mRNA_L-elsbetiae_contig1339.2611.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1339.2611.1
Unique NamemRNA_L-elsbetiae_contig1339.2611.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: D7G825_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G825_ECTSI)

HSP 1 Score: 333 bits (855), Expect = 5.670e-114
Identity = 161/165 (97.58%), Postives = 163/165 (98.79%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQ 495
            GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGT GLPS ALAQFQGPALL+FNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETV+RYPDQ
Sbjct:    9 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTEGLPSLALAQFQGPALLVFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVKRYPDQ 173          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A7R9U5N2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5N2_9STRA)

HSP 1 Score: 319 bits (818), Expect = 1.790e-105
Identity = 157/248 (63.31%), Postives = 191/248 (77.02%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTS-KGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEPK 741
            G+DFGQKIDL VRIREILRNYPEGTSILKE++QNADDAGA  V+ CLD R+HGTA L  P++A  QG ALL +N  +FT+ DF+SIQRIGDSLKK T+ K  KTGRFG+GFNSVYHLTE P FVSA +   FDPQAKFLP ++P NPGK +D  ++ E + R+ DQF+PL AFG +LRS F  TLFR+PLRT +QA+ SRLSRQAH    ++ LL    RE+A MLLFLK+VE + V+EW+    EP+
Sbjct:   72 GDDFGQKIDLCVRIREILRNYPEGTSILKEILQNADDAGAHAVKFCLDKRRHGTATLAQPSVAGLQGAALLAYNSAMFTERDFQSIQRIGDSLKKSTTGKNTKTGRFGVGFNSVYHLTETPMFVSARRVVMFDPQAKFLPGIDPTNPGKSLDVERHAEVIARFEDQFAPLRAFGADLRSEFQGTLFRYPLRTAQQAAESRLSRQAHDEDSMKALLVQMGREAASMLLFLKHVETVEVWEWSRDGLEPE 319          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A7S0I7X4_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7X4_MICPS)

HSP 1 Score: 297 bits (760), Expect = 4.880e-98
Identity = 147/250 (58.80%), Postives = 182/250 (72.80%), Query Frame = 1
Query:    4 EDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEPKQVSR 753
            +DFGQK+DLT R+REIL NYPEGTSILKELVQNADDAGAR V++CLD R HGT  L    LAQFQGP+LL+FND  F ++DF SI RIGDS+K+  ++ GKTGRFG+GFNSVYHLT++P+FVS      FDP   FLPNV  ANPGK VDF+   +   R+PDQ++P  AFGC++R  F  T+FRFPLRT  QA  S+LS+  +    +R LL AFARE    +L+LKNVE + V EW  G   P+ ++R
Sbjct:   11 DDFGQKVDLTARLREILLNYPEGTSILKELVQNADDAGARTVKVCLDERSHGTDTLAYEGLAQFQGPSLLVFNDSTFKESDFESISRIGDSVKR--TQVGKTGRFGVGFNSVYHLTDMPSFVSGRHAVFFDPHCAFLPNVTAANPGKRVDFVAN-DVFSRHPDQWAPFVAFGCDVRGEFAGTMFRFPLRTEAQAGRSKLSKAHYTPESVRALLLAFAREKTLDMLYLKNVETVEVLEWGAGDEAPRVMAR 257          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A485KN43_9STRA (Aste57867_9568 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KN43_9STRA)

HSP 1 Score: 320 bits (820), Expect = 8.200e-97
Identity = 151/249 (60.64%), Postives = 189/249 (75.90%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEPKQV 747
            G+DFGQKIDLTVRIREILRNYPEGTS+LKE+VQNADDAGA E+  CLD+R H T  L    LA FQGP+L+++N+  FTD DF+SIQ+IGDSLKK++S G KTGRFGIGFNSVYHLT+LP FVS  +   FDP A  LPNVNP+NPGKM+DF+     +  +P+QF+P N FGC+L  NFP T FR PLRTP+QA +SRLS +   V  I+ LLQ F+ E+  +LLFL++V ++S+ EW   +  PK +
Sbjct:    8 GDDFGQKIDLTVRIREILRNYPEGTSVLKEMVQNADDAGATEISFCLDMRYHSTDQLVYSKLADFQGPSLMVYNNAQFTDADFQSIQKIGDSLKKESSNGWKTGRFGIGFNSVYHLTDLPTFVSGRRIVFFDPHACHLPNVNPSNPGKMIDFVVQSNLLGEFPNQFTPFNGFGCDLTKNFPGTTFRLPLRTPDQAQISRLSSKNQTVESIQHLLQEFSEETKVVLLFLRHVSKISIMEWHATEDAPKTL 256          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A7S1TYE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA)

