mRNA_L-elsbetiae_contig1341.2629.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1341.2629.1
Unique NamemRNA_L-elsbetiae_contig1341.2629.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A6H5KHX6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX6_9PHAE)

HSP 1 Score: 557 bits (1435), Expect = 9.970e-196
Identity = 280/355 (78.87%), Postives = 308/355 (86.76%), Query Frame = 3 
Query:   27 MAPCARLCLPAVLGALSCVQGFVLPASAP------RTPGCNGLPTAEAASTRRPTSSIRQ--RPRPSSRRGALGPDGEEIDIIRHREAYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPERIQEVFERDEWEGGSLTHEGKITPKVHLFKGKRSSTKAQSPDFLEELIEEVEGDALQGEVLEGTP-EDSQEWLTDAIAQGTISIPDEEPGDDVPHKDVGQDKPFKF 1064
            MAP +RLC+PA+L A+SCV GF+LP+S P      R  GCNGLPT   +    P SS     RPR  SRR ALGPDG+EIDIIRHREAYSY EYW++FYAGGEAGSL+DGESYDWFFGYSRLAVYLN+HVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFC PVI+AM+ AHA+KPG+EWKV+DARDMAE E   FDAVIDKG+TDS+MYNDKF++MMAKVS+EVARVLKPGGVYL+ DYRDPERIQE+FERDEWEGGSLT EGKIT KVHLFKGKRSS + Q+PDFLEELIEEVEGD +QGEVLE  P EDSQEWL DAIAQGTISIPDE P D+VPHKDVGQDKPFKF
Sbjct:    1 MAPGSRLCVPALLAAVSCVGGFILPSSGPTNRGTLRKRGCNGLPTVRGS----PASSAHDYCRPRRDSRRSALGPDGKEIDIIRHREAYSYAEYWDEFYAGGEAGSLKDGESYDWFFGYSRLAVYLNLHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCNPVIEAMQSAHADKPGMEWKVMDARDMAELETGSFDAVIDKGLTDSVMYNDKFSVMMAKVSYEVARVLKPGGVYLMADYRDPERIQELFERDEWEGGSLTQEGKITSKVHLFKGKRSSVEPQTPDFLEELIEEVEGD-VQGEVLEAIPQEDSQEWLVDAIAQGTISIPDEGPVDEVPHKDVGQDKPFKF 350
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: D7G816_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G816_ECTSI)

HSP 1 Score: 350 bits (898), Expect = 1.440e-116
Identity = 168/204 (82.35%), Postives = 187/204 (91.67%), Query Frame = 3 
Query:  456 MWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPERIQEVFERDEWEGGSLTHEGKITPKVHLFKGKRSSTKAQSPDFLEELIEEVEGDALQGEVLEGTP-EDSQEWLTDAIAQGTISIPDEEPGDDVPHKDVGQDKPFKF 1064
            MWENGWKDIVSIDFC PVI+AM+ AHA+KPG+EWKV+DARDM EFE   FDAVIDKG+TDS+MYNDKF++MMAKVS+EVARVLKPGGVYL+TDYRDPER+QE+FERDEWE GSLT EGKIT KVHLFKGKRSS + Q+PDFLEELIEEVEGD +QGEVLE +P EDSQEWL DAIAQGTI+IPDE P D+VPHKDVGQDKPFKF
Sbjct:    1 MWENGWKDIVSIDFCNPVIEAMQSAHADKPGMEWKVMDARDMVEFETGSFDAVIDKGLTDSVMYNDKFSVMMAKVSYEVARVLKPGGVYLMTDYRDPERVQELFERDEWESGSLTQEGKITSKVHLFKGKRSSVEPQTPDFLEELIEEVEGD-VQGEVLEASPQEDSQEWLADAIAQGTITIPDEGPADEVPHKDVGQDKPFKF 203
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A835YJ55_9STRA (S-adenosyl-L-methionine-dependent methyltransferase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ55_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.170e-49
Identity = 86/205 (41.95%), Postives = 125/205 (60.98%), Query Frame = 3 
Query:  234 EEIDIIRHREAYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGAR--AGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPERIQEVFERDEWEGGSLTHEGKITPKVHLFKG 842
            E+ D    R+ YS  E+W+ FY   + G  E GE+YDWF GY ++   L  H   AR  AG VL+LGCGNSE+S +M+++GW   ++IDF  PVID M+  H +KPG+EW V+DARDM+         VIDKG+ D++ ++D++   + KV  E ARVL+PGG Y+ T +  PE +  +   + W+   +   G +TP V L+ G
