prot_L-elsbetiae_contig13398.2616.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13398.2616.1
Unique Nameprot_L-elsbetiae_contig13398.2616.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length88
Homology
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BLAST of mRNA_L-elsbetiae_contig13398.2616.1 vs. uniprot
Match: A0A6H5JXT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXT4_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 9.520e-18
Identity = 42/84 (50.00%), Postives = 52/84 (61.90%), Query Frame = 0 
Query:    1 LAQDGRSFVASGTGGQRQKGYKCSGYTGGCPVNVRAYRKNGGEPWKVHTVVLAHIGGCSGGNTRGRSAAFGPTAKRALNDNPNL 84
             A DGRSFVA    G RQK Y+CSG+TGGC   VRAY+   G  WKVHT+  AH   CSGG T+GR+ A    A   + D+ ++
Sbjct:    9 FAADGRSFVAGKNSGGRQKTYRCSGHTGGCKAQVRAYKGADGV-WKVHTIDAAHTD-CSGGITKGRTVALQHLASTVVKDHSSM 90
[Close]
BLAST of mRNA_L-elsbetiae_contig13398.2616.1 vs. uniprot
Match: A0A6H5K747_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K747_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.540e-17
Identity = 44/86 (51.16%), Postives = 54/86 (62.79%), Query Frame = 0 
Query:    1 LAQDGRSFVASGTGGQRQKGYKCSGYTGGCPVNVRAYRKNGGEPWKVHTVVLAHIGGCSGGNTRGRSAAFGPTAKRALNDNPNLRG 86
             A DGRSFVAS   G RQK Y+ +G+TGGC   VR Y+   G  WKVHT+  AH   CSGGNT+GR+AA    A  A+ D+  + G
Sbjct:   20 FAADGRSFVASKNSGGRQKTYRGAGHTGGCKAQVRGYKGADGV-WKVHTIDAAHTD-CSGGNTKGRTAALQHLASTAVKDHSPMNG 103
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13398.2616.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXT4_9PHAE9.520e-1850.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K747_9PHAE1.540e-1751.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13398contigL-elsbetiae_contig13398:4762..5025 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13398.2616.1mRNA_L-elsbetiae_contig13398.2616.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13398 4762..5025 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13398.2616.1 ID=prot_L-elsbetiae_contig13398.2616.1|Name=mRNA_L-elsbetiae_contig13398.2616.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=88bp
LAQDGRSFVASGTGGQRQKGYKCSGYTGGCPVNVRAYRKNGGEPWKVHTV
VLAHIGGCSGGNTRGRSAAFGPTAKRALNDNPNLRGT*
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