HSP 1 Score: 318 bits (814), Expect = 5.470e-96
Identity = 155/250 (62.00%), Postives = 185/250 (74.00%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDT-SKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEPKQV 747
            G+DFGQKIDL VRIREILRNYPEGTSILKE++QNADDAGA EVR CLD R H T  L +P++A  QG +LL FN   FTD DFRSIQRIGDSLKK    K  KTGRFG+GFNSVYHLTE+P FVS  +   FDPQA++LP ++P NPGK +D  ++ E + RY DQF PL AFG +LR+ F  T+FR+PLRT  QA  SRLSRQAH +  +R LL     E+A MLLFLKNVER+ ++EW  G   P+ +
Sbjct:    8 GDDFGQKIDLCVRIREILRNYPEGTSILKEILQNADDAGAGEVRFCLDARSHATGSLAAPSVAALQGASLLAFNSAAFTDVDFRSIQRIGDSLKKAAPGKNTKTGRFGVGFNSVYHLTEVPMFVSGRRIVMFDPQARYLPGIDPTNPGKSLDVERHAELIARYRDQFEPLRAFGADLRTPFDGTVFRYPLRTAAQARESRLSRQAHSLESMRGLLAQLGAEAASMLLFLKNVERIGIYEWRAGAQAPECI 257          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: W7U1E4_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E4_9STRA)

HSP 1 Score: 318 bits (814), Expect = 5.570e-96
Identity = 162/261 (62.07%), Postives = 192/261 (73.56%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNA-FGCNL---------RSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEPKQVSR 753
            G+DFGQK+DLT RIREILRNYPEGTSI KEL+QNADDAGAREVRL LD RQH T  L SP++A  QGPALL +ND  F+D DF SIQRIGDSLK+  S+G KTGRFG G+N++YHLTE+P FVS      FDPQA +LPNVNPANPGKM+DFIK+ + +  YPDQF P    +GCN+          S + ATLFRFPLRTP QA  SRLS+Q H V  +R  L+ FA E++ MLLFLKNVE++SV+E     +   Q SR
Sbjct:    5 GDDFGQKVDLTARIREILRNYPEGTSIFKELLQNADDAGAREVRLVLDTRQHPTDRLASPSMASLQGPALLCWNDAEFSDLDFESIQRIGDSLKRAESQGAKTGRFGQGYNAIYHLTEVPIFVSGQNIVMFDPQASYLPNVNPANPGKMIDFIKHRQVLEAYPDQFLPFQGIYGCNIVKGGDDNKSGSPYRATLFRFPLRTPLQAETSRLSKQVHTVESMRAQLRMFASEASEMLLFLKNVEQISVWECMATAATATQESR 265          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: W2NNW2_PHYPR (UBA domain-containing protein n=1 Tax=Phytophthora parasitica TaxID=4792 RepID=W2NNW2_PHYPR)

HSP 1 Score: 317 bits (812), Expect = 9.740e-96
Identity = 153/246 (62.20%), Postives = 182/246 (73.98%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEP 738
            G+DFGQKIDLTVRIREILRNYPEGTSI KE+VQNADDAGA EV LCLD RQH   GL    LA FQGP+LL+ N+  F+D DF+SIQRIGDSLKKD SKG KTGRFG+GFNSVYH+T+LPAFVS  +   FDPQA  LPNVNP+NPGKM+D+I +P  V  +PDQ SP   FGCN    F  T+FR  LRT EQA  S+LS +A     +  +L+ FA     +LLFL+NV ++S++EW  G+  P
Sbjct:    9 GDDFGQKIDLTVRIREILRNYPEGTSIFKEMVQNADDAGATEVNLCLDYRQHAATGLAYEKLASFQGPSLLVHNNATFSDADFQSIQRIGDSLKKDNSKGWKTGRFGVGFNSVYHVTDLPAFVSGSQLVFFDPQACHLPNVNPSNPGKMIDYIAHPNLVSNFPDQISPFRCFGCNFSEPFSGTIFRLALRTEEQAQRSKLSNRAQTPAKMAEMLKEFADSLPTVLLFLRNVCKISIWEWRAGEDTP 254          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A1W0A4K0_9STRA (UBA domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4K0_9STRA)