Sbjct:   16 EQRDYFLSRQQYSLREFWDAFYTPYDEGESEAGETYDWFLGYPKMREALLEHASHARNGAGTVLILGCGNSELSERMYDDGWTQQINIDFSKPVIDLMRSKHTDKPGMEWAVMDARDMSGVPDGSVQTVIDKGLIDALTHSDQYRDDIQKVVAESARVLRPGGSYICTSFNTPESLLPLLSNNAWQSEGVECRGNLTPTVLLYVG 220
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A5J9U7X1_9POAL (Methyltransf_11 domain-containing protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9U7X1_9POAL)

HSP 1 Score: 124 bits (310), Expect = 1.130e-28
Identity = 72/169 (42.60%), Postives = 101/169 (59.76%), Query Frame = 3 
Query:  252 RHREAYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDP-ERI 755
            R    Y    YW+  Y+ G + +  DGE +DW+  YS L   L  HV    + RVL+LGCGNS +S  M ++G++DIV+ID    VI+ M++ HAE   L +  +D RDM+ F+ E FD V+DKG  D++M  D      +K+  EVAR+L+P G+YLL  Y  P ERI
Sbjct:    6 RKSNDYGAAAYWDARYSSGSSPAGGDGEFFDWYQKYSALRPLLRAHV--PASSRVLMLGCGNSLLSEDMAKDGYQDIVNIDISSVVIEQMREKHAEIKQLTYMQMDVRDMSLFDDESFDCVLDKGTLDAMMCADDTPHGASKMLAEVARLLRPRGIYLLITYGAPKERI 172
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A059B5Q4_EUCGR (Methyltransf_11 domain-containing protein n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B5Q4_EUCGR)

HSP 1 Score: 120 bits (302), Expect = 7.500e-28
Identity = 70/175 (40.00%), Postives = 104/175 (59.43%), Query Frame = 3 
Query:  261 EAYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPE-RIQEVFERDEW 782
            +AY  P YW+  Y         D  ++DW+  YS LA  +N++V   R  RVLV+GCGNSE S  M ++G++D+V+ID    VI+AM+K ++ +P L++  +D R+M+ F++  F+AVIDKG  DS++         AK+  EV RVLK  GVY+L  Y  P  R+  + E   W
Sbjct:   12 QAYGEPWYWDRRYE-------TDSGAFDWYQKYSALAPLVNLYV--PREDRVLVVGCGNSEFSEGMVDDGYEDVVNIDISSVVIEAMQKKYSNRPQLKYMKMDVREMSGFDSHSFNAVIDKGTLDSLLCGHNSRQNAAKMLEEVGRVLKDKGVYILITYGAPTYRLNLLKEMGSW 177
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A6P5F2C5_ANACO (methyltransferase-like protein 13 isoform X2 n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F2C5_ANACO)

HSP 1 Score: 119 bits (298), Expect = 2.010e-27
Identity = 68/174 (39.08%), Postives = 103/174 (59.20%), Query Frame = 3 
Query:  264 AYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPE-RIQEVFERDEW 782
            +Y    YW+D Y        +DG  +DW+  Y+ L+   ++++   R+ R+L++GCGNS +   M ++G++DI++ID    VI+AM++ + +KP L++  +D RDMA FE+  FD VIDKG  DSIM          K+  EVARVLK  GVY+L  Y DP  R+  +   D W
Sbjct:   20 SYGETAYWDDRYR-------KDGGPFDWYQKYAPLSPLFDLYL--RRSHRLLLVGCGNSVLGESMVDDGYQDIINIDISTVVIEAMQQKYKDKPALKYLKMDVRDMAGFESNSFDGVIDKGTLDSIMCGHNAHENATKMLEEVARVLKDKGVYILITYGDPSYRLCVLKNLDTW 184
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A2Z7BHP7_9LAMI (Methyltransf_11 domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BHP7_9LAMI)

HSP 1 Score: 118 bits (296), Expect = 1.110e-26
Identity = 65/164 (39.63%), Postives = 93/164 (56.71%), Query Frame = 3 
Query:  255 HREAYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDP 746
