prot_L-elsbetiae_contig1340.2621.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1340.2621.1
Unique Nameprot_L-elsbetiae_contig1340.2621.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1220
Homology
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: D7FXA4_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA4_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 2.010e-68
Identity = 110/121 (90.91%), Postives = 112/121 (92.56%), Query Frame = 0
Query: 1010 RVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGKEGCFQCSRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGCEYASKT 1130
            R RR SRKK KKPVWSQLRKACDRCTSKKV+CDGKEGCFQCSR GATCHFSICRRSGPRDSNGHKTGT+GPIIPRDGYEKVTGRRGSCR SS CRF  ADGQSKTEHYHCR PGCEYASKT
Sbjct:   61 RPRRPSRKKTKKPVWSQLRKACDRCTSKKVRCDGKEGCFQCSRVGATCHFSICRRSGPRDSNGHKTGTIGPIIPRDGYEKVTGRRGSCRISSQCRFVSADGQSKTEHYHCRAPGCEYASKT 181          
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: D7G066_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G066_ECTSI)

HSP 1 Score: 138 bits (347), Expect = 8.210e-30
Identity = 75/144 (52.08%), Postives = 86/144 (59.72%), Query Frame = 0
Query:  993 AKQAKRRGVGGNGGTYRRVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGK------EGCFQCSRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGCEYASKT 1130
            A  A+ RGV     T    R + RKK K  VWSQ RKACDRCT KKV+CDG       + C  C RAG  C F ICRRSGPRD +GHKT   G I+ R+ +EKVT R G CRT + CRF   DG    EH+HCR   C +A KT
Sbjct:  490 AAPARNRGV----ATAASGRPSPRKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACIFGICRRSGPRDEHGHKTAAAGVIMKRNDFEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKT 628          
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: A0A6H5JPG2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG2_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 1.030e-29
Identity = 75/145 (51.72%), Postives = 88/145 (60.69%), Query Frame = 0
Query:  993 AKQAKRRGVGGNGGTYRRVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGK------EGCFQCSRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGCEYASKTM 1131
            A  A+ RGV     T    R + RKK K  VWSQ RKACDRCT KKV+CDG       + C  C RAG  C F ICRRSGPRD++GHKT   G I+ R+ +EKVT R G CRT + CRF   DG    EH+HCR   C +A KT+
Sbjct:  739 AAPARNRGV----ATAASGRPSPRKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACLFGICRRSGPRDAHGHKTAAAGVIMKRNDFEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKTL 878          
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC)

HSP 1 Score: 59.7 bits (143), Expect = 3.480e-5
Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 0
Query: 1026 QLRKACDRCTSKKVKCDGKEGCFQCSRAGATCHFSICRRSGPR-----DSNGHKTG--TLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGC 1124
            +LR++CDRCTSKK++CDG   C  C R G  CH+S  RR+GP+     D +    G  +   +IP    ++ +   GS R S     A  DGQ   +     T  C
Sbjct:   11 KLRRSCDRCTSKKIRCDGLAACQNCVRRGYACHYSERRRTGPKIRTAADDHPELQGLSSADGLIPWSN-DRPSSASGSERASRSASTAIDDGQVNPKLDDISTNSC 115          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FXA4_ECTSI2.010e-6890.91Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7G066_ECTSI8.210e-3052.08Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5JPG2_9PHAE1.030e-2951.72Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
K8YU74_NANGC3.480e-535.85Tpa: zn 2cys6 transcription factor n=3 Tax=Monodop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 1025..1068
e-value: 1.3E-5
score: 34.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 1029..1059
e-value: 2.5E-5
score: 24.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 1030..1057
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 1030..1059
score: 9.424
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 1023..1078
e-value: 8.3E-8
score: 34.1
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 1021..1065
NoneNo IPR availablePANTHERPTHR47663FAMILY NOT NAMEDcoord: 799..1128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1340contigL-elsbetiae_contig1340:8115..16936 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1340.2621.1mRNA_L-elsbetiae_contig1340.2621.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1340 8115..16936 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1340.2621.1 ID=prot_L-elsbetiae_contig1340.2621.1|Name=mRNA_L-elsbetiae_contig1340.2621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1220bp
MDGAQVSKTPPSLIAVPRRHSMEVLPAPLEGASVSLRKNDDGSSSSRQRY
QQRSSLAIPAPSPPPQTISSGDASGISHFSARRSQDTARTRHQKTSASTP
LIGIGPESPTFISSPTGLLTISTGLSPTKGPCRGSLASAASGSPGPVGYY
PSSSDSQPRTKIFAASPSAGGAFTPHSSSAFGAYPSTRPLYMTTKPAAAV
AAATGCGSELASNIAGLPQGQIDTEGHDLQGSGGGFGCGGPATQETSCGG
ASFASLDSSSFFAITQRPPSSTSDLADLTHPDLERMLLRQSPETVPAAAG
GMQMTMITGVAQQQHHRTQTTVNPGPLRDFDTFDIRLVDGSGSDDFPPVP
VVGGLCGGFVGGGYESSDESSGENAGRHRCGIGLDNTNREPSLTRRTSSR
SNGSRSPCYTSALSNTSEKFCSGRQGAPRTAYTEGTMKKTKCDGGQPTLS
GAAGGVHRPTHLSYKPRSTAYTARIFGSVLTSLYIFPYAPKAGENTSAGP
HCEVATVVLDHVSSGYETPPSGSGSGLSYGLSSLAAYRGAISRGRGGRGS
GGGRGRGGRGRTGGRGGVAVDGNDTGGGPRQNNVGTGAVASSRGASPRSS
RRSTSPPRSRAPNTSSVGRAAGLGGALRDASRGGLRGRGGGRGRGRGNGR
GGGGAAAAKTTAAAGTSPRHRVVKPIGVATESSTAGRGRGSGVDGDTVST
GGGEDGSGQERCSRMVSSERQEHAQGISAPSLLHGHPLARHAPAGQRQVR
AASLDERLTERIRSRYGAEGNAYFPLAHAQQQQEHTKRQEEPKYGGAATP
AGDAGVVAAAPEAAAAAAAAGQRDTGGIDDETAPRDADDAIDGELQHEIR
NGTLFGIDFLGGIGDLDEFDLADAAAAAASAASASDGEEEDDDGGGGGRH
KGFGDSEPDQSDTGAKEEANGYRDDGDDDGYSGSGSDANSDANSPGRSGL
RGGGGSEEAAMMSGEENYGGLLGAYEAGEDDGEDEFENHLTTAKQAKRRG
VGGNGGTYRRVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGKEGCFQC
SRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTS
SPCRFAFADGQSKTEHYHCRTPGCEYASKTMDKLMSHRQEHHPESARAIR
PAAAAATATKQQQQQQPLQQQKRAVPPQQTGGKGTLQHQQQRHKKPKLEA
EAWPFLSHAPVAPPAVGPEF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf