mRNA_L-elsbetiae_contig1339.2610.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A6H5K4B9_9PHAE (UBA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4B9_9PHAE) HSP 1 Score: 249 bits (637), Expect = 1.350e-73 Identity = 133/181 (73.48%), Postives = 140/181 (77.35%), Query Frame = 1 Query: 94 MKFVPWAGVAARLSTTEVVSSA----------------GEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGGGEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 MKFVPWAGVAARL+TTEV + GS LPP PRGAAYCFLPLPV TGLPVHVNG RDIWSGSDMVGDGELRANWNKALVEELAASCYTRVL+AAKA+LGGG AYEALWPTG TAEG MWRGLADSLMRLV+PLPLL+TRS +A GGWV PQKCVV Sbjct: 1 MKFVPWAGVAARLATTEVAPPSVFPAEGGGXXXXXXXXXXGSKRLPPAPRGAAYCFLPLPVLTGLPVHVNG--------RDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLVAAKASLGGGAAYEALWPTGSTAEGSMWRGLADSLMRLVRPLPLLKTRSPIA---GGWVAPQKCVV 170
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A835YL62_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL62_9STRA) HSP 1 Score: 199 bits (505), Expect = 2.130e-55 Identity = 109/200 (54.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 16 RERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVSSAGEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGGGEAYEALWPTGPTA---------EGGMWRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 R+RW VCNQLGG RA AIA + + M+FVPWAGVAAR V AG + RG AYCFLPLPV TGLPVHVNGYFELSSNRRDIW+G DM GDG +RA WN ALVEE+AASCY R+LL + LG AY+ LWP P+A G+W G + LV+ P+L+T A G WVTP+ VV Sbjct: 326 RQRWLVCNQLGGKRANAIAADPRHELMRFVPWAGVAAR-----VKEDAGAAAVR-----RGRAYCFLPLPVFTGLPVHVNGYFELSSNRRDIWTGDDMAGDGAVRAQWNAALVEEIAASCYARLLLGVRTELGDRAAYDTLWPPLPSAGSVTSAVGAPAGVWAGCVAVFVALVRAQPVLQT----AHEKGHWVTPRDAVV 511
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A7S0CTG0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0CTG0_9EUKA) HSP 1 Score: 164 bits (415), Expect = 7.460e-47 Identity = 91/192 (47.40%), Postives = 116/192 (60.42%), Query Frame = 1 Query: 13 VRERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVSSAGEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGGGEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 V E++ + LGG RA A+A AK K +PWAG+AAR+ +G P G+A+CFLPLPV+TGLPVHVNGYFELS+NRRDIW GSDM GDGE+R+ WN+ L+E++ AS Y +L A LG + Y ALWP PT+E WR LA + R V P+L + G W P+ VV Sbjct: 49 VSEKYLLFEMLGGDRARAMAVENSAKGHKLLPWAGIAARIER--------KGPEPGPTDIEGSAFCFLPLPVRTGLPVHVNGYFELSANRRDIWWGSDMTGDGEMRSKWNRLLIEDVVASAYAHILYEASKILGYQKDYFALWPENPTSEA--WRVLAIEVYRKVLRFPVLYCQPVSR--EGYWCLPKDAVV 228
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: W7U1E4_9STRA (Ubiquitin-associated/translation elongation factor EF1B n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1E4_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.860e-45 Identity = 92/210 (43.81%), Postives = 123/210 (58.57%), Query Frame = 1 Query: 16 RERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARL--STTEVVSSAGEGSSSL-----------------PPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGGGEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 RE W VCN+LGG +A+ +A + + +K +PW GVA R+ T+E V+++ + + S P G AYCFLPLPV TGLPVHVNG+FELSSNRRDIW G DMVG+G+LRA WN+AL+ ++A CY+R L A G G Y++LWP G W + D+ V PLPLL T G W++P+ V+ Sbjct: 339 RETWIVCNRLGGGKASELAAASENAHLKLIPWGGVAGRVLVETSENVNTSDDTTRSTVGLTSNETEAQEFAALHETPMHGLAYCFLPLPVATGLPVHVNGFFELSSNRRDIWWGDDMVGEGQLRAEWNRALLCDVAVPCYSRFLSLAAERCGAGALYDSLWPV--KGNGPAWVAMIDAFFEAVSPLPLLHTPLGEQ-EKGVWISPRDAVL 545