            H +AY    YW+D Y        +D   +DW+  Y  LA  ++ ++   R   VLV+GCGNS  S  M ++G+ ++V+IDF   VI+AMKK +   P L++  +DARDM+ F A  FDAV+DKG  DS++          ++  EV RVLK  GVY+L  Y  P
Sbjct:   13 HTQAYGESWYWDDRYT-------QDPAQFDWYQSYPALAPLISFYI--RRRHHVLVVGCGNSAFSESMVDDGYDEVVNIDFSSVVIEAMKKKYPIHPNLKYMTMDARDMSSFSANSFDAVVDKGTLDSLLCGQNSRPNANRMLEEVYRVLKENGVYILITYGSP 167
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A6P5F2G5_ANACO (methyltransferase-like protein 13 n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5F2G5_ANACO)

HSP 1 Score: 119 bits (297), Expect = 1.130e-26
Identity = 68/174 (39.08%), Postives = 103/174 (59.20%), Query Frame = 3 
Query:  264 AYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPE-RIQEVFERDEW 782
            +Y    YW+D Y        +DG  +DW+  Y+ L+   ++++   R+ R+L++GCGNS +   M ++G++DI++ID    VI+AM++ + +KP L++  +D RDMA FE+  FD VIDKG  DSIM          K+  EVARVLK  GVY+L  Y DP  R+  +   D W
Sbjct:   41 SYGETAYWDDRYR-------KDGGPFDWYQKYAPLSPLFDLYL--RRSHRLLLVGCGNSVLGESMVDDGYQDIINIDISTVVIEAMQQKYKDKPALKYLKMDVRDMAGFESNSFDGVIDKGTLDSIMCGHNAHENATKMLEEVARVLKDKGVYILITYGDPSYRLCVLKNLDMW 205
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A8B9AQ00_PHODC (EEF1A lysine methyltransferase 4 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AQ00_PHODC)

HSP 1 Score: 117 bits (293), Expect = 1.860e-26
Identity = 65/161 (40.37%), Postives = 95/161 (59.01%), Query Frame = 3 
Query:  264 AYSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDP 746
            AY  P YW+  Y        +D   +DW+  Y  LA  L++++   R+ R+L++GCGNSE+   M  +G++D+V+ID    V++AM+K + +KP L++  +D RDM  FE   FDA+IDKG  DS+M          K+  EV RVLK  GVY+L  Y DP
Sbjct:   13 AYGDPAYWDQRYR-------QDPGPFDWYQKYKTLAPLLDLYL--RRSHRLLLVGCGNSELGEHMIADGYQDVVNIDISSVVVEAMQKKYQDKPQLKYIKMDVRDMNSFEDGSFDAIIDKGTLDSLMCGQNAQHNATKMLEEVGRVLKDKGVYILITYGDP 164
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BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Match: A0A2T7EE87_9POAL (Methyltransf_11 domain-containing protein n=6 Tax=Panicum TaxID=4539 RepID=A0A2T7EE87_9POAL)

HSP 1 Score: 117 bits (293), Expect = 2.590e-26
Identity = 68/164 (41.46%), Postives = 95/164 (57.93%), Query Frame = 3 
Query:  267 YSYPEYWEDFYAGGEAGSLEDGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWKDIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKGMTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDP-ERI 755
            Y    YW+  Y+ G   S   G+ +DW+  Y+ L   L   +    A RVL+LGCGNS +S  M ++G+KDIV+ID    VI+ M++ H E P L +  +D RDM  F  E FD V+DKG  D++M  D      +K+  EVAR+L+P G+YLL  Y  P ER+
Sbjct:   11 YGAAAYWDARYSSGSPASGGGGKFFDWYQTYAALRPLLRARI--PAASRVLMLGCGNSLLSEDMAKDGYKDIVNIDISSVVIEQMREKHKEIPQLTYMQMDVRDMTFFADESFDCVLDKGTLDAMMCADDAPDGASKMLAEVARLLRPHGIYLLITYGAPKERV 172
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1341.2629.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHX6_9PHAE9.970e-19678.87Methyltransf_11 domain-containing protein n=1 Tax=... [more]
