mRNA_L-elsbetiae_contig1335.2591.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Match: A0A6H5KUZ7_9PHAE (Iwr1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUZ7_9PHAE) HSP 1 Score: 476 bits (1226), Expect = 1.110e-154 Identity = 374/719 (52.02%), Postives = 427/719 (59.39%), Query Frame = 3
Query: 198 MSQAPVQRKSRKALAAASLK---------PAPHLVVLRVKRKRGDDPVESLLVST-DEGRNSEEKGM-PDRKRRAPGVTGLIEETLADLSLTKTAEHRMLQQQH--------------EVQPPKRLFYKRVRTTEPDGSSDRKKE-----------RRPFAVDTSXXXXXXXXXXXXXGRLDALLSSRGVGPLGTLSLPPRPAAAL-DFMEVRRVKARAVGHVRTNNAKAEGSAELGACEQGTVSPSTG-ASSGTVSG---DFHVIDLQAVGRRDNDDMDISGMDEGGPGEAVKDGVGAEKRTAAPILSPGERQMDEAIFKAFQTGDLSSLRDLLASCSSSTPTGANYRRRLGDATTALMAAAFHGDLDTIRHLLSLGAKASLVDAGGRSAAVFAGMRGHRECFAELQRVADEEEKEQRARSTKXXXXXXXXXXXXGSAGDSGLDFVYDLYFFEPSAPTSRTEGAPASGGXXXXA---------AVPTASGRVGKMVSLSAPDAGGGAPPVVCLSGIGPVDENAVGT-TADVELEFEHDSDWSELGD-GDDGEDPDSNSEGYYGNDYPEDEGDEDDGACATPYVXXXXXXXXXXXXXXXXXXXXXXXXXXXSDIEPYSRRVVDMMPDDEDGLPGGGV--------------------------------GVAGMGG-------------------AQEADSTFHAGLGHASVFAWDPKR 2045
MSQAPV+RKSRKA+AAA K PAPHLVVLRVKRKRGD VESLLV+T DEG EE+ M P+RKRRA G I ET+A LSL KTAE + QQQH ++Q P+RL YKRVRTTEPDGS DR +E R+ A+D XXXXXXX GRLDALL S+G+ PP P AA+ D++EVRRVKARAVG V N+ S+ G +Q S+G A G + + HVIDL AVG+ D M + + G G A V KR AAPIL+P ERQMDEAIF AFQTGD+SSLRD+L + S +P G NYRRRLGDA+TALMAAAFHGDL T+R+LLS+GAKA+LVDA GRSAA+FAGMRGHRECFAELQRVAD+EE XXXXXXXXXXXX DFVYDLYF+EP A S T G PA G A AVPT+SG +G+ ++ A D GGAPPVV LSGIGPVDENAVGT A VELEFEHDSDWS LG+ GDDGEDPDSNSEGYYGNDYPEDEGDE+ GA +PYV SD EP+ RRVVD+ + GG GV G+ G A+S FHAGLG A VFAW PKR
Sbjct: 1 MSQAPVRRKSRKAVAAAMEKNAASQKKPAPAPHLVVLRVKRKRGDAAVESLLVATTDEGERIEEQEMMPNRKRRAAGTIS-IAETMAVLSLDKTAESQR-QQQHSPXXXXXXXXXPAVKMQSPRRLVYKRVRTTEPDGSRDRGEEGRSPVAGAPPARQKRALDGGEEGGXXXXXXX--GRLDALLRSKGLNTNSASCSPPPPTAAVFDYLEVRRVKARAVGIVPKNSPAPVDSSGRGGHKQHPSPQSSGLAPEGAATAAPANLHVIDLHAVGQADASAM-MDTLVMGDAGAAGGAHVATAKRAAAPILTPVERQMDEAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRYLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEE----XXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYFYEPPAQAS-TVGPPAVGAPAPGAGEGAGTPSGAVPTSSGELGEKTTIDAAD--GGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDDGEDPDSNSEGYYGNDYPEDEGDEE-GAGISPYVYAGGSGSSCASENGSSSSDGNAGFDSDSDNEPHYRRVVDVHEEFSRNFGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXARRSGSGVVGVDGFVKRMPLASGRGDGRDGATGTSAESEFHAGLGEAGVFAWGPKR 706
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Match: D7FQE4_ECTSI (Heat shock protein, mitochondrial protein import, putative mitochondrial translocase complex subunit, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQE4_ECTSI) HSP 1 Score: 385 bits (990), Expect = 3.690e-120 Identity = 278/456 (60.96%), Postives = 314/456 (68.86%), Query Frame = 3