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A7S1TYE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYE3_9STRA) HSP 1 Score: 160 bits (406), Expect = 4.190e-42 Identity = 99/219 (45.21%), Postives = 119/219 (54.34%), Query Frame = 1 Query: 13 VRERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARL--------STTEVVSSAGEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAK--------------AALGGGEA-----YEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 +RE+W VCNQ GG RA +A + MK VPWAGVAAR+ + V +G+ ++ P G AYCFLPLPV+TG PVHVNGYFELSSNRRDIW GSDM GDG RA WN+AL+ ++ A CY R+L+ A G GE YE L P T W L DS R + L +L T S G WVTP + VV Sbjct: 316 IREKWVVCNQFGGGRAAQMAADTSLEHMKLVPWAGVAARVGMHLPERGAAPWVAQWVPDGADAVAAP--GRAYCFLPLPVRTGFPVHVNGYFELSSNRRDIWHGSDMAGDGRTRAAWNEALLADIIAPCYARLLMLCAQRREFGNGYGSLGDGAGGSGEFRYGAFYEHLLPLERTRYTSPWLTLYDSFWRRAEGLEILYTPSGDD--RGRWVTPAQAVV 530
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A7S3QAL4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QAL4_9STRA) HSP 1 Score: 154 bits (390), Expect = 5.960e-40 Identity = 90/196 (45.92%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 4 VSEVRERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVSSAGEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAA-KAALGGGEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 VS +ERW VCNQLGG A+ +A + MK VPWAGVAARLS V EG G AYCFLPLPV+T LP+HVNGYFELSSNRRD+W G DM GDG+ RA WNK++V+++A Y R++ AA + L +E L+P + G W LA+ + ++ +P+L + A + WV P K ++ Sbjct: 314 VSFPKERWMVCNQLGGGNASIMARDKALDHMKLVPWAGVAARLSPDCNV----EG---------GNAYCFLPLPVRTKLPIHVNGYFELSSNRRDVWWGDDMAGDGKARAEWNKSIVQDIAGPSYVRLVEAAIRNNLVSSITFELLFPQRSLS--GPWLVLANRFLNGIRDVPVLHSACA---SPQNWVAPSKSLL 491
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A7S2UB77_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB77_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.770e-39 Identity = 83/176 (47.16%), Postives = 104/176 (59.09%), Query Frame = 1 Query: 16 RERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVSSAGEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALG-GGEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTRSA 540 +ERW VCNQLGG A+ +A MK +PWAGVAARLS +S GAAYCFLPLP +T LP HVNGYFELSSNRRD+W G DM GDG RA+WN +L+ +LA Y R++ + +A YE L+P G G WR L+D ++ LP+L S+ Sbjct: 330 KERWIVCNQLGGGNASRMAQDPGLSHMKLIPWAGVAARLSPLVDDTSF-----------EGAAYCFLPLPAKTKLPCHVNGYFELSSNRRDVWWGEDMAGDGRARADWNYSLLADLAMPSYCRLVAKSISAQHVSATTYEQLFPPGDDTVTGPWRVLSDGFFSGIRNLPVLYNSSS 494
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A7S3S4Y6_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3S4Y6_EMIHU) HSP 1 Score: 152 bits (383), Expect = 4.720e-39 Identity = 96/209 (45.93%), Postives = 123/209 (58.85%), Query Frame = 1 Query: 10 EVRER-WQVCNQL--GGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVSS---AGEGS----SSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGGGEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLR----------TRSAVAVAAGGWVTPQ 576 EVRE W VC+ L G R + + + +K +PW G AARLS ++ SS AGE + S+ P G AYCFLPLP TGLPVH NGYFELS+NRRDIW G DMVG G+LR+ WN AL++++ A CY ++LL A++ L G A+ ALWP+ AE W L ++ RLV PLLR RSA+ GG+ P Sbjct: 920 EVREEDWLVCSALARGARRICEMCLKPEGRRLKLMPWGGTAARLSVSKRPSSTADAGEAAVATESAGSTPIAGRAYCFLPLPSATGLPVHSNGYFELSANRRDIWHGDDMVGVGQLRSEWNIALLQDVLAPCYAQLLLYARSLLHG-PAFYALWPSSKPAE--PWGSLVAAMYRLVLDQPLLRCEADGGSWLSARSAIFADGGGFELPD 1125
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A5D6XM38_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XM38_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.520e-38 Identity = 83/195 (42.56%), Postives = 113/195 (57.95%), Query Frame = 1 Query: 19 ERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVSSAGEGSSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGG-GEAYEALWPTGPTAEGGMWRGLADSLMRLVKPLPLLRTR----SAVAVAAGGWVTPQKCVV 588 E++ VCNQLGG RA IA + + + +K +PWAG+A R+ P G A+CFLPLPV+ GLPVH+NGYFELSSNRRDIW G DM GDG+LR++WN++L+ + A Y LL A+A G E Y + +P+ G W + SL ++ P+ SA A A+ +V P+ CVV Sbjct: 1827 EKYLVCNQLGGGRAREIACAAENESLKLIPWAGIAGRIGVA---------------PAEGRAFCFLPLPVKVGLPVHINGYFELSSNRRDIWHGDDMTGDGKLRSDWNESLLRDAVAPAYLSFLLEARAVCGDDAEQYLSFFPS--QLPPGPWAAVVHSLFEAMETEPVFALSEVLASASASASRRYVAPKSCVV 2004
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Match: A0A383WI84_TETOB (RING-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WI84_TETOB) HSP 1 Score: 148 bits (374), Expect = 8.360e-38 Identity = 94/216 (43.52%), Postives = 122/216 (56.48%), Query Frame = 1 Query: 1 TVSEVRERWQVCNQLGGPRATAIA-GSEKAKFMKFVPWAGVAARLSTT------------EVVSSAGEG------SSSLPPPPRGAAYCFLPLPVQTGLPVHVNGYFELSSNRRDIWSGSDMVGDGELRANWNKALVEELAASCYTRVLLAAKAALGGGEAYEALWPTGPTAEGGM-WRGLADSLMRLVKPLPLLRTRSAVAVAAGGWVTPQKCVV 588 TV +RE W VCNQLGG A A+A + + + +K VPW GVAARLS++ +V +AG G S +L G A+CFLPLP TGLP+HVNGYFELSSNRRD+W GSDM G G LRA WN+AL+E A Y +L+ A LG +A+ L P G W A +L + P+L + AV G W+TP + ++ Sbjct: 218 TVEALREEWLVCNQLGGGEARALALKAWRDEKVKMVPWVGVAARLSSSSSSSVSKQSSDGQVGQAAGLGLGKTHASGAL----AGRAFCFLPLPASTGLPLHVNGYFELSSNRRDVWHGSDMAGAGRLRAQWNEALLESAVAPAYAALLVEAAQLLGPSQAFWQLLPAGQAGSIPQPWLRAAIALYAGLTQQPVLWS----AVGRGCWLTPAQALL 425 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1339.2610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1339.2610.1 >prot_L-elsbetiae_contig1339.2610.1 ID=prot_L-elsbetiae_contig1339.2610.1|Name=mRNA_L-elsbetiae_contig1339.2610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=196bp TVSEVRERWQVCNQLGGPRATAIAGSEKAKFMKFVPWAGVAARLSTTEVVback to top mRNA from alignment at L-elsbetiae_contig1339:2931..3812- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1339.2610.1 ID=mRNA_L-elsbetiae_contig1339.2610.1|Name=mRNA_L-elsbetiae_contig1339.2610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=882bp|location=Sequence derived from alignment at L-elsbetiae_contig1339:2931..3812- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1339:2931..3812- >mRNA_L-elsbetiae_contig1339.2610.1 ID=mRNA_L-elsbetiae_contig1339.2610.1|Name=mRNA_L-elsbetiae_contig1339.2610.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1176bp|location=Sequence derived from alignment at L-elsbetiae_contig1339:2931..3812- (Laminarionema elsbetiae ELsaHSoW15)back to top |