mRNA_L-elsbetiae_contig13411.2632.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13411.2632.1
Unique NamemRNA_L-elsbetiae_contig13411.2632.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE)

HSP 1 Score: 356 bits (913), Expect = 5.300e-119
Identity = 164/212 (77.36%), Postives = 184/212 (86.79%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKSVCDEANALGLDTILKDYDLKPPFCSCVDPSRDLDCMY 684
            DAGQ VID+LH+KGKGVVCYISIGTVEDWR D  EFP+SAIGG V GWAGEKW+DVND  VRE+M+ARV+ A SM+CDA+EPDNMMVYTEGS TG+ VSEA+QI+YN+WFAD VH  GM VGLKN VELVP+LVNKFDFALNEECH WNEC  Y+ TFLA+GKPV+NVEY+   SVCDEANALGLDTILK YDL   FCSCVDPSRD+DCM+
Sbjct:  173 DAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYTEGSSTGVSVSEAEQIEYNSWFADIVHAYGMGVGLKNAVELVPILVNKFDFALNEECHEWNECNVYEDTFLAEGKPVYNVEYNLGNSVCDEANALGLDTILKSYDLDAAFCSCVDPSRDVDCMH 384          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: D7FRL2_ECTSI (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 2.030e-61
Identity = 110/210 (52.38%), Postives = 137/210 (65.24%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKSVCDEANALGLDTILKDYDLKPPFCSCVDPSRDLDC 678
            D  Q  IDDLH KGK V CYIS+GT E WR D   FP S IG  ++ W  E +LD+    VREVM ARV+ A S +CDA+EP+NM  + +   TG  +S  DQ+ YN WFA  V + GM VG+K++ ELV  L + +DFA+  ECH   ECG Y   FL + KPVFNVEY  +  VCDE+NALG+DTI K+ +L  P CSC D SRD+DC
Sbjct:  524 DNAQDTIDDLHAKGKYVACYISVGTAEPWREDFELFPDSVIGQRMEEWEAESYLDITQESVREVMEARVKKAASTNCDAVEPNNMSNWNQ-ENTGFTISRDDQVAYNIWFALLVRENGMRVGIKDSFELVGDLNSYYDFAI-AECHEEFECGVYTVPFLLKDKPVFNVEYSKDYGVCDESNALGIDTIFKNLELDAPLCSCADSSRDVDC 731          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A1I0KAA5_9DELT (Glyco_hydro_114 domain-containing protein n=3 Tax=Stigmatella TaxID=40 RepID=A0A1I0KAA5_9DELT)

HSP 1 Score: 199 bits (506), Expect = 5.550e-59
Identity = 97/218 (44.50%), Postives = 140/218 (64.22%), Query Frame = 1
Query:    7 NTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGE---KSVCDEANALGLDTILKDYDLKPPFCSC 651
            N AV+   LF    D   + ++ L  +G+ V+CY S G+ E+WRSD G FPA+A+G  +DGW GE+WLD+ + +VR++M  R++ A+   CDA++PDN+  Y   + TG  ++ ADQ+ +N + A E H  G+ VGLKN V  V  LVN FDF +NEEC  ++EC E    F+A GKPVF++EY G    + +C +ANAL  DT++K+ DL  P  SC
Sbjct:   68 NVAVYDVDLF----DTPVSTLNALKAQGRKVICYFSAGSYENWRSDAGSFPAAALGNALDGWPGERWLDIRNTKVRDIMRTRIELARQKGCDAVDPDNVDGYA--NATGFKLTSADQLSFNRFLATEAHARGLAVGLKNDVGQVAQLVNDFDFQVNEECFQYDECEELLP-FIAAGKPVFSIEYGGNALAQQICPQANALNFDTLVKNLDLDAPRISC 278          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT)