Query: 480 VQPPKRLFYKRVRTTEPDGSSDRKKERRPFAVDT---------SXXXXXXXXXXXXXGRLDALLSSRGVGP-LGTLSLPPRPAAALDFMEVRRVKARAVGHVRTNNAKAEGSAELGACEQGTVSPSTG-ASSGTVSG---DFHVIDLQAVGRRDNDDM-DISGMDEGGPGEAVKDGVGAEKRTAAPILSPGERQMDEAIFKAFQTGDLSSLRDLLASCSSSTPTGANYRRRLGDATTALMAAAFHGDLDTIRHLLSLGAKASLVDAGGRSAAVFAGMRGHRECFAELQRVADEEEKEQRARSTKXXXXXXXXXXXXGSAGDSGLDFVYDLYFFEPSAPTSRTEGAPASGGXXXX---------AAVPTASGRVG-KMVSLSAPDAGGGAPPVVCLSGIGPVDENAVGT-TADVELEFEHDSDWSELGD-GDDGEDPDSNSEGYYGNDYPEDEGDED 1766
+ PP+RL YKRVRTTEPDGS DR E RP T XXXXXXGRLDALL S+G+ + S PP AA D++EVRRVKARAVG VR N+ S+ G EQ S+G AS G + + HVIDL AVG+ D M D S M G G A V KR AAPIL+P ERQMD+AIF AFQTGD+SSLRD+L + S +P G NYRRRLGDA+TALMAAAFHGDL T+RHLLS+GAKA+LVDA GRSAA+FAGMRGHRECFAELQRVAD+EE XXXXXXXXXXXX DFVYDLY++EP+A S T G PA G XX AAVPT+ G++G K +++A AGGGAPPVV LSGIGPVDENAVGT A VELEFEHDSDWS LG+ GDDGEDPDSNSEGYYGNDYPEDEGDE+
Sbjct: 1 MHPPRRLVYKRVRTTEPDGSRDRGDEGRPPVAGTPIARQKRALDGGEEGGGXXXXXXGRLDALLRSKGLNTNYASCSPPPPTAAVFDYLEVRRVKARAVGIVRKNSPAPADSSGRGGHEQDPSPQSSGLASDGAATAAPANLHVIDLHAVGQADASTMMDTSVM--GDAGAAGGAHVSTAKRAAAPILTPAERQMDKAIFTAFQTGDMSSLRDILTTSSYPSPAGVNYRRRLGDASTALMAAAFHGDLGTVRHLLSIGAKATLVDAHGRSAALFAGMRGHRECFAELQRVADQEE----XXXXXXXXXXXXXXXXXXXXXXXXXDFVYDLYYYEPAAQAS-TVGPPAVGAPAXXXXXXXXXPSAAVPTSCGKLGEKQTTINA--AGGGAPPVVRLSGIGPVDENAVGTMAAGVELEFEHDSDWSGLGEEGDDGEDPDSNSEGYYGNDYPEDEGDEE 447
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Match: A0A835YSD4_9STRA (Alkaline-phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 7.780e-15 Identity = 95/276 (34.42%), Postives = 134/276 (48.55%), Query Frame = 3
Query: 975 KRTAAPILSPGERQMDEAIFKAFQTGD-LSSLRDLLASCSSSTPTGANYRRRLGDATTALMAAAFHGDLDTIRHLLSLGAKASLVDAGGRSAAVFAGMRGHRECFAELQRVADEEEKEQRARSTKXXXXXXXXXXXXGSAGDSGLDFVYDLYFFEPSAPTSRTEGAPASGGXXXXAAVPTASGRVGKMVSLSAPDAGGGAPPVVCLSGIGPVDENAVGT------TAD--VELEFEHDSDWSELGDGDDGEDPDSNSEGYYGNDYPEDEGDEDDGA 1775
+R +L+P ER DEAI+ AF+ G + L ++L + G N+ R D TT LMAAA+ GD + LL+LGA +VD G +AA A M GH L + + + +RAR + G+ +D+VYD Y F+ T+ A +GG + A+ V + + +GG G D AV + TA+ VEL+FE+DSDWS+L + D ED SN+E +Y NDYPEDE E DGA
Sbjct: 875 ERRPMRVLTPMERLTDEAIWHAFRDGGGAARLLEVLQQGGA----GVNFTRTHADGTTPLMAAAYCGDGAVVTRLLALGAGPCVVDYSGNTAAKLASMNGHAAVARRL--LLAQAQWCERARGGED-----------ADLGEGDVDYVYDFYCFD------GTKAAFGAGGVGEKGVIWPANLPVVHIAGQFSEGSGGEG------GKRGGEDRGAVASDIYSFATAEGPVELQFEYDSDWSDLKEASDDED--SNAEDFYRNDYPEDE--EGDGA 1117
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Match: F0W0W7_9STRA (Angioassociated migratory cell protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0W7_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 7.880e-9 Identity = 98/307 (31.92%), Postives = 134/307 (43.65%), Query Frame = 3
Query: 846 TVSGDFHVIDLQAVGRRDNDDMDISGMDEGGPGEAVKDGVGAEKRTAAPILSPGERQMDEAIFKAFQTGDLSSLRDLL--ASCSSSTPTGANYRRRLGDATTALMAAAFHGDLDTIRHLLSL-GAKASLVDAGGRSAAVFAGMRGHRECFAELQRVADEEEKEQRARSTKXXXXXXXXXXXXGSAGDSGLDFVYDLYFFEPSAPTSRTEGAPASGGXXXXAAVPTASGRVGKMVSLSAPDAGGGAPPVVCLSGIGPVDENAVGTTADVELE-FEHDSDWSELGDGDDGEDPDSNSEGYYGNDYPEDE 1754
TVSG ++D NDD + + EA + +K A +L+P +R++DEAI+KAFQ D S+ +L S P N+ R L D +T LMAAAFHG +D I LL + G K L D G +A+ FA H L +A E + ++A FVYDLY E S PT+ T + A+ G +P V + V D G+ N D E+E F DSD S + +DGE +SN E YY NDYP++E
Sbjct: 617 TVSGKVCLVDFMVT----NDDCEST--------EASDITMNGQKLGAIRVLNPMQREVDEAIWKAFQQNDFSAFFQILHCEKAEQSMPKVLNFARPL-DGSTVLMAAAFHGRVDVIESLLQVTGIKVLLRDLEGSAASDFAARNKHLSVQEAL--IACETTEREKA-------------------------FVYDLYCVE-SVPTTSTTESLANDGLD----IPVV--HVNETVQQWLVD------------GL-----NNFQKAEDGEIEDFVFDSDNS-IDQDEDGESLNSNDEDYYLNDYPDEE 858
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Match: A0A024G006_9STRA (Iwr1 domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G006_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.660e-5 Identity = 51/150 (34.00%), Postives = 76/150 (50.67%), Query Frame = 3
Query: 846 TVSGDFHVIDLQAVGR----RDNDDMDISGMDEGGPGEAVKDGVGAEKRTAAPILSPGERQMDEAIFKAFQTGDLSSLRDLLASCSS--STPTGANYRRRLGDATTALMAAAFHGDLDTIRHLLSL-GAKASLVDAGGRSAAVFAGMRGH 1274
TV+G+ V+D R+ ++ ++G+ K A +L+P +R++DEAI+KAFQ+ D S+ L +S S N++R L D +TALMAAAFHG +D I LL + G K D G +A+ FA H
Sbjct: 593 TVTGEVCVVDFMVTNEDEQEREESNVTMNGL----------------KLGAIRVLNPAQREVDEAIWKAFQSNDFSAFFHFLHRANSEISMLKVLNFQRPL-DGSTALMAAAFHGRVDVIESLLGVTGIKVLQRDYEGSTASNFAARNKH 725
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Match: K8YQM2_NANGC (Yth domain containing 2 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQM2_NANGC) HSP 1 Score: 53.5 bits (127), Expect = 6.440e-5 Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 3
Query: 1014 QMDEAIFKAFQTGDLSSLRDLLASCSSSTPTGANYRRRLGDATTALMAAAFHGDLDTIRHLLSLGAKASLVDAGGRSAAVFAGMRGHRECFAEL 1295
+MD AI+ AF+ D+ D + + N+ R TALMAAAFHG L T++ LLSLGA L A G +A+ FA H+EC AEL
Sbjct: 13 RMDRAIWDAFK--DVKKGFDPILALVQHAGVSVNFSRP-AKGETALMAAAFHGKLATVKELLSLGADPCLKTADGHTASTFANKYNHKEC-AEL 102 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1335.2591.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1335.2591.1 >prot_L-elsbetiae_contig1335.2591.1 ID=prot_L-elsbetiae_contig1335.2591.1|Name=mRNA_L-elsbetiae_contig1335.2591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=617bp MSQAPVQRKSRKALAAASLKPAPHLVVLRVKRKRGDDPVESLLVSTDEGRback to top mRNA from alignment at L-elsbetiae_contig1335:13831..17154+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1335.2591.1 ID=mRNA_L-elsbetiae_contig1335.2591.1|Name=mRNA_L-elsbetiae_contig1335.2591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3324bp|location=Sequence derived from alignment at L-elsbetiae_contig1335:13831..17154+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1335:13831..17154+ >mRNA_L-elsbetiae_contig1335.2591.1 ID=mRNA_L-elsbetiae_contig1335.2591.1|Name=mRNA_L-elsbetiae_contig1335.2591.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3702bp|location=Sequence derived from alignment at L-elsbetiae_contig1335:13831..17154+ (Laminarionema elsbetiae ELsaHSoW15)back to top |