HSP 1 Score: 316 bits (810), Expect = 1.840e-95
Identity = 151/246 (61.38%), Postives = 183/246 (74.39%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEP 738
            GEDFGQKIDLTVRIREILRNYPEGTS+LKE+VQNADDAGA E+  CLD+R H +  L    LA FQGP+L++ N+  FTD DF SIQRIGDSLKKD S+G KTGRFGIGFNSVYH+T+LP FVS      FDP A +LPNVNP+NPGKM++F+   + + +YPDQF P   FGC+L+  F  T+FR PLRTPE A  S+L+ +   V  I+ LL A  +ES  +LLFL+NV  +SV  W  GQS+P
Sbjct:    9 GEDFGQKIDLTVRIREILRNYPEGTSVLKEMVQNADDAGATEISFCLDMRTHSSNQLAYTKLATFQGPSLMVHNNARFTDADFESIQRIGDSLKKDNSQGWKTGRFGIGFNSVYHITDLPTFVSGSHIVMFDPHANYLPNVNPSNPGKMINFMTRRDLLEQYPDQFRPFEGFGCDLKKPFDGTIFRLPLRTPEHAKESKLTSRPQTVDSIKQLLHALVQESTMILLFLRNVTSISVLHWYDGQSDP 254          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A6G0WJ92_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJ92_9STRA)

HSP 1 Score: 316 bits (809), Expect = 2.590e-95
Identity = 149/246 (60.57%), Postives = 187/246 (76.02%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEP 738
            G+DFGQKIDLTVRIREILRNYPEGTS+LKE+VQNADDAGA E+  CLD+R H    L    + +FQGP+L++ N+  FT+ DF+SIQRIGDSLKKD+SK  KTGRFGIGFNSVYHLT+LP FVS  +   FDPQA  LPN+NP+NPGKM+DF+   + + ++P+QF P   FGC+L S F  T FR PLRT +QA  S+LS +A    DIR+LL  FA ES  +LLFL+++ ++S+FEW P +S P
Sbjct:    8 GDDFGQKIDLTVRIREILRNYPEGTSVLKEMVQNADDAGATEISFCLDMRNHAVDNLAYTKMTEFQGPSLMVHNNATFTEVDFQSIQRIGDSLKKDSSKEWKTGRFGIGFNSVYHLTDLPTFVSGNRIVLFDPQACHLPNINPSNPGKMIDFVSRKDLIDQFPNQFHPFKGFGCDLTSYFHGTTFRLPLRTEDQARQSKLSSRARHCEDIRLLLDNFAVESKIILLFLRHLTKISIFEWKPNESAP 253          
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Match: A0A329RM56_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RM56_9STRA)

