prot_L-elsbetiae_contig13343.2587.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig13343.2587.1
Unique Nameprot_L-elsbetiae_contig13343.2587.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length192
Homology
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BLAST of mRNA_L-elsbetiae_contig13343.2587.1 vs. uniprot
Match: A0A6H5L825_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L825_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 6.340e-84
Identity = 131/189 (69.31%), Postives = 142/189 (75.13%), Query Frame = 0 
Query:    4 HFVQGNTYYTDQELERAVEEYKTALKYDPLHADTMCNLGSALQDLGDYPLSRHYYSKXXXXXXXXXXXXXXXXXXXHDEDLETAMEHXQSAVEMDPSMADAWSNLGSAYHHEKELEDALGCYQEAIRLYETEEAYKGLPFTDDVLATLNYHTSVLLSKIPDGRCRPGGCTAQWMEHLRRCLRHDPEHAL 192
            HFVQ NTYYTDQELERAVEEYKTALK+DPLHADTMCNLGSALQDLGDYPLSRHYYSK                   HDED++TA+EHX                  SAYH E +LEDALGCYQEAIRLYETEEAY+GLPFTDDVLATLNYH S++L ++PDGRC  GGC +Q ME LRRCLRHDPEHAL
Sbjct:   36 HFVQANTYYTDQELERAVEEYKTALKFDPLHADTMCNLGSALQDLGDYPLSRHYYSKAVQANPYHAVAHFNLGLLLHDEDIDTAIEHXXXXXXXXXXXXXXXXXXXSAYHREDDLEDALGCYQEAIRLYETEEAYEGLPFTDDVLATLNYHVSIILGRLPDGRCLQGGCLSQRMEILRRCLRHDPEHAL 224
[Close]
BLAST of mRNA_L-elsbetiae_contig13343.2587.1 vs. uniprot
Match: A0A835YWA3_9STRA (S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWA3_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.590e-10
Identity = 62/228 (27.19%), Postives = 92/228 (40.35%), Query Frame = 0 
Query:    8 GNTYYTDQELERAVEEYKTALKYDPLHADTMCNLGSALQDLGDYPLSRHYYSKXXXXXXXXXXXXXXXXXXXHDEDLETAMEHXQSAVEMDPSMADAWSNL---------------------------------GSAYHHEKELEDALGCYQEAIRLYETE-EAYKGLPFTDD---------VLATLNYHTSVLLSKIPDGRCRPGGCTAQWMEHLRRCLRHDPEHAL 192
            GN  YT  +L  A+  YK AL++D  HAD++ NLGSALQDL          ++                       LE A++  ++AV  +P  A A  NL                                 G+AYH ++    A+  Y EA+ L+  + EA +  P   D          LA L+      + ++PD  C   GC A  +EHL   L++DP++ L
Sbjct:   16 GNDLYTAGDLPGAISVYKKALEHDETHADSLTNLGSALQDLAWQREEAGAQTESLRL-------------------LEEAVQAYRAAVAANPYHAMASYNLALLLHNDAPQEXXXXXXXXXXXXXXXXXXXXXLGAAYHAQQMYAQAVPHYLEAVELFTAQLEAERASPAAADDALIGQYTSYLAVLHARCGEAMVRMPDSECGDAGCVADAIEHLTMSLQYDPDNEL 224
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13343.2587.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L825_9PHAE6.340e-8469.31Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A835YWA3_9STRA3.590e-1027.19S-adenosyl-L-methionine-dependent methyltransferas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 115..135
NoneNo IPR availablePFAMPF13414TPR_11coord: 8..49
e-value: 1.1E-8
score: 34.6
NoneNo IPR availablePANTHERPTHR44366:SF1UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE 110 KDA SUBUNITcoord: 10..139
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1..34
e-value: 9.4
score: 15.2
coord: 69..101
e-value: 1.1
score: 18.3
coord: 102..135
e-value: 3.2E-6
score: 36.7
coord: 35..68
e-value: 0.0015
score: 27.8
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 6..34
score: 7.375
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 69..101
score: 8.349
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 102..135
score: 11.24
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 35..68
score: 9.765
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..80
e-value: 2.1E-18
score: 68.3
coord: 81..191
e-value: 5.2E-14
score: 54.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..191
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 102..133
e-value: 1.4E-8
score: 34.2
IPR037919UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunitPANTHERPTHR44366FAMILY NOT NAMEDcoord: 10..139
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..135
score: 32.369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13343contigL-elsbetiae_contig13343:581..4847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13343.2587.1mRNA_L-elsbetiae_contig13343.2587.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig13343 581..4847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig13343.2587.1 ID=prot_L-elsbetiae_contig13343.2587.1|Name=mRNA_L-elsbetiae_contig13343.2587.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=192bp
MRRHFVQGNTYYTDQELERAVEEYKTALKYDPLHADTMCNLGSALQDLGD
YPLSRHYYSKAVKANPYHAVAHFNLGLLLHDEDLETAMEHYQSAVEMDPS
MADAWSNLGSAYHHEKELEDALGCYQEAIRLYETEEAYKGLPFTDDVLAT
LNYHTSVLLSKIPDGRCRPGGCTAQWMEHLRRCLRHDPEHAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1
IPR037919OGT
IPR013026TPR-contain_dom