D7G816_ECTSI1.440e-11682.35Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835YJ55_9STRA3.170e-4941.95S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A5J9U7X1_9POAL1.130e-2842.60Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A059B5Q4_EUCGR7.500e-2840.00Methyltransf_11 domain-containing protein n=3 Tax=... [more]
A0A6P5F2C5_ANACO2.010e-2739.08methyltransferase-like protein 13 isoform X2 n=1 T... [more]
A0A2Z7BHP7_9LAMI1.110e-2639.63Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A6P5F2G5_ANACO1.130e-2639.08methyltransferase-like protein 13 n=3 Tax=Ananas c... [more]
A0A8B9AQ00_PHODC1.860e-2640.37EEF1A lysine methyltransferase 4 n=1 Tax=Phoenix d... [more]
A0A2T7EE87_9POAL2.590e-2641.46Methyltransf_11 domain-containing protein n=6 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1341contigL-elsbetiae_contig1341:18597..25098 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.5
Seed ortholog evalue8.9e-94
Seed eggNOG ortholog2880.D7G816
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG2352@1,KOG2352@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionMethyltransferase type 11
Ec32 orthologEc-06_009800.1
Exons6
Model size1488
Cds size1041
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1341.2629.1prot_L-elsbetiae_contig1341.2629.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1341 18623..24677 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.8662784-UTR-L-elsbetiae_contig1341:18596..186221622815512.8662784-UTR-L-elsbetiae_contig1341:18596..18622Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1341 18597..18622 +
1691682935.1419883-UTR-L-elsbetiae_contig1341:18596..186221691682935.1419883-UTR-L-elsbetiae_contig1341:18596..18622Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1341 18597..18622 +
1622815512.9501355-UTR-L-elsbetiae_contig1341:24677..250981622815512.9501355-UTR-L-elsbetiae_contig1341:24677..25098Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1341 24678..25098 +
1691682935.2175622-UTR-L-elsbetiae_contig1341:24677..250981691682935.2175622-UTR-L-elsbetiae_contig1341:24677..25098Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1341 24678..25098 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815512.8796315-CDS-L-elsbetiae_contig1341:18622..189001622815512.8796315-CDS-L-elsbetiae_contig1341:18622..18900Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 18623..18900 +
1691682935.1533425-CDS-L-elsbetiae_contig1341:18622..189001691682935.1533425-CDS-L-elsbetiae_contig1341:18622..18900Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 18623..18900 +
1622815512.8896043-CDS-L-elsbetiae_contig1341:19856..200271622815512.8896043-CDS-L-elsbetiae_contig1341:19856..20027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 19857..20027 +
1691682935.1641288-CDS-L-elsbetiae_contig1341:19856..200271691682935.1641288-CDS-L-elsbetiae_contig1341:19856..20027Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 19857..20027 +