HSP 1 Score: 316 bits (809), Expect = 2.600e-95
Identity = 152/246 (61.79%), Postives = 183/246 (74.39%), Query Frame = 1
Query:    1 GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLRQHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKGGKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMVDFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRLSRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEP 738
            G+DFGQKIDLTVRIREILRNYPEGTSI KE+VQNADDAGA EV LCLD RQH   GL    LA FQGP+LL+ N+  F+D DF+SIQRIGDSLKKD SKG KTGRFG+GFNSVYH+T+LPAFVS  +   FDPQA  LPNVNP+NPGKM+D+I +P+ V  +PDQ +P   FGCN    F  T+FR  LRT EQA  S+LS +A     +  +L+ FA     +LLFL+NV ++S++EW  G+  P
Sbjct:    9 GDDFGQKIDLTVRIREILRNYPEGTSIFKEMVQNADDAGATEVNLCLDYRQHAATGLAYEKLASFQGPSLLVHNNATFSDADFQSIQRIGDSLKKDNSKGWKTGRFGVGFNSVYHVTDLPAFVSGSQLVFFDPQACHLPNVNPSNPGKMIDYIAHPDLVSNFPDQINPFRCFGCNFSEPFLGTIFRLALRTEEQAQRSKLSNRAQTPAKMAEMLKEFADSLPTVLLFLRNVCKISIWEWRAGEDAP 254          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1339.2611.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G825_ECTSI5.670e-11497.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7R9U5N2_9STRA1.790e-10563.31Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S0I7X4_MICPS4.880e-9858.80Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A485KN43_9STRA8.200e-9760.64Aste57867_9568 protein n=1 Tax=Aphanomyces stellat... [more]
A0A7S1TYE3_9STRA5.470e-9662.00Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
W7U1E4_9STRA5.570e-9662.07Ubiquitin-associated/translation elongation factor... [more]
W2NNW2_PHYPR9.740e-9662.20UBA domain-containing protein n=1 Tax=Phytophthora... [more]
A0A1W0A4K0_9STRA1.840e-9561.38UBA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A6G0WJ92_9STRA2.590e-9560.57Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A329RM56_9STRA2.600e-9561.79Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1339contigL-elsbetiae_contig1339:4754..6710 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score332.4
Seed ortholog evalue1.8e-88
Seed eggNOG ortholog2880.D7G825
KEGG koko:K17592
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006457,GO:0008150,GO:0009987,GO:0030424,GO:0030425,GO:0030544,GO:0031072,GO:0036477,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044087,GO:0044424,GO:0044444,GO:0044463,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051087,GO:0051128,GO:0051129,GO:0065007,GO:0070628,GO:0070852,GO:0090083,GO:0090084,GO:0097447,GO:0097458,GO:0120025,GO:0120038
EggNOG free text desc.negative regulation of inclusion body assembly
EggNOG OGs28IDA@1,2QQPY@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009
Exons4
Model size756
Cds size756
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1339.2611.1prot_L-elsbetiae_contig1339.2611.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1339 4754..6710 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815511.2368681-CDS-L-elsbetiae_contig1339:4753..50141622815511.2368681-CDS-L-elsbetiae_contig1339:4753..5014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 4754..5014 -
1691682934.2539604-CDS-L-elsbetiae_contig1339:4753..50141691682934.2539604-CDS-L-elsbetiae_contig1339:4753..5014Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 4754..5014 -
1622815511.2500315-CDS-L-elsbetiae_contig1339:5371..55561622815511.2500315-CDS-L-elsbetiae_contig1339:5371..5556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 5372..5556 -
1691682934.270907-CDS-L-elsbetiae_contig1339:5371..55561691682934.270907-CDS-L-elsbetiae_contig1339:5371..5556Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 5372..5556 -
1622815511.2602162-CDS-L-elsbetiae_contig1339:6010..60691622815511.2602162-CDS-L-elsbetiae_contig1339:6010..6069Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 6011..6069 -
1691682934.2819154-CDS-L-elsbetiae_contig1339:6010..60691691682934.2819154-CDS-L-elsbetiae_contig1339:6010..6069Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 6011..6069 -
1622815511.2741199-CDS-L-elsbetiae_contig1339:6459..67101622815511.2741199-CDS-L-elsbetiae_contig1339:6459..6710Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 6460..6710 -
1691682934.2897618-CDS-L-elsbetiae_contig1339:6459..67101691682934.2897618-CDS-L-elsbetiae_contig1339:6459..6710Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1339 6460..6710 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1339.2611.1

