mRNA_L-elsbetiae_contig13367.2598.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: D7FUX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX5_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 5.070e-134 Identity = 206/215 (95.81%), Postives = 210/215 (97.67%), Query Frame = 1 Query: 1 AVVFLFRFGHDGSSMVVTMADAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEGGCLTPKLLGSFLGSFATVLCACTEEGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWYNT 645 AVVFLFRFGHDGSSMVVTMADAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEE PGKGVCVAEIVGGLSLLCAGNKSSKLAF+FHLFAVH +EGGCLTPKLLG+FLGSFATVLCACTEEGMEMAPEMLRSVIS ASETAVTSLLDTLDAA + EISFEDVGNWYNT Sbjct: 10 AVVFLFRFGHDGSSMVVTMADAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEEAPGKGVCVAEIVGGLSLLCAGNKSSKLAFAFHLFAVHTDEGGCLTPKLLGNFLGSFATVLCACTEEGMEMAPEMLRSVISTASETAVTSLLDTLDAATEAEISFEDVGNWYNT 224
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A6H5JYX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX4_9PHAE) HSP 1 Score: 232 bits (592), Expect = 7.050e-67 Identity = 115/125 (92.00%), Postives = 120/125 (96.00%), Query Frame = 1 Query: 271 QVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEGGCLTPKLLGSFLGSFATVLCACTEEGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWYNT 645 +VLSAVFYAFEE PGKGVCVAEIVGGLSLLCAGNKSSKLAF+FHLFAVH +EGGCLTPKLLG+FLGSFATVLCACTEEGMEMAPEMLRSVIS ASETAVTSLLDTLDAA + EISFEDVGNWYNT Sbjct: 89 EVLSAVFYAFEEAPGKGVCVAEIVGGLSLLCAGNKSSKLAFAFHLFAVHTDEGGCLTPKLLGNFLGSFATVLCACTEEGMEMAPEMLRSVISTASETAVTSLLDTLDAATEAEISFEDVGNWYNT 213
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A7S3XMH2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMH2_HETAK) HSP 1 Score: 106 bits (264), Expect = 8.150e-25 Identity = 69/201 (34.33%), Postives = 108/201 (53.73%), Query Frame = 1 Query: 40 SMVVTMADAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEG-GCLTPKLLGSFLGSFATVLCACTEEGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWY 639 ++ +T AD RV A++T L RDP + CG G + ++K FD +R L+PA+ + E+K S +LSA+FYA++ V V E +GG +LLCAGNKS KLA++F L +E+G G L+ + L FL +F +VL + + + M L +I + ++ + D A K +I FE++ WY Sbjct: 1 ALALTAADVARVQRLAARTGLRGRDPRAV-------CG-GLLAFAEEGLLSKKQFDRCVRRLIPAQSLTAEEKAEFSALLSALFYAYDRDGSSQVDVLEFMGGFALLCAGNKSGKLAYAFDLL---DEDGDGRLSRRGLWRFLRAFLSVLMSMSSKASSMEASELVDLIDNGAVWTAATIFEQCDLAEKNKIDFEELAAWY 190
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A7S4DHJ8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DHJ8_HETAK) HSP 1 Score: 102 bits (254), Expect = 1.380e-23 Identity = 56/152 (36.84%), Postives = 90/152 (59.21%), Query Frame = 1 Query: 193 KGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEGG--CLTPKLLGSFLGSFATVLCACTEEGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWYN 642 K +FDA++R LVP +++ E+DK LS LS +F++++ + +++ GLSLLCAG KS+KLAF+F L+A + G + P L ++L + T +CACT + +E+ + L ++ A+ AV + A I FE+ GNWYN Sbjct: 2 KAEFDAAVRALVPERFLTEDDKGLLSFALSNLFFSYDLAQADKAALRDLLCGLSLLCAGTKSAKLAFTFQLYARETDAEGEPVMGPGELLNYLRAVLTAVCACTAQMLELPADRLARLVFDAAAAAVEGIY----ARPSQRIGFEEFGNWYN 149