1622815512.899624-CDS-L-elsbetiae_contig1341:21927..220121622815512.899624-CDS-L-elsbetiae_contig1341:21927..22012Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 21928..22012 +
1691682935.1760747-CDS-L-elsbetiae_contig1341:21927..220121691682935.1760747-CDS-L-elsbetiae_contig1341:21927..22012Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 21928..22012 +
1622815512.910069-CDS-L-elsbetiae_contig1341:22327..224441622815512.910069-CDS-L-elsbetiae_contig1341:22327..22444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 22328..22444 +
1691682935.1897144-CDS-L-elsbetiae_contig1341:22327..224441691682935.1897144-CDS-L-elsbetiae_contig1341:22327..22444Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 22328..22444 +
1622815512.9226325-CDS-L-elsbetiae_contig1341:23729..238511622815512.9226325-CDS-L-elsbetiae_contig1341:23729..23851Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 23730..23851 +
1691682935.1997612-CDS-L-elsbetiae_contig1341:23729..238511691682935.1997612-CDS-L-elsbetiae_contig1341:23729..23851Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 23730..23851 +
1622815512.9376442-CDS-L-elsbetiae_contig1341:24409..246771622815512.9376442-CDS-L-elsbetiae_contig1341:24409..24677Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 24410..24677 +
1691682935.2078567-CDS-L-elsbetiae_contig1341:24409..246771691682935.2078567-CDS-L-elsbetiae_contig1341:24409..24677Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1341 24410..24677 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1341.2629.1

>prot_L-elsbetiae_contig1341.2629.1 ID=prot_L-elsbetiae_contig1341.2629.1|Name=mRNA_L-elsbetiae_contig1341.2629.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=347bp
MAPCARLCLPAVLGALSCVQGFVLPASAPRTPGCNGLPTAEAASTRRPTS
SIRQRPRPSSRRGALGPDGEEIDIIRHREAYSYPEYWEDFYAGGEAGSLE
DGESYDWFFGYSRLAVYLNMHVGGARAGRVLVLGCGNSEVSPKMWENGWK
DIVSIDFCPPVIDAMKKAHAEKPGLEWKVVDARDMAEFEAEYFDAVIDKG
MTDSIMYNDKFALMMAKVSFEVARVLKPGGVYLLTDYRDPERIQEVFERD
EWEGGSLTHEGKITPKVHLFKGKRSSTKAQSPDFLEELIEEVEGDALQGE
VLEGTPEDSQEWLTDAIAQGTISIPDEEPGDDVPHKDVGQDKPFKF*
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mRNA from alignment at L-elsbetiae_contig1341:18597..25098+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1341.2629.1 ID=mRNA_L-elsbetiae_contig1341.2629.1|Name=mRNA_L-elsbetiae_contig1341.2629.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6502bp|location=Sequence derived from alignment at L-elsbetiae_contig1341:18597..25098+ (Laminarionema elsbetiae ELsaHSoW15)
GTGGACGTGAGACGTGAGAAGGTATCATGGCTCCTTGCGCTCGTCTTTGC
TTGCCTGCTGTACTGGGTGCTTTATCGTGCGTTCAAGGGTTTGTCCTTCC
AGCGTCAGCCCCCAGAACTCCCGGATGCAACGGTTTGCCGACCGCCGAAG
CAGCTTCCACGCGGAGGCCCACTTCTTCGATACGCCAACGCCCTCGGCCA
TCCTCTAGACGGGGTGCATTGGGACCTGATGGAGAGGAAATCGACATCAT
TAGACATCGAGAGGCGTACTCGTACCCTGAGTACTGGGAAGACTTTTACG
CCGGGTGAGCAGTTCGTGCATATTTGATATTTGAACTCATGACGATCTGC
TGACTGGTATGTGTTTCAACCTGCGTTTGCTCTGCGCAAGCCAACAGCAA