HSP 1 Score: 191 bits (484), Expect = 4.900e-55
Identity = 98/198 (49.49%), Postives = 127/198 (64.14%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS----VCDEANALGLDTILKDYDL 630
            DA QAVID L  +G  V+CY S G+ EDWR D G+FP +A+G  +DGW GE+WLD+  P VR +M AR+  A +  CD +EPDN+  Y   SG  L  + A Q+DYN + A E H  G+ VGLKN +E V  L+  FD+AL+EEC  W+EC +  + F+A GK VF VEY G+ S    VC  ANAL  DT++K  DL
Sbjct:  131 DAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYANDSGFPL--TAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALDEECFQWDEC-DLLRPFVAAGKAVFQVEY-GDASLAADVCPRANALDFDTLIKRLDL 324          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A5C8AXX1_9BURK (Glyco_hydro_114 domain-containing protein n=1 Tax=Aquabacterium sp. TaxID=1872578 RepID=A0A5C8AXX1_9BURK)

HSP 1 Score: 188 bits (477), Expect = 5.920e-55
Identity = 96/201 (47.76%), Postives = 126/201 (62.69%), Query Frame = 1
Query:    1 TQNTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600
            T N  V+   LF    D     I +L  +G+ VVCY S G+ EDWR+D G FP SA+G  + GW GE+WLD+ +PQVRE+M+ R+Q AKS  CDA+EPDN+  Y+  +G GL  + ADQIDYN W + + H   + + LKN VELVP LVN FDF +NE C+ + EC  Y+  F  QGK VF  EY    S +C +A + G
Sbjct:   43 TPNRLVYDIDLF----DNSATTISNLKSQGRIVVCYFSAGSWEDWRADAGLFPQSALGAELSGWPGERWLDIRNPQVRELMARRMQLAKSKGCDALEPDNIDGYSNSNGLGL--TAADQIDYNRWLSQQAHALDLAIALKNAVELVPELVNDFDFVINESCYAYKECDIYR-LFRQQGKAVFIAEYRSYSSNMCSKAASAG 236          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE)

HSP 1 Score: 185 bits (469), Expect = 4.840e-54
Identity = 96/204 (47.06%), Postives = 124/204 (60.78%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEY---DGEKSVCDEANALGLDTILKDYDLKPPFCSC 651
            +A QA ID L   GK V+CY S G+ EDWRSD   FPA+A+G  +DGW GE+WLD     VR+VM AR+  A    CD +EPDN+  YT GSG  L  + A Q+DYN + A E H  G+ +GLKN ++ V  LV  FD+ALNEECH ++EC E    F+  GK VF+ EY       +VC +   LGL T++K  DL     +C
Sbjct:   31 EAPQATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYTNGSGFPL--TAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDEC-EMLTPFIRAGKAVFHAEYVAASQANAVCADTKPLGLSTLIKRLDLDAWRVAC 231          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A1G3E0C0_9GAMM (Glyco_hydro_114 domain-containing protein n=1 Tax=Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 TaxID=1802005 RepID=A0A1G3E0C0_9GAMM)

HSP 1 Score: 184 bits (468), Expect = 6.060e-54
Identity = 88/185 (47.57%), Postives = 120/185 (64.86%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600
            D     I +L  +G+ VVCY S G+ EDWRSD  ++P  A+G  +DGW GE+WLD+  P VR +M+ R++ A    CDA+EPDN+  Y+ G+G GL  SEA+QIDYN W + + H+  + + LKN VEL+P LV+ FDFALNE C+ + EC  Y+  F  QGK VF  EY    S +C +A+A G
Sbjct:   29 DTSTTTITNLKGQGRIVVCYFSAGSWEDWRSDAAQYPKEALGAQLDGWPGERWLDIRHPAVRTLMAKRIRLAAEKGCDAVEPDNVDGYSNGNGLGL--SEANQIDYNRWLSQQAHEHNLAIALKNAVELIPALVDDFDFALNESCYAYKECEAYR-LFRQQGKAVFIAEYRSYNSNMCSKASASG 210          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: Q098C2_STIAD (Endo alpha-1,4 polygalactosaminidase precusor n=2 Tax=Stigmatella aurantiaca TaxID=41 RepID=Q098C2_STIAD)

