCAAGGCGTTCAAGGCGGAACTCAACAAGATCGAGAAGCTATTCAA AAAAGCCGGGCACGTGTGCCTTTTCTTGGCGAAGTATCACCCAGAGCTCA ACGCCATCGAGCGGTACTGGGGGTACGTCAAGCACCTCATCCGCCTGTAC TGCAAGTACTCTCTTCCGCATATGCTCAAGATTCTACCTGGCGCTTTGAG TGGCGTGCCGTTAGGATTCATCCGGGGGTGGAGCAGGGTGACGTGGCTGT ACCTTGAGGCCTACGACGAGGGACTGGTGGACTACCTTGAGGTCCGCGAC GTCAAGAAGTGGCTGAGCCACCGTTCCCCCACGGACAGGGGGGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13425:294..938-

>mRNA_L-elsbetiae_contig13425.2640.1 ID=mRNA_L-elsbetiae_contig13425.2640.1|Name=mRNA_L-elsbetiae_contig13425.2640.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig13425:294..938- (Laminarionema elsbetiae ELsaHSoW15)
ATGGAGATGGGCCTGTGGGACGTTCCTGGCGAGAGTCCCGTTCGCGTTCA
CGAGTGCAAAGTGTGCAAAGCGGAAAGGGCGGCAACACGAGCAGCCATAA
CCGCTTTCAACCGCGGAGGAGAGGCACGGCAGCAGGCGTTGGATGATGCT
GCGCATGGAGATGGGCCTGTGGGACGTTCCTGGCGAGAGTCCCGTTCGCG
TTCACGAGTGCAAAGTGTGCAAAGCGGAAAGGGCGGCAACACGAGCAGCC
ATAACCGCTTTCAACCGCGGAGGAGAGGCACGGCAGCAGGCGTTGGATGA
TGCTGCGCAGGGCGGGGCGGCTGGCAACCGTGTCGGCACGAGGCGTCGCT
GCTGCATTCGGAAAGTCTTTGCCGAGCTCAAGGCGTTCAAGGCGGAACTC
AACAAGATCGAGAAGCTATTCAAAAAAGCCGGGCACGTGTGCCTTTTCTT
GGCGAAGTATCACCCAGAGCTCAACGCCATCGAGCGGTACTGGGGGTACG
TCAAGCACCTCATCCGCCTGTACTGCAAGTACTCTCTTCCGCATATGCTC
AAGATTCTACCTGGCGCTTTGAGTGGCGTGCCGTTAGGATTCATCCGGGG
GTGGAGCAGGGTGACGTGGCTGTACCTTGAGGCCTACGACGAGGGACTGG
TGGACTACCTTGAGGTCCGCGACGTCAAGAAGTGGCTGAGCCACCGTTCC
CCCACGGACAGGGGGGACAGGGCGGGGCGGCTGGCAACCGTGTCGGCACG
AGGCGTCGCTGCTGCATTCGGAAAGTCTTTGCCGAGCTCAAGGCGTTCAA
GGCGGAACTCAACAAGATCGAGAAGCTATTCAAAAAAGCCGGGCACGTGT
GCCTTTTCTTGGCGAAGTATCACCCAGAGCTCAACGCCATCGAGCGGTAC
TGGGGGTACGTCAAGCACCTCATCCGCCTGTACTGCAAGTACTCTCTTCC
GCATATGCTCAAGATTCTACCTGGCGCTTTGAGTGGCGTGCCGTTAGGAT
TCATCCGGGGGTGGAGCAGGGTGACGTGGCTGTACCTTGAGGCCTACGAC
GAGGGACTGGTGGACTACCTTGAGGTCCGCGACGTCAAGAAGTGGCTGAG
CCACCGTTCCCCCACGGACAGGGGGGAC
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