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A836CCD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCD1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 3.630e-17 Identity = 61/213 (28.64%), Postives = 106/213 (49.77%), Query Frame = 1 Query: 10 FLFRFGHDGSSMVVTMA--DAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEGGCLTPKLLGSFLGSFATVLCACTE-EGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWY 639 F F+ ++ +++ DA V++ +T L R +P+ + CGA ++ ++K FD ++ L + +++ R + +LS+++YAF+ V E+ G S+LC GNKSSKL +++ L A + G LT + L ++ SF TVL A + G A E+ R+V +A + D A A I+F D+ +WY Sbjct: 41 FYFQISESSAATPLSIEENDARAVMELVDRTGLARAEPQRI-------CGALLRAADAEGALSKRAFDQCMQVLALGAQLKAQERTRCAVLLSSIYYAFDRGNDGRVDALELATGFSILCGGNKSSKLVYAWDLLA---DADGALTRRGLWRYMRSFLTVLMALSSASGTLTAKELTRAVDDSAVWVSARVFADLRAADAATRITFTDLADWY 243
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A7S3UWA7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA7_HETAK) HSP 1 Score: 81.3 bits (199), Expect = 4.710e-15 Identity = 64/211 (30.33%), Postives = 97/211 (45.97%), Query Frame = 1 Query: 61 DAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLF--------AVHNEEGGCLTPKLLGSF-----LGSFATVLCACTEEGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPE---ISFEDVGNWYNT 645 ++ER+ A +RL RD E + + PE ++TK +++ +R+LVP + DK LS S +F+A + ++ GLSLLCAG+KS KLAF++ LF A +E G + LG + L +F LCA + E + V+ S L+ L +PE +SFED G WYN+ Sbjct: 5 ESERIRAVADISRLSHRDVESIYDAI-RLYSTDPE------YITKEEYNQCLRDLVPGSTLSTSDKHMLSTEFSKIFFALDPAEEDKALHRHLICGLSLLCAGSKSVKLAFTYRLFQQGDQGGAAAEGQEPGAGAARGLGEYWLADYLQAFLAALCALVVPPT-VPGERVADVVEEVSAEVAALCLEGL----QPEDGRVSFEDFGGWYNS 203
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A1V9YZG0_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZG0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.190e-11 Identity = 56/221 (25.34%), Postives = 101/221 (45.70%), Query Frame = 1 Query: 4 VVFLFRFGHDGSSMVVTMADAERVLDTASKTRLCRRDPELLLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEEDKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLF---AVHNEEGGCLTPK-LLGSFLGSFATVLCACTE----EGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWYN 642 + + F +GS + T D + L T+ + +L+ M + ++ +++ +F A IR+L+P + I E+D+Q S++L+ +F F+ V E+ GL++L G+KS KL+ F A NE P +L +L SF L A +E G++ V++ A+ ++ + + + +ISFE G WYN Sbjct: 49 LAYAFDMHEEGSLLHYTEKDIQTYLSMQEATQFSKLSVGAILDTIMSIARPKEGENNGTMVISRSNFYACIRKLIPRQNISEDDQQLASRLLARIFNVFDRKKNGKVQAIELACGLTILGQGSKSQKLSSVFEFLVKVANKNEPSETQLPHGMLFLYLRSFLLALMALSETRFRSGLDNLYVEADQVVNDATTKVLSEIKMDVSLRTRNKISFEQFGEWYN 269
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A7S2FUE5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FUE5_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 7.460e-11 Identity = 70/240 (29.17%), Postives = 103/240 (42.92%), Query Frame = 1 Query: 16 FRFGHDGS--SMVVTMADAERVLDTASKTRLCRRDPEL----LLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEE-------------DKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEGGC--------LTPKLLGSFLGSFATVLCACTEEGMEMAPEML-----RSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWY 639 F+F GS +V+T D ++ + T L P + LL+ + G + K DFD +IR LVP++ + E K LS VLS+ F+AFE PG GV AE+ G +LLCAGNKS KLA ++ L A GG LT + + FL ++ ++ + + P L R + A+ + T A I+F+D WY Sbjct: 2 FQFPSAGSPVQVVITQHDVTQLRQVVTITGLRHMHPVIVAKSLLKAALHTGGV----------LCKKDFDRTIRTLVPSEDMDNEYVSSAGAAAAASFTKSDLSVVLSSFFFAFETFPGMGVNAAELAVGFTLLCAGNKSEKLAVAWELIA--GSSGGAQSLENPARLTRRGVWRFLRAYLKMIIGVSGTIRGLTPSELACAADRGAVWMAALVFKDAKGRTRHQANHKSITFDDFAVWY 229