HSP 1 Score: 187 bits (475), Expect = 6.780e-54
Identity = 93/218 (42.66%), Postives = 136/218 (62.39%), Query Frame = 1
Query:    7 NTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGE---KSVCDEANALGLDTILKDYDLKPPFCSC 651
            N  V+   LF    D   A +  L  +G+ V+CY S G+ EDWR D   FP++ +G  +DGW GE+WLD+    VR++M +R++ A+   CDA++PDN+  Y+  + TG  ++ ADQ+ +N + A E H  G+ VGLKN V+ V  LVN FDF +NEEC  ++EC +  + F+  GK VF++EY G    +SVC EANALG DT++K+ +L     SC
Sbjct:  104 NVPVYDVDLF----DTPTATLTALKSQGRKVICYFSAGSYEDWRPDAKSFPSAVLGKALDGWPGERWLDIRATSVRDIMRSRIELARQKGCDAVDPDNVDGYS--NNTGFRLTSADQLAFNRFLASEAHSRGLAVGLKNDVDQVTQLVNDFDFQVNEECLQYDEC-DTLRPFITAGKAVFHIEYGGAALAQSVCPEANALGFDTLVKNLELDAARISC 314          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A1H7R5T2_9GAMM (Glyco_hydro_114 domain-containing protein n=2 Tax=Atopomonas hussainii TaxID=1429083 RepID=A0A1H7R5T2_9GAMM)

HSP 1 Score: 185 bits (469), Expect = 1.050e-53
Identity = 89/185 (48.11%), Postives = 122/185 (65.95%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600
            D   + I +L  +G+ VVCY S G+ EDWR D  ++P SA+G  + GW GE+WLD+ +PQVR +++ R+  A S  C A+EPDN+  Y+  +G GL  SEADQ+D+N W AD+ H   + + LKN VEL+P LVN FDFALNE C+ +NECG Y   F AQGK VF  EY    + +C++A + G
Sbjct:   59 DTPASTIANLKAQGRIVVCYFSAGSWEDWRDDAAQYPQSALGNNLSGWPGERWLDIRNPQVRTLLAKRLDLAASKGCHAVEPDNIDGYSNDNGLGL--SEADQVDFNRWLADQAHARQLGIALKNAVELIPQLVNHFDFALNESCYRYNECGGYS-AFTAQGKAVFIAEYRKYSTKLCNKAASSG 240          
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A654BBT4_9PSED (Glyco_hydro_114 domain-containing protein n=4 Tax=Pseudomonas TaxID=286 RepID=A0A654BBT4_9PSED)

