prot_L-elsbetiae_contig13390.2614.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13390.2614.1
Unique Nameprot_L-elsbetiae_contig13390.2614.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length235
Homology
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 1.540e-29
Identity = 88/223 (39.46%), Postives = 109/223 (48.88%), Query Frame = 0
Query:   44 QPSTVTDVGLETLWRGLQACLRFDED---NDXXXXXXXXXXXXXXXXXXXXSVPHQEALPAARGGNSCYPLGDPSDGNDSTPAATWRQ-------GGGEIS--------WLATVAGGGGG----------NPLQAALDISSADAGFSVYELPGSRSGG---ERSGGGGVRRKNACIVCLSRKVNVTLVPCGHHCCCMPCTE-KFELCPVCRLRITQKIKTIDG 234
            QPS  + +G+   WRGLQACLR DED   +D                        ++A     GG SCYP+G  +D N   PA  WR        GGG  S        +LA +  G             +PLQAAL++S  +AG+S+YEL   + G           ++ KNACIVC  R VN T VPCGHHCCCMPC E K  LCPVC + I +KIKTI  
Sbjct:  681 QPSAASGMGMAPFWRGLQACLRNDEDKHDDDRGRGRDRAPLEGTSHPEPKGRGGSRDAGGGDDGGKSCYPVGSSADRN---PA--WRSNAPGSAVGGGNGSGGVEGCDTFLAGMRAGAXXXXXXXXXXDRDPLQAALEMSVVEAGYSIYELTTGKDGSGXXXXXXXXXMKGKNACIVCFDRPVNCTFVPCGHHCCCMPCAESKLNLCPVCGVAIDKKIKTISA 898          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE)

HSP 1 Score: 125 bits (313), Expect = 3.940e-29
Identity = 84/223 (37.67%), Postives = 107/223 (47.98%), Query Frame = 0
Query:   44 QPSTVTDVGLETLWRGLQACLRFDEDNDXXXXXXXXXXXXXXXXXXXXSVPHQEALPAAR-------GGNSCYPLGDPSDGN----DSTPAATWRQGGG-----------EISWLATVAGGGGG------NPLQAALDISSADAGFSVYELP---GSRSGGERSGGGGVRRKNACIVCLSRKVNVTLVPCGHHCCCMPCTEK-FELCPVCRLRITQKIKTIDG 234
            QPS  + +G+   WRGLQACLR DED                X     S P  +    +R       GG SCYP+G  +D +     +TP++    G G           + S++   AG G        +P QAAL++S A+AG+S+YEL    G                 ACIVC  R VN T +PCGHHCCCMPC E  F LCPVCR+ I +KIKTI  
Sbjct:  751 QPSAASGMGMAPFWRGLQACLRNDEDKHDDDRGRGRDRAPLEXGYMGTSHPEPKERGGSRDAGGDDDGGKSCYPVGSSADRSPAWRSNTPSSAVGGGNGSSGVEGSDTFLDTSFVGMRAGAGXXXXTGDRDPFQAALEMSVAEAGYSIYELTSGKGXXXXXXXXXXXXXXXXXACIVCFDRPVNCTFMPCGHHCCCMPCAESMFNLCPVCRVAIDKKIKTISA 973          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: D8LDN0_ECTSI (Zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDN0_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.360e-14
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  185 NACIVCLSRKVNVTLVPCGHHCCCMPCTEKFELCPVCRLRITQKIKTID 233
            N CIVC  RKV+ TLVPCGHHCCC+ C  +FE CPVCR  + QKI+ I 
Sbjct:  113 NTCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAIS 161          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A6H5KTY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTY3_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 5.150e-14
Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  181 VRRKNACIVCLSRKVNVTLVPCGHHCCCMPCTEKFELCPVCRLRITQKIKTI 232
            V   N CIVC   +V+ TLVPCGHHCCC+ C  KF LCPVCR  +T KIKTI
Sbjct:  738 VETDNCCIVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKTI 789          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: D7FYF6_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF6_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 2.040e-13
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0
Query:  188 IVCLSRKVNVTLVPCGHHCCCMPCTEKFELCPVCRLRITQKIKTIDG 234
            +VC   +V+ TLVPCGHHCCC+ C  KF LCPVCR  +T KIKTI  
Sbjct:   39 LVCFDNEVDCTLVPCGHHCCCITCASKFSLCPVCRTTVTHKIKTIPS 85          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 5.580e-13
Identity = 31/49 (63.27%), Postives = 36/49 (73.47%), Query Frame = 0
Query:  185 NACIVCLSRKVNVTLVPCGHHCCCMPCTEKFELCPVCRLRITQKIKTID 233
            N CIVC  RKV+ TLVPCGHHCCC+ C  +FE CPVCR  + QKI+ I 
Sbjct:  629 NMCIVCFERKVDCTLVPCGHHCCCLTCAAQFEQCPVCRADVEQKIRAIS 677          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A0K9P4V2_ZOSMR (RING-type E3 ubiquitin transferase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P4V2_ZOSMR)