>prot_L-elsbetiae_contig1339.2611.1 ID=prot_L-elsbetiae_contig1339.2611.1|Name=mRNA_L-elsbetiae_contig1339.2611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
GEDFGQKIDLTVRIREILRNYPEGTSILKELVQNADDAGAREVRLCLDLR
QHGTAGLPSPALAQFQGPALLMFNDGVFTDTDFRSIQRIGDSLKKDTSKG
GKTGRFGIGFNSVYHLTELPAFVSAGKWCSFDPQAKFLPNVNPANPGKMV
DFIKYPETVRRYPDQFSPLNAFGCNLRSNFPATLFRFPLRTPEQASVSRL
SRQAHGVTDIRVLLQAFARESAGMLLFLKNVERMSVFEWAPGQSEPKQVS
R*
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mRNA from alignment at L-elsbetiae_contig1339:4754..6710-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1339.2611.1 ID=mRNA_L-elsbetiae_contig1339.2611.1|Name=mRNA_L-elsbetiae_contig1339.2611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1957bp|location=Sequence derived from alignment at L-elsbetiae_contig1339:4754..6710- (Laminarionema elsbetiae ELsaHSoW15)
GGCGAGGACTTCGGTCAGAAGATCGACCTGACGGTGCGAATACGCGAGAT TCTCCGCAACTACCCCGAGGGAACATCGATCCTCAAGGAACTCGTGCAGA ACGCAGACGATGCGGGTGCACGGGAGGTGCGGTTGTGTCTCGACCTCCGG CAACACGGAACGGCCGGGCTCCCCAGTCCTGCTCTTGCTCAGTTCCAGGG GCCGGCGTTGCTGATGTTCAACGACGGGGTGTTTACCGACACGGACTTCA GGTAGGCTGCAGTTTTAGTCATGGTTTTGTTTTCGCAGATTCAACGTCCG CGCAGCGCGGCCAGAGCTACTGCTATGAGTGTTGGGCGAATACAGGACAA CGATGCAAAACCCCCTCTCTCGCTGTGTGTGTGTGTGTGTGTGTGAATGC TCTGAGGTACCCTTAACGTTGCGCTTGAAGCCAACGCGAAGAGCGGGATT GGTCATTGAGAAATGTTTGTGGGAGTAAACAGAGTCTAAATAGTGTTTGG CGCGCCCAAGACGCTGCTGGCGCTACCGGTGCAACATGTTTTTTTATGCC GCCCATATCTTGCTTGCTGTGATTGCGGTCGGAGTCTGCTACTATGCCGG TGCTGTGCACGCTGCTTCTGCTGTTTACTGCTGTTGTGCAGGTCTATCCA GAGAATAGGAGACTCTCTGAAGAAGGACACCTCCAAGGGCGGGAAAACAG GTCTGCTTGATTGCCGTCCGTTGCCCATCTTATGTTGGGGTGCACACAAC ATCCACTGAGCTAGCAGTCAGCGGCTGACTGTTGGCAGAGTGGATATTGG GTACACCTTATCACCTAGCTATAACGTTAAATATGCTTATTTCATGAGCA GTTATGGGCTGTGAGCGGCTGTGCAGCAAAGTCTTCTCATGGTTCTGTGA CGCCTGCCTGACACTTGACCCGAAGCGAAGACGGCAACGCGCTGGGTGTC TCCTTGATTCTTGCTCGCTTGTATCGACACACCCATATGCATGTAGCTTT GGGCTCTCTCACCCGCTGATTTTTTCCACACCAGCGACGGATTCTCGTGT CGCTTCAGCACTCGGTTTTCGTTGCTTCCTCTTGACCCTCACTTGTTGCA CCCTGCCCCGCCATGCTTCGCTGCCTTGCTTTGCTTTGCGCTTTGTGCGC GAAGGTCGCTTTGGGATAGGTTTCAACTCGGTCTATCATCTTACGGAGCT CCCGGCCTTTGTTTCCGCTGGCAAGTGGTGCAGTTTCGACCCGCAGGCCA AGTTCCTCCCGAATGTCAACCCTGCGAACCCGGGGAAGATGGTGGACTTC ATCAAGTACCCAGAGACCGTTCGGCGTTACCCAGACCAGGTTTGCTTGCG CTGGCGTTCGTTGCTGACCGATATCGACGGTCCACAGGGGGCATTGGAAA AGACGGATGCTTCTCTTGAGCCTGCATTCGTAGCGTTAAAGTGTATTTTG GCCTCAACCGGGTGGTCCCACGTCTAGTTGGTGGTGTGTCCAACACCGCC TTCCGTGCCGTATGCTGTAAACTAGTGTTGGGATTGGGATTGTACGAGGG CGGATCCCAAATGCTGTCAGCCATTAATATCCGTGAAGCCGCTGAGAGAC GAACTCCTGTCTCGCTTCATATACCCCCCCCCCTACAGCATGATAACCCC TTGTCGTCTCGCCGCTCCCTGCTTCCGCCACCGCACGTCATCGCAGTTCT CCCCGTTGAACGCGTTCGGGTGCAACCTGCGGTCCAATTTTCCCGCGACA CTGTTTCGGTTCCCGCTGAGGACGCCGGAGCAGGCGTCGGTGTCTCGGCT CAGCAGGCAGGCCCACGGGGTCACGGACATACGCGTCCTCCTGCAGGCTT TCGCCAGAGAATCGGCGGGGATGCTGCTGTTCCTCAAGAACGTCGAGCGC ATGAGCGTGTTCGAATGGGCTCCTGGCCAGAGCGAGCCGAAGCAGGTGAG CCGGTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1339:4754..6710-