HSP 1 Score: 184 bits (468), Expect = 1.320e-53
Identity = 88/185 (47.57%), Postives = 120/185 (64.86%), Query Frame = 1
Query:   49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600
            D     I +L  +G+ VVCY S G+ EDWRSD  ++P  A+G  +DGW GE+WLD+  P VR +M+ R++ A    CDA+EPDN+  Y+ G+G GL  SEA+QIDYN W + + H+  + + LKN VEL+P LV+ FDFALNE C+ + EC  Y+  F  QGK VF  EY    S +C +A+A G
Sbjct:   55 DTSTTTITNLKGQGRIVVCYFSAGSWEDWRSDAAQYPKEALGAQLDGWPGERWLDIRHPAVRTLMAKRIRLAAEKGCDAVEPDNVDGYSNGNGLGL--SEANQIDYNRWLSQQAHEHNLAIALKNAVELIPALVDDFDFALNESCYAYKECEAYR-LFRQQGKAVFIAEYRSYNSNMCSKASASG 236          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZ77_9PHAE5.300e-11977.36Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
D7FRL2_ECTSI2.030e-6152.38Endo alpha-1,4 polygalactosaminidase precusor n=1 ... [more]
A0A1I0KAA5_9DELT5.550e-5944.50Glyco_hydro_114 domain-containing protein n=3 Tax=... [more]
A0A7V4LGC7_9DELT4.900e-5549.49Endo alpha-1,4 polygalactosaminidase n=1 Tax=Delta... [more]
A0A5C8AXX1_9BURK5.920e-5547.76Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
A0A150SSH0_SORCE4.840e-5447.06Endo alpha-1,4 polygalactosaminidase n=3 Tax=Soran... [more]
A0A1G3E0C0_9GAMM6.060e-5447.57Glyco_hydro_114 domain-containing protein n=1 Tax=... [more]
Q098C2_STIAD6.780e-5442.66Endo alpha-1,4 polygalactosaminidase precusor n=2 ... [more]
A0A1H7R5T2_9GAMM1.050e-5348.11Glyco_hydro_114 domain-containing protein n=2 Tax=... [more]
A0A654BBT4_9PSED1.320e-5347.57Glyco_hydro_114 domain-containing protein n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13411contigL-elsbetiae_contig13411:3041..4769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.8
Seed ortholog evalue1.2e-94
Seed eggNOG ortholog2880.D7FPZ5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Endo alpha-1,4 polygalactosaminidase
EggNOG OGs2RCTR@2759,COG3868@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionGlycoside-hydrolase family GH114, TIM-barrel domain
Ec32 orthologEc-01_008070.1
Exons4
Model size922
Cds size687
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13411.2632.1prot_L-elsbetiae_contig13411.2632.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13411 3276..4769 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.078442-UTR-L-elsbetiae_contig13411:3040..32751622815513.078442-UTR-L-elsbetiae_contig13411:3040..3275Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13411 3041..3275 -
1691682935.2547503-UTR-L-elsbetiae_contig13411:3040..32751691682935.2547503-UTR-L-elsbetiae_contig13411:3040..3275Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13411 3041..3275 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.097216-CDS-L-elsbetiae_contig13411:3275..33441622815513.097216-CDS-L-elsbetiae_contig13411:3275..3344Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 3276..3344 -
1691682935.2712336-CDS-L-elsbetiae_contig13411:3275..33441691682935.2712336-CDS-L-elsbetiae_contig13411:3275..3344Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 3276..3344 -
1622815513.1146739-CDS-L-elsbetiae_contig13411:3573..36871622815513.1146739-CDS-L-elsbetiae_contig13411:3573..3687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 3574..3687 -
1691682935.2785099-CDS-L-elsbetiae_contig13411:3573..36871691682935.2785099-CDS-L-elsbetiae_contig13411:3573..3687Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 3574..3687 -
1622815513.1304436-CDS-L-elsbetiae_contig13411:3993..41911622815513.1304436-CDS-L-elsbetiae_contig13411:3993..4191Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 3994..4191 -
1691682935.2858865-CDS-L-elsbetiae_contig13411:3993..41911691682935.2858865-CDS-L-elsbetiae_contig13411:3993..4191Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 3994..4191 -
1622815513.1419852-CDS-L-elsbetiae_contig13411:4463..47691622815513.1419852-CDS-L-elsbetiae_contig13411:4463..4769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 4464..4769 -
1691682935.293366-CDS-L-elsbetiae_contig13411:4463..47691691682935.293366-CDS-L-elsbetiae_contig13411:4463..4769Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13411 4464..4769 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13411.2632.1