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A7S2FWU8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWU8_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.460e-10 Identity = 70/240 (29.17%), Postives = 103/240 (42.92%), Query Frame = 1 Query: 16 FRFGHDGS--SMVVTMADAERVLDTASKTRLCRRDPEL----LLEIFMENCGAGPESSPRSVWMTKGDFDASIRELVPAKWIPEE-------------DKQRLSQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLFAVHNEEGGC--------LTPKLLGSFLGSFATVLCACTEEGMEMAPEML-----RSVISAASETAVTSLLDTLDAAAKPEISFEDVGNWY 639 F+F GS +V+T D ++ + T L P + LL+ + G + K DFD +IR LVP++ + E K LS VLS+ F+AFE PG GV AE+ G +LLCAGNKS KLA ++ L A GG LT + + FL ++ ++ + + P L R + A+ + T A I+F+D WY Sbjct: 2 FQFPSAGSPVQVVITQHDVTQLRQVVTITGLRHMHPVIVAKSLLKAALHTGGV----------LCKKDFDRTIRTLVPSEDMDNEYVSSAGAAAAASFTKSDLSVVLSSFFFAFETFPGMGVNAAELAVGFTLLCAGNKSEKLAVAWELIA--GSSGGAQSLENPARLTRRGVWRFLRAYLKMIIGVSGTIRGLTPSELACAADRGAVWMAALVFKDAKGRTRHQANHKSITFDDFAVWY 229
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Match: A0A7S3QCH9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QCH9_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.960e-8 Identity = 48/166 (28.92%), Postives = 79/166 (47.59%), Query Frame = 1 Query: 193 KGDFDASIRELVPAKWIPEEDKQRL----SQVLSAVFYAFEETPGKGVCVAEIVGGLSLLCAGNKSSKLAFSFHLF-------AVHNEEGGCLTPKLLGS----FLGSFATVLCACTEEGMEMAPEMLRSVISAASETAVTSLLDTLDAAAKPE-ISFEDVGNWYN 642 + +F + + +PAK + L + L F +F+ V +++GGL+LLC GNKS KL+F+F LF A ++G T L G FL SF V+ +C ++ ME+ + + IS + + A K + I+F++ G+WYN Sbjct: 921 QNNFVVGVLKSIPAKCKRKRSTPPLPPTPQETLKNFFQSFDLGQVDRVAANQLMGGLTLLCGGNKSEKLSFAFGLFDMRVDDKAKKKKKGIDTTKSLCGKELFYFLRSFLIVMFSCCKQSMELRADSVSRYISDTANMVTDDAMKYQWRARKIDRINFDEFGDWYN 1086 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13367.2598.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13367.2598.1 >prot_L-elsbetiae_contig13367.2598.1 ID=prot_L-elsbetiae_contig13367.2598.1|Name=mRNA_L-elsbetiae_contig13367.2598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=215bp AVVFLFRFGHDGSSMVVTMADAERVLDTASKTRLCRRDPELLLEIFMENCback to top mRNA from alignment at L-elsbetiae_contig13367:1017..4223- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13367.2598.1 ID=mRNA_L-elsbetiae_contig13367.2598.1|Name=mRNA_L-elsbetiae_contig13367.2598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3207bp|location=Sequence derived from alignment at L-elsbetiae_contig13367:1017..4223- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13367:1017..4223- >mRNA_L-elsbetiae_contig13367.2598.1 ID=mRNA_L-elsbetiae_contig13367.2598.1|Name=mRNA_L-elsbetiae_contig13367.2598.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1290bp|location=Sequence derived from alignment at L-elsbetiae_contig13367:1017..4223- (Laminarionema elsbetiae ELsaHSoW15)back to top |