ATACCCGCCCTATTTATCACTGCAAATGTAGATCTACGGGGTGGACTGGT
TTGTTGTCACATCCCGTAAGATTGCAGTGGTCAATGGGTTGCGCAAGGTG
TCGGAGTGCACAGTAACCAAAATGAACCAAAATGGTCTCCCGGGTTCCTG
CGTGGTCCCCATGACAGAGTGTATGTAGCAGCACCCCCATTTGAGACCTC
GTGGTGTGAACCGCGGGGCTGAAGCTGCACAATGTGATGACGCCTGTACG
GGTTTTTCTCTGTTGTTGAATGAAGCCACAAAAGCCCCGAATGCTCAATT
TCGGCTGAGGTTTCGGGTGCCATCCCCGGGCTACCGTACTACGCCGCACG
GCACCGACAGTCACATGTTTTGTCTCCCGTGTCCCTGCTTTTTCTTAGAA
ACAAACTGAACCACTCCCAAACAATCAGTAGTCATCTCACGTCTCGGGCA
CGTTTGTTCTAGACTCTTATCTGAAATATCAACGTGTTGGAACCCGTGCT
CGGCCTCGTGATGTAGACTATGTATATATGTCTCGTCTCTCTTCCTCTCT
CCTCTTCGTAAGCCTGCACCGTCGGCCCTCATCGCCTACTCACACACTGT
CACTGCGATGTGTCTCACAACGCTGGCTTTGGGGCGTCTCTTCATTGCTG
CATACCTGGGCTCTGATTGAGCCTGCCAGGCTACCCCCGCACCCCCCGCC
CTCTTCCCATATTTTGGCCACATAAGCACCCAGGATCCTGTGTCTGCCGC
CCGCGTGCCTACGTGCCTACCGCTGTGACCCTTCCGGGTGTGCTCTGACA
CTCACACACTCAATTCTTGCGCGACGCGGATGGTGCTGCCCGTGCTCCTG
CGGCTTGCAGGGGCGAGGCCGGCAGCCTTGAGGACGGAGAGAGCTACGAC
TGGTTCTTCGGCTACTCGAGGCTGGCGGTCTACCTGAACATGCACGTTGG
CGGGGCCCGGGCGGGGCGTGTGTTGGTGCTGGGGTGTGGTAACTCGGAGG
TGTCCCCCAAGATGTGGGAGAACGGTTGGAAGTGAGTGAAACGCCAAGCA
TTACTCTGTGTGGGCGTCGTTTTTAGAAAGGAAATCAAGATCTGGCTAGT
CTGGTCCCCCCCACCGCGCCGCATGAACGAGGGTTTTCCGTTTTTTTTAC
TGATATACATCTAGATACCGTGACGGGAGCTGTGGTTACTGTGGTCGTTA
TGAGCAGCCCGGCTGTTTGAGCTTTATGTCCCCCTCCGCTTGAATAGCTT
GAACAGCTGCTGATGACAAACGTCAGTCAGCTCTTTCCTGCAAACCTGCA
GCGGTCTTTTCTTTCAACGATGGCCGTCCAACGGCATGAAACAGTCCTCC
CTGTAAGGTTGAGATGGCACGCACGCACGGCCCCCCACTCGATAACTCTT
CGTCTATCTCGACTTCCTCGAGACAGATGAAAGCAGGAGAGTTTTTCTGT
AACGCTCATAACACGCACGATCGGTGGTTCTCGCCTCTATCCCAAGGTGC
ACGACGTAAGCGGGTTATGGTTCTTTAGTGTGGCGGCTGTTATCGCGCTG
ACACTTCCCTCGGAAACTTCAAACAAGAGTGTAACGCAACCCGAACAGCA
GTCAACAGCAGGTCAAGCAGTCAACAAGCAATCTAGCTGATCTTCTCCTG
CTGTTTTTGTTCATTTTTCCGGCGAACACACACAAACGAACACATACACA
CACGCAAGTCGGCGCAAATGTTTTTCGGCGTTTTTTGTTTCCTTCTCCCG
GTGTTGACTATATTTGAAATCGTTGAAAACGCTTCCATGTCGGGCAGAAC
AGCATGCAGGTATCGGACGATTGGTCCGCTCTCTTGCTTCACCCTCTGGA
GTCTGTATTCCTTGAGCAACGTCTGAAAGGGAGGCTTGTATACCGTAGGT
GACATAAGATAAGACACCCCCTGGACCGATATTGAAAGCTTGGTTACTCC
GCAACGAATACGATTCTAACCACAAACGCCGCATTTTCGGACAGCTCTCG
ACGAGATCTTTCCAACGCCGCCCTTTTCGGGACTGACGCTCTGCTTGCTT
TGGAGTACTTGAGCTTTGAAAATCTGTCCAGGGGGTGTCTCATCTTGTGT
CACCTACGGTAGTCTACAAATGTCAGCATCTACGTCTGTGAAGAAGTCGT
TCCAGAGGGACTGTCGTGGACTTTTTTTTGTGGCACTTTCAAGTGTGAGG
CGTGCTGGCATGAGCCTGCAAGCAGTGCTTTCGCAGTTTGTTCTCAAAGA
TCGTGCTCGTTTTGTCGCGGCTTCGCAACGTACGTAGCACTCCTGTCCGG
CTGATCCGTACTCTCCAAAGTGGTGCCAAGGGGTCTGTCTGCATGGGAAC
CGTGCGGTGCCGTGTGATGCCATGCCCTGCTATGCACGAGAGGTAGTATG
TAGTAGTTTCACTGCTGAAAACAAAGCGCTGCTGCTGCTGCTCTGCATGT
TCCGACGTACAGCAGGTTTGCATGGATCTGCGGTCGGGCTTTGGTCGCTG
TTCTCTCCTCGGTCGTTGTTGCGCTCCTTGTTGTTGTTCTCGTTCAAGAC
GATTCTGGCTCCTACGGCACTGACTACTACTGCTGTGCCTCGATATTCCG
TACTGGTCAAGCCAAAATAAGACAGCCCCCTGAGTCACAGACGATAATGG
CGCAATTCAGGCATTCGGACATATAGATAAATGGCAACGACAAACTCATC
TGGACACTTCGGAGAGTTTCAAAGGGCCACAGCTGCACGGCGGTGGCGTT
TCGATGTAGCGGCCTGGAGTTAAATGGCCCAACTTCCGTGGAAAAAGAAG
CACTATTGCCTAGACCAAGCCTTATTAACGCAAGCATCGATCCCCCTTCG