>prot_L-elsbetiae_contig13411.2632.1 ID=prot_L-elsbetiae_contig13411.2632.1|Name=mRNA_L-elsbetiae_contig13411.2632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
TQNTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKG
EFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDN
MMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLV
NKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKSVCDEANALG
LDTILKDYDLKPPFCSCVDPSRDLDCMY*
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mRNA from alignment at L-elsbetiae_contig13411:3041..4769-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13411.2632.1 ID=mRNA_L-elsbetiae_contig13411.2632.1|Name=mRNA_L-elsbetiae_contig13411.2632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1729bp|location=Sequence derived from alignment at L-elsbetiae_contig13411:3041..4769- (Laminarionema elsbetiae ELsaHSoW15)
ACACAAAACACCGCCGTGCACCGCTCCCGCCTGTTTCCCCCTTTTTCAGA CGCCGGGCAGGCCGTCATCGACGACCTGCACGAGAAGGGCAAGGGCGTTG TTTGCTACATCTCCATCGGCACCGTGGAAGACTGGCGATCAGACAAGGGC GAATTCCCCGCGTCGGCAATCGGCGGAGGTGTGGATGGGTGGGCCGGGGA AAAGTGGCTCGACGTGAACGACCCTCAAGTTCGGGAGGTCATGTCGGCAC GTGTTCAGACGGCGAAGAGTATGAGCTGTGACGCCATAGAACCAGACAAC ATGATGGTAAGAATACTGCAGGATAGGATCTGATGCGGAGACAAAACGAA GCCTGCGAATGAAAGTAGCCAACAGAGTCAAAAGTCCTACCATATAGTTG CAATGTTGAAAAGTCCATATTGTACCTACGGAGGTCAGGATACAATATGG GATCCTCGCTGCCGAGGGTTCCATTAAGATACAGGAGCCACACCCCCACA CCCCCCCCCTCTCCTGACCAAACCTCCCACCCCCCTCACTCTGCCGCGCT CGTACCATTATTCTGTATTTATGCATAGGTGTACACCGAGGGATCCGGAA CCGGCCTCGATGTGTCCGAGGCGGACCAGATCGACTACAACACTTGGTTC GCGGATGAGGTCCACCAAGCCGGGATGTTCGTCGGTCTCAAGAACACCGT CGAGCTGGTGCCTGTCCTCGTCAACAAGTTCGACTTCGCCTTGAACGAGG AGTGCCACACGTGGAACGAGTGCGGGGTGAGTTTTCTCTTTCAACAAGGC CCTGATAATAATTAGACATATGGTCGGATCTATCTACTCCGAAATACACC GTGTGTGGCTATCCTCTCGTTCGTAGTTCCTTGAACCTATACGTCCAAAA CAGAGTTTTGAGAACATCTGCGACAAGATGCTTGTATCCCGTATATCGGG AGTGTCTGTTTTGCCTACAGCAGTGTAGAGTCAAAACAACGCATGGTGAT CCCCACGCACGATCCTTTTCTGAGTTGTCCGCCCCCTCTCGGTGTCTCTC TCCGTGCGATTGACCGCCTTCGCCTCTCTCAGGAGTACAAGAAGACCTTC CTCGCCCAAGGCAAGCCCGTGTTCAACGTCGAGTACGACGGGGAGAAGTC CGTGTGCGACGAAGCGAATGCTCTCGGCCTCGACACCATCCTTAAGGTGC GTTTACTACTGCTGCTTTGCCAAAGGCTCTTCTGATGGGGCCTTTTCTTG CGGCTGCATACTCGCAGAACGAGGAGAAAGCAGCAGGAGCAAGAGTAAGA GTACCTCATGTAGCAAACCCGTGAACGTGTTGTGCTTGCACTCAAAGAGG GGTGCATCGAAATCATTGCGTGACCCCTTCTCCTGCCGCCGGTCCTCCGC GCCGGTTCTCTTTTCGTTGTCCCAGGATTACGACCTGAAGCCGCCCTTCT GCAGCTGTGTCGACCCTTCGAGGGACCTGGACTGCATGTACTAAACGGGG CGCGCGGGGGGGTGGTTTGACACAACGACCCTACGGGACCGACTGGTTGT ACCTTCATTCTCTCTCACATGGATGGTCGTTTTGTGTTGCTGGATGCTGT TGCATCGATGAAGTATTCAATGTTTTTATTGGGGGTTTCGGGGAGTGAAG GGGCAGGTTTTTGTTTACATCCATATCGCGGTCAGTGTTTGGGATGATGT TGTGGGTTCAGGACTTTGTTTGCAGGTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13411:3041..4769-

>mRNA_L-elsbetiae_contig13411.2632.1 ID=mRNA_L-elsbetiae_contig13411.2632.1|Name=mRNA_L-elsbetiae_contig13411.2632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig13411:3041..4769- (Laminarionema elsbetiae ELsaHSoW15)
ACACAAAACACCGCCGTGCACCGCTCCCGCCTGTTTCCCCCTTTTTCAGA
CGCCGGGCAGGCCGTCATCGACGACCTGCACGAGAAGGGCAAGGGCGTTG
TTTGCTACATCTCCATCGGCACCGTGGAAGACTGGCGATCAGACAAGGGC
GAATTCCCCGCGTCGGCAATCGGCGGAGGTGTGGATGGGTGGGCCGGGGA
AAAGTGGCTCGACGTGAACGACCCTCAAGTTCGGGAGGTCATGTCGGCAC
GTGTTCAGACGGCGAAGAGTATGAGCTGTGACGCCATAGAACCAGACAAC
ATGATGACACAAAACACCGCCGTGCACCGCTCCCGCCTGTTTCCCCCTTT
TTCAGACGCCGGGCAGGCCGTCATCGACGACCTGCACGAGAAGGGCAAGG
GCGTTGTTTGCTACATCTCCATCGGCACCGTGGAAGACTGGCGATCAGAC
AAGGGCGAATTCCCCGCGTCGGCAATCGGCGGAGGTGTGGATGGGTGGGC
CGGGGAAAAGTGGCTCGACGTGAACGACCCTCAAGTTCGGGAGGTCATGT
CGGCACGTGTTCAGACGGCGAAGAGTATGAGCTGTGACGCCATAGAACCA
GACAACATGATGGTGTACACCGAGGGATCCGGAACCGGCCTCGATGTGTC
CGAGGCGGACCAGATCGACTACAACACTTGGTTCGCGGATGAGGTCCACC
AAGCCGGGATGTTCGTCGGTCTCAAGAACACCGTCGAGCTGGTGCCTGTC
CTCGTCAACAAGTTCGACTTCGCCTTGAACGAGGAGTGCCACACGTGGAA
CGAGTGCGGGGTGTACACCGAGGGATCCGGAACCGGCCTCGATGTGTCCG
AGGCGGACCAGATCGACTACAACACTTGGTTCGCGGATGAGGTCCACCAA
GCCGGGATGTTCGTCGGTCTCAAGAACACCGTCGAGCTGGTGCCTGTCCT
CGTCAACAAGTTCGACTTCGCCTTGAACGAGGAGTGCCACACGTGGAACG
AGTGCGGGGAGTACAAGAAGACCTTCCTCGCCCAAGGCAAGCCCGTGTTC
AACGTCGAGTACGACGGGGAGAAGTCCGTGTGCGACGAAGCGAATGCTCT
CGGCCTCGACACCATCCTTAAGGAGTACAAGAAGACCTTCCTCGCCCAAG
GCAAGCCCGTGTTCAACGTCGAGTACGACGGGGAGAAGTCCGTGTGCGAC
GAAGCGAATGCTCTCGGCCTCGACACCATCCTTAAGGATTACGACCTGAA
GCCGCCCTTCTGCAGCTGTGTCGACCCTTCGAGGGACCTGGACTGCATGT
ACTAAGATTACGACCTGAAGCCGCCCTTCTGCAGCTGTGTCGACCCTTCG
AGGGACCTGGACTGCATGTACTAA
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