>mRNA_L-elsbetiae_contig1339.2611.1 ID=mRNA_L-elsbetiae_contig1339.2611.1|Name=mRNA_L-elsbetiae_contig1339.2611.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1512bp|location=Sequence derived from alignment at L-elsbetiae_contig1339:4754..6710- (Laminarionema elsbetiae ELsaHSoW15)
GGCGAGGACTTCGGTCAGAAGATCGACCTGACGGTGCGAATACGCGAGAT
TCTCCGCAACTACCCCGAGGGAACATCGATCCTCAAGGAACTCGTGCAGA
ACGCAGACGATGCGGGTGCACGGGAGGTGCGGTTGTGTCTCGACCTCCGG
CAACACGGAACGGCCGGGCTCCCCAGTCCTGCTCTTGCTCAGTTCCAGGG
GCCGGCGTTGCTGATGTTCAACGACGGGGTGTTTACCGACACGGACTTCA
GGGCGAGGACTTCGGTCAGAAGATCGACCTGACGGTGCGAATACGCGAGA
TTCTCCGCAACTACCCCGAGGGAACATCGATCCTCAAGGAACTCGTGCAG
AACGCAGACGATGCGGGTGCACGGGAGGTGCGGTTGTGTCTCGACCTCCG
GCAACACGGAACGGCCGGGCTCCCCAGTCCTGCTCTTGCTCAGTTCCAGG
GGCCGGCGTTGCTGATGTTCAACGACGGGGTGTTTACCGACACGGACTTC
AGGTCTATCCAGAGAATAGGAGACTCTCTGAAGAAGGACACCTCCAAGGG
CGGGAAAACAGGTCTATCCAGAGAATAGGAGACTCTCTGAAGAAGGACAC
CTCCAAGGGCGGGAAAACAGGTCGCTTTGGGATAGGTTTCAACTCGGTCT
ATCATCTTACGGAGCTCCCGGCCTTTGTTTCCGCTGGCAAGTGGTGCAGT
TTCGACCCGCAGGCCAAGTTCCTCCCGAATGTCAACCCTGCGAACCCGGG
GAAGATGGTGGACTTCATCAAGTACCCAGAGACCGTTCGGCGTTACCCAG
ACCAGGTCGCTTTGGGATAGGTTTCAACTCGGTCTATCATCTTACGGAGC
TCCCGGCCTTTGTTTCCGCTGGCAAGTGGTGCAGTTTCGACCCGCAGGCC
AAGTTCCTCCCGAATGTCAACCCTGCGAACCCGGGGAAGATGGTGGACTT
CATCAAGTACCCAGAGACCGTTCGGCGTTACCCAGACCAGTTCTCCCCGT
TGAACGCGTTCGGGTGCAACCTGCGGTCCAATTTTCCCGCGACACTGTTT
CGGTTCCCGCTGAGGACGCCGGAGCAGGCGTCGGTGTCTCGGCTCAGCAG
GCAGGCCCACGGGGTCACGGACATACGCGTCCTCCTGCAGGCTTTCGCCA
GAGAATCGGCGGGGATGCTGCTGTTCCTCAAGAACGTCGAGCGCATGAGC
GTGTTCGAATGGGCTCCTGGCCAGAGCGAGCCGAAGCAGGTGAGCCGGTG
ATTCTCCCCGTTGAACGCGTTCGGGTGCAACCTGCGGTCCAATTTTCCCG
CGACACTGTTTCGGTTCCCGCTGAGGACGCCGGAGCAGGCGTCGGTGTCT
CGGCTCAGCAGGCAGGCCCACGGGGTCACGGACATACGCGTCCTCCTGCA
GGCTTTCGCCAGAGAATCGGCGGGGATGCTGCTGTTCCTCAAGAACGTCG
AGCGCATGAGCGTGTTCGAATGGGCTCCTGGCCAGAGCGAGCCGAAGCAG
GTGAGCCGGTGA
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