ATTCCTCTGCCATTGGGTACCAACGTACCAACCAACCCTCATGAAACTTT
CGAAAATTATTTTTTTTTCTTGCTGCCGCAGAGACATTGTCAGCATCGAC
TTCTGCCCCCCTGTGATCGACGCGATGAAGAAAGCGCACGCCGAAAAGCC
TGGGCTGGAATGGAAGGTGCGCGTGTTTGAAGCCGTGCCGTGTTCGCGCG
GCGACTTCGGAACAATGTACCACTGTACGAACTATGTATGTATGGTGTTT
TTGCTGAAAACATGCTTTCCATAAGAATATCTACAAGGTGACACCCCTAC
AAGTGCTGTGCTCCAGAATTTCGAAGGTTTGGGCGTGTCGTATTATTTTG
TGTGTATGGCAAAGGGGCTCTGTTGTGTTCGCTTTATCAGTGGTTGCACC
CAGATGTCCCGCCTTCAGACTCAAAGAACCAGCCGTGATTCCAGTCCGTG
TGAGCATACCTCCTCTGTGCTTTTTGTTCAGGTTGTGGACGCCAGGGATA
TGGCTGAGTTCGAGGCCGAATATTTCGACGCTGTTATCGACAAAGGGATG
ACCGATTCGATCATGTACAACGACAAGTTCGCGCTTATGATGGCAAAGGT
GAGTATCCATCCGTTATATCCCGGAAAATTACTGCAATAAAACAGCTGTA
AGACAGCAGAGTCAGCTGCGAAGACTCGCCTTGAAGCAGGCAACGGGATC
GCGAACACGAAGAACCCGCTTTTTTCGTTCGCTCTGTGTTCTCTCGGCGT
GTTCTTTGTGTCGAAGCGACGAAAGACGCTACACCGCGGCGTAACAAGTG
TGCCATCATGGTGGCAAAATAGCTCAGCGCAGCAGTTGCTCCCGCGAAAA
CAGACCAAAAACAAATCCCAGGTATACACCGTTACTCCGTTTTCATGTAG
GTGAACGTTCCTGTAGCTTAAGGCTGCGGGAAGGGGTACCCATCGATCAG
TATGGGCCTTGCTCAAAGAATAATCGCATACCCCCGCTGAACATCACGGA
GCCTCACTTGAAATTTGTGTGGGCTTTCCAAAAATGCCCGCATGTTTTCA
CAGTCCAGCCAAAAAACAGAGGTGTTCCGAGGTTCTCGGCTCTTTTTTGT
CATGGTTGCGCAGGGTTTTTAAACCACCCCTGGCGCGTGTGAACTGGGAA
GTAAGTTATGCTGAAATTTGCTGCTGGACCTTTCCTCCATCCCACACTCT
TTGAAAACAGCCGGGCTACAATCGCGTCGAATCCGTTTTTTGATCGGTGC
AAAAATCACGGTGGTAGGCTCCGGGGTGCAGTCTCAAATACCCACCCGAT
TCACCGAAAAAATTATTGTCGGGAAAGTCGATCTTGTCCACCAGCACATC
CAAAGCGTGGCTTATAGGTATCTGCTGCTGCTACCAAGGACATGCGGCGG
CCCCTACACACCATATCAGTAGGCACTCCCTGCATGTTCCACCGTTCTTG
CCTGTGAGGGGCGGGCTATCTGATCTCTTGAACACCAAGCTCCCAGTTCG
GTCTTGCTTTGACAGTCCTGTGGAATAAGTGATTTTCTACCTTTGAAAGG
AAAATCTCCACCATCAAGGCAGCTACAAATTAATAGCATACTTTTAATCT
GTAGAGAACGGCAAACTGTGGCGTTGGAGTGTCCCATTTCGTATCGCAGC
GGGATGCTAAGGGCCGAACTGGAAAGGGTGCTTTTGGGAGGGTCCCTGCA
GTCGATTTTCGCATACCCCAAAAAGTGTGCACTCAAAAAATCAATCAAAC
CGTGATCGTCCCTGAGCCCCTGGATCCAAAGTACACTGTGGGCCCCCCCC
TACCCGCCGCCTCAACGTCACTCCATTTTCATGTAGGTGAACGTTCCAGT
AGCTTAAAGTTATGTTGGTCATATCATCATCAGGTATCGTTCGAGGTAGC
CCGCGTGCTGAAGCCGGGAGGGGTTTACCTCCTGACGGACTACCGGGATC
CCGAAAGAATACAGGAGGTGTTCGAGCGCGACGAGTGGGAAGGTGGCTCT
CTCACGTGAGTCTCTTTTTTCTGTGGACTGGGCCTCGACGCACATGACAA
CAGGCAGCAGTAGTGCTTCTCTGTCAATGGCTTGACCCGTTAGCTGAATT
TCAGCGAATGGTGTTCCGGAAAGCACGTGGCTCGACGCTTTGCACCCTTC
CCTTTGCGGAGATCTTAACCATGAGCTTGGCTTGTTTGTGGAGGGAGAGT
AAGGGGCGGGGAGTGAAACGAATTTCCGTCGAGAACCTAGCGTCTACCCT
GCACACTTGCGATGGACCATACCAACGCAAGTGTTCATCTCATGGTGCGC
TCACGCAGGTTGTGTGTACGGAACGCTGTGGCATCCCCAAAATTGCAAGC
ACGTTCACTGCACGTGTGTGTGTGCATGTTTTTTTGCTATTTTTTGTTTT
CAGCGTACAACGTGAACGAGTTTCTTATCCTGCTTTCCTAGGCTGGTGCC
GGCAGGTCAGTGTCCACTTTTTCTCCCTCTGTGACGGGCGGTCAAGAGTT
TCCCACCAGCTAACCCCTCACTCTGTTTTTCGTGTGCGTTTTGTCTTCCT
TGCTCTCACAAAGACACGAAGGAAAAATCACCCCGAAGGTGCACCTGTTC
AAGGGAAAGCGCTCGTCGACGAAGGCCCAGTCACCCGACTTCTTGGAGGA
GTTGATAGAGGAGGTCGAAGGAGATGCCCTCCAGGGGGAGGTGTTGGAAG
GGACCCCGGAGGACTCTCAGGAGTGGCTGACAGACGCGATCGCGCAGGGC
ACGATCAGCATACCCGACGAAGAGCCCGGGGACGACGTTCCGCACAAAGA
CGTCGGGCAAGATAAACCCTTCAAGTTTTAATTAACTTATCTATAACTAA
TTTGACGGTCGTGTTGTGAAGAATCACTGCCGTCTGTCCGTCTCCGGTTT
CTGAGTAGTTTAATGCGGGAGAGGTCAGCCGGAAAAGGCTTATGCTGACG
GAGGAAATTTGACACAAAGAGAGACATAGTGCATGCTCATTCATGCCCAG
TAGTTTGTTGCTTTGTTTGGCAGCTGATGATTCAGGGGAAAACGCCGGGC
GGGGTGCTCACGTTGTTTGCTAATCCCTTCCCAAGGGTTGAACGTGCGCG
GTTGGAGACCGAGCGTGACAAGGATCGCGTATTTTTTGTTCGAGTGCCCC
CCAGCTTTTTCGTTGGTGGCTGCAACGTGCTGCCTGCGTGCTATCGTCGA
CCAAAGACGTACTCGACGCGCATGCTGTGTAAGGGATGGACGTGGAAACA
TA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1341:18597..25098+

>mRNA_L-elsbetiae_contig1341.2629.1 ID=mRNA_L-elsbetiae_contig1341.2629.1|Name=mRNA_L-elsbetiae_contig1341.2629.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2082bp|location=Sequence derived from alignment at L-elsbetiae_contig1341:18597..25098+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCTCCTTGCGCTCGTCTTTGCTTGCCTGCTGTACTGGGTGCTTTATC
GTGCGTTCAAGGGTTTGTCCTTCCAGCGTCAGCCCCCAGAACTCCCGGAT
GCAACGGTTTGCCGACCGCCGAAGCAGCTTCCACGCGGAGGCCCACTTCT
TCGATACGCCAACGCCCTCGGCCATCCTCTAGACGGGGTGCATTGGGACC
TGATGGAGAGGAAATCGACATCATTAGACATCGAGAGGCGTACTCGTACC
CTGAGTACTGGGAAGACTTTTACGCCGGATGGCTCCTTGCGCTCGTCTTT
GCTTGCCTGCTGTACTGGGTGCTTTATCGTGCGTTCAAGGGTTTGTCCTT
CCAGCGTCAGCCCCCAGAACTCCCGGATGCAACGGTTTGCCGACCGCCGA
AGCAGCTTCCACGCGGAGGCCCACTTCTTCGATACGCCAACGCCCTCGGC
CATCCTCTAGACGGGGTGCATTGGGACCTGATGGAGAGGAAATCGACATC
ATTAGACATCGAGAGGCGTACTCGTACCCTGAGTACTGGGAAGACTTTTA
CGCCGGGGGCGAGGCCGGCAGCCTTGAGGACGGAGAGAGCTACGACTGGT
TCTTCGGCTACTCGAGGCTGGCGGTCTACCTGAACATGCACGTTGGCGGG
GCCCGGGCGGGGCGTGTGTTGGTGCTGGGGTGTGGTAACTCGGAGGTGTC
CCCCAAGATGTGGGAGAACGGTTGGAAGGGCGAGGCCGGCAGCCTTGAGG
ACGGAGAGAGCTACGACTGGTTCTTCGGCTACTCGAGGCTGGCGGTCTAC
CTGAACATGCACGTTGGCGGGGCCCGGGCGGGGCGTGTGTTGGTGCTGGG
GTGTGGTAACTCGGAGGTGTCCCCCAAGATGTGGGAGAACGGTTGGAAAG
ACATTGTCAGCATCGACTTCTGCCCCCCTGTGATCGACGCGATGAAGAAA
GCGCACGCCGAAAAGCCTGGGCTGGAATGGAAGAGACATTGTCAGCATCG
ACTTCTGCCCCCCTGTGATCGACGCGATGAAGAAAGCGCACGCCGAAAAG
CCTGGGCTGGAATGGAAGGTTGTGGACGCCAGGGATATGGCTGAGTTCGA
GGCCGAATATTTCGACGCTGTTATCGACAAAGGGATGACCGATTCGATCA
TGTACAACGACAAGTTCGCGCTTATGATGGCAAAGGTTGTGGACGCCAGG
GATATGGCTGAGTTCGAGGCCGAATATTTCGACGCTGTTATCGACAAAGG
GATGACCGATTCGATCATGTACAACGACAAGTTCGCGCTTATGATGGCAA
AGGTATCGTTCGAGGTAGCCCGCGTGCTGAAGCCGGGAGGGGTTTACCTC
CTGACGGACTACCGGGATCCCGAAAGAATACAGGAGGTGTTCGAGCGCGA
CGAGTGGGAAGGTGGCTCTCTCACGTATCGTTCGAGGTAGCCCGCGTGCT
GAAGCCGGGAGGGGTTTACCTCCTGACGGACTACCGGGATCCCGAAAGAA
TACAGGAGGTGTTCGAGCGCGACGAGTGGGAAGGTGGCTCTCTCACACAC
GAAGGAAAAATCACCCCGAAGGTGCACCTGTTCAAGGGAAAGCGCTCGTC
GACGAAGGCCCAGTCACCCGACTTCTTGGAGGAGTTGATAGAGGAGGTCG
AAGGAGATGCCCTCCAGGGGGAGGTGTTGGAAGGGACCCCGGAGGACTCT
CAGGAGTGGCTGACAGACGCGATCGCGCAGGGCACGATCAGCATACCCGA
CGAAGAGCCCGGGGACGACGTTCCGCACAAAGACGTCGGGCAAGATAAAC
CCTTCAAGTTTTAAACACGAAGGAAAAATCACCCCGAAGGTGCACCTGTT
CAAGGGAAAGCGCTCGTCGACGAAGGCCCAGTCACCCGACTTCTTGGAGG
AGTTGATAGAGGAGGTCGAAGGAGATGCCCTCCAGGGGGAGGTGTTGGAA
GGGACCCCGGAGGACTCTCAGGAGTGGCTGACAGACGCGATCGCGCAGGG
CACGATCAGCATACCCGACGAAGAGCCCGGGGACGACGTTCCGCACAAAG
ACGTCGGGCAAGATAAACCCTTCAAGTTTTAA
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