prot_L-elsbetiae_contig13366.2597.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig13366.2597.1
Unique Name	prot_L-elsbetiae_contig13366.2597.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	165

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig13366.2597.1 vs. uniprot
Match: A0A6H5L8W1_9PHAE (Cnd3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8W1_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.260e-24
Identity = 53/89 (59.55%), Postives = 73/89 (82.02%), Query Frame = 0

Query:    1 DGIEKDAKAIGSSVRLSQMLGVYFWSLPMASPRARGMLSDSVPHVLRLLRATAEHNAAAEKNNQDEENERMAVIDVPAVKAVRYVKQLL 89
            +G+E+DAKA+GSSVRLSQ+LGVYF SLP A PR R MLS+SV HV+ +LR  AE N AAEKNN+++ N+ +A+I+VP+   V++V++LL
Sbjct:  718 EGLEEDAKAVGSSVRLSQILGVYFRSLPSAGPRVRDMLSESVRHVMGVLRGIAELNVAAEKNNENDANKTVAMIEVPSQDVVKFVRELL 806

[Close]

BLAST of mRNA_L-elsbetiae_contig13366.2597.1 vs. uniprot
Match: D7FVL8_ECTSI (Cnd3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVL8_ECTSI)

HSP 1 Score: 100 bits (250), Expect = 1.170e-21
Identity = 51/89 (57.30%), Postives = 70/89 (78.65%), Query Frame = 0

Query:    1 DGIEKDAKAIGSSVRLSQMLGVYFWSLPMASPRARGMLSDSVPHVLRLLRATAEHNAAAEKNNQDEENERMAVIDVPAVKAVRYVKQLL 89
            + +E+DAKA+GSSVRLSQ+LGVYF SLP A PR R MLS+SV +V+ +LR  AE N AAEKNN+++ N+ +A I+VP    V++V++LL
Sbjct:  767 EDLEEDAKAVGSSVRLSQILGVYFRSLPSAGPRVRDMLSESVRYVMGVLRGIAELNVAAEKNNENDANKTVAKIEVPFQDVVKFVRELL 855

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig13366.2597.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig13366.2597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5L8W1_9PHAE	3.260e-24	59.55	Cnd3 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
D7FVL8_ECTSI	1.170e-21	57.30	Cnd3 domain-containing protein n=1 Tax=Ectocarpus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
None	No IPR available	COILS	Coil	Coil	coord: 116..136

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig13366	contig	L-elsbetiae_contig13366:1786..3183 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig13366.2597.1	mRNA_L-elsbetiae_contig13366.2597.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig13366 1785..3183 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig13366.2597.1 ID=prot_L-elsbetiae_contig13366.2597.1|Name=mRNA_L-elsbetiae_contig13366.2597.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=165bp
DGIEKDAKAIGSSVRLSQMLGVYFWSLPMASPRARGMLSDSVPHVLRLLR
ATAEHNAAAEKNNQDEENERMAVIDVPAVKAVRYVKQLLESGSCAAAEAA
AAPAPAAGESSSSTKEEAEEGENDEEGKELEEEEEDGQGNTPPSAAAAGE
SSSSTKKAGEEEDEE