HSP 1 Score: 64.7 bits (156), Expect = 1.570e-8
Identity = 22/45 (48.89%), Postives = 32/45 (71.11%), Query Frame = 0
Query:  187 CIVCLSRKVNVTLVPCGHHCCCMPCTEKFELCPVCRLRITQKIKT 231
            C++CL ++ N   VPCGH CCCM C+ +  LCP+CR R+ Q ++T
Sbjct:  324 CVICLEQEYNAVFVPCGHMCCCMSCSSRLSLCPICRGRLKQIVRT 368          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A7I0YRF4_DANPL (E3 ubiquitin-protein ligase LRSAM1-like n=2 Tax=Danaus TaxID=13036 RepID=A0A7I0YRF4_DANPL)

HSP 1 Score: 63.9 bits (154), Expect = 3.910e-8
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  187 CIVCLSRKVNVTLVPCGHHCCCMPCTE-KFELCPVCRLRITQKIKTI 232
            C+VC+  K  V  VPCGH CCC PC++ + E CP+CR+ I +KIK I
Sbjct:  653 CVVCMDSKSEVVFVPCGHMCCCQPCSQNELETCPMCRINIERKIKVI 699          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A212F3Y0_DANPL (Metalloendopeptidase n=1 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A212F3Y0_DANPL)

HSP 1 Score: 63.9 bits (154), Expect = 4.360e-8
Identity = 25/47 (53.19%), Postives = 33/47 (70.21%), Query Frame = 0
Query:  187 CIVCLSRKVNVTLVPCGHHCCCMPCTE-KFELCPVCRLRITQKIKTI 232
            C+VC+  K  V  VPCGH CCC PC++ + E CP+CR+ I +KIK I
Sbjct: 1179 CVVCMDSKSEVVFVPCGHMCCCQPCSQNELETCPMCRINIERKIKVI 1225          
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Match: A0A2G9G1Z6_9LAMI (RING-type E3 ubiquitin transferase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9G1Z6_9LAMI)

HSP 1 Score: 63.2 bits (152), Expect = 4.620e-8
Identity = 22/49 (44.90%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  183 RKNACIVCLSRKVNVTLVPCGHHCCCMPCTEKFELCPVCRLRITQKIKT 231
            + + C++C+ R+ N  L+PCGH CCCMPC+   + CP+CR +I Q ++T
Sbjct:  281 KPDLCVICVEREYNSVLLPCGHMCCCMPCSLCLKTCPLCRRQIAQIVRT 329          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13390.2614.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYF4_ECTSI1.540e-2939.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUU5_9PHAE3.940e-2937.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LDN0_ECTSI1.360e-1463.27Zinc finger protein n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KTY3_9PHAE5.150e-1463.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYF6_ECTSI2.040e-1361.70RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KTC5_9PHAE5.580e-1363.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0K9P4V2_ZOSMR1.570e-848.89RING-type E3 ubiquitin transferase n=1 Tax=Zostera... [more]
A0A7I0YRF4_DANPL3.910e-853.19E3 ubiquitin-protein ligase LRSAM1-like n=2 Tax=Da... [more]
A0A212F3Y0_DANPL4.360e-853.19Metalloendopeptidase n=1 Tax=Danaus plexippus plex... [more]
A0A2G9G1Z6_9LAMI4.620e-844.90RING-type E3 ubiquitin transferase n=1 Tax=Handroa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 174..232
e-value: 2.2E-13
score: 51.4
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 184..227
e-value: 6.7E-10
score: 38.7
NoneNo IPR availablePANTHERPTHR14879CASPASE REGULATOR, RING FINGER DOMAIN-CONTAININGcoord: 171..230
NoneNo IPR availablePANTHERPTHR14879:SF5E3 UBIQUITIN-PROTEIN LIGASE CBLAcoord: 171..230
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.67
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 186..228
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 187..222
score: 10.822

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13390contigL-elsbetiae_contig13390:783..3160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13390.2614.1mRNA_L-elsbetiae_contig13390.2614.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13390 44..3481 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13390.2614.1 ID=prot_L-elsbetiae_contig13390.2614.1|Name=mRNA_L-elsbetiae_contig13390.2614.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=235bp
MGFRRVWWLKLARWSCSCVWCACRVPGDAGGMFLPAKNAWYSLQPSTVTD
VGLETLWRGLQACLRFDEDNDDSNVGGGGGGSVSGGGGGGGSVPHQEALP
AARGGNSCYPLGDPSDGNDSTPAATWRQGGGEISWLATVAGGGGGNPLQA
ALDISSADAGFSVYELPGSRSGGERSGGGGVRRKNACIVCLSRKVNVTLV
PCGHHCCCMPCTEKFELCPVCRLRITQKIKTIDG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING