prot_L-elsbetiae_contig1332.2569.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1332.2569.1
Unique Nameprot_L-elsbetiae_contig1332.2569.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length651
Homology
BLAST of mRNA_L-elsbetiae_contig1332.2569.1 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 2.140e-77
Identity = 317/680 (46.62%), Postives = 385/680 (56.62%), Query Frame = 0
Query:    1 MAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDKVKRENVRVAERLRKKRAAMVASWCMMIAVLVTFFATYALVILPFEKRRGPFVSPSNLAFAQASEPTQPVPSQPQLDGSGGGA---EEVRRRSEQALREASQQARSKQQSANASHRVARAEKEXXXXXXXXXXXXXXXDRKTESGNGRDGHAPEIEAAPQQXXXXXXXXXXGVAQGEEEPELPAGSCSAPLPPSDGDAAAGAVGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXADGSCSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSAGCMPMFVYFGLSVSSPPPPVLPTAN--EHRRRAQVAYEERSRLETQRMESTNAGLRVVAEEKEKYRQRQAEEIMRKARXXXXXXXXXXXXXXXXXXXXXXAKEGHDEPEDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDAGDHQVGSQEVVGDEGIAVPPGEKGDDGGKEKGGAAPAAPGSXXXXSAGEGAGAASPSVDSQE---LGRRMAEEAKLAYEKNSRRVEENLATQNAGLRVVAEEREKYRQRQTQSIMEGARKXXXXXXXXXGSYPAAELSDGQQTPTDPET-----------------KAIGGSS----AVDSLSAS-------ATGLEAVRMRLRESLAPK--AGDGEGG 642
            MAGRLKESS+AINQTLRTQTQVLEDTGDAA QNV +VKREN RV+ERLRKKRAAM ASWCMMI V+ TFFATY LVI+PFEKRRGPFV+    AFAQA+EP + +PSQ +   +  GA   EE++RR+++A RE +++AR + +  NA+HRVAR EKE               DRK  +   ++     +EA               V Q   +    A  CSAP P SD D++ GA     XXXXXXXXX           XXXXXX D   +     XXXXXXXXX       XXXXXXXXXXX     +   +P     G   S+  P + P A+  EHRRRA  AYEERSR ET+  +STNAGLR+VAEEKEKYRQ+QAE++++ A   XXXXXXXXXXXXXXXXXXXX        +  +             XXXXXXXXXXXX            D +VG  +V    G A    E+ D G  +                    A A  PSVDSQE    GRR AEEA+LAYE+N+RR  ++LA+QNAG R+V+EE+EKYRQRQ + IMEGA +         G         G  +P D ET                   +GG      A  ++ +S       + GL+AVRMRLR+SL  K  AG GEGG
Sbjct:  209 MAGRLKESSVAINQTLRTQTQVLEDTGDAAIQNVGRVKRENARVSERLRKKRAAMFASWCMMITVVATFFATYFLVIMPFEKRRGPFVTARTSAFAQAAEPRERIPSQHEHVATAAGAATAEEIQRRAQEAYRETARRARGRHEGDNAAHRVAREEKEAFRHRQAERMMAANRDRK--AAMKKNSQQKTLEAGTDSVPQHRREEGAEVGQVNTQ----AVRCSAPPPASDEDSSGGAGAFGSXXXXXXXXXGDAKASAGSCTXXXXXXXDDDVTAAAAEXXXXXXXXXDSAEAAGXXXXXXXXXXXAAADTTDQTVP--AVGGTEASAAQPVLDPAASVEEHRRRANQAYEERSRRETENQDSTNAGLRLVAEEKEKYRQQQAEKMLQAASERXXXXXXXXXXXXXXXXXXXXXXXXXAALQPRALGATGGETARDDNXXXXXXXXXXXX------------DERVGGGQVDRAGGPAAEVAEEADKGSDD--------------------AAALPPSVDSQENHQAGRRRAEEARLAYEQNARRAADSLASQNAGQRLVSEEKEKYRQRQAKKIMEGAARRKQQRHEQGGETSDQLELAGDGSPPDSETGRETADGTIGNPAEDPASGVGGDGXXXGATPAVGSSERGSDQGSGGLDAVRMRLRKSLGSKRGAGGGEGG 848          
BLAST of mRNA_L-elsbetiae_contig1332.2569.1 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 258 bits (658), Expect = 7.940e-72
Identity = 313/695 (45.04%), Postives = 371/695 (53.38%), Query Frame = 0
Query:    1 MAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDKVKRENVRVAERLRKKRAAMVASWCMMIAVLVTFFATYALVILPFEKRRGPFVSPSNLAFAQASEPTQPVPSQPQLDGSGGGA---EEVRRRSEQALREASQQARSKQQSANASHRVARAEKEXXXXXXXXXXXXXXXDRKTESGNGRDGHAPEI--EAAPQQXXXXXXXXXXGVAQGEEEPELPAGSCSAPLPPSDGDAAAGAVGSCXXXXXXXXXXXXXXXXXXXXXXXXXXXADGSCSIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSAGCMPMFVYFGLSVSSPPPPVLPTANEHRRRAQVAYEERSRLETQRMESTNAGLRVVAEEKEKYRQRQAEEIMR------------KARXXXXXXXXXXXXXXXXXXXXXXA--KEGHDEPEDASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDAGDHQVGSQEVVGDEGIAVPPGEKGDDGGKEKGGAAPAAPGSXXXXSAGEGAGAASPSVDSQELGRRMAEEAKLAYEKNSRRVEENLATQNAGLRVVAEEREKYRQRQTQSIMEGARKXXXXXXXXXGSYPAAELSDGQQTPTDPET-----------------KAIGGSS-------AVDSL----SASATGLEAVRMRLRESLAPKAGDGEGGAREPGH 648
            MAGRLKESS+AINQTLRTQTQVLEDTGDAATQNVD+VKREN RV+ERLRKKRAAM ASWCMMI V+VTFFATY LVI+PFEKRRGPFV+    AFAQA+EP + +PS+     +  GA   EE++RR+++A RE +++AR + +  NA+HRVAR EKE               DRK            E   ++ PQ            V Q        AGSCSAP P S  D++ GAV                    XXXXXXXX   DG  +   XXXXXXXXXXX  XX                    AG        G + +SP  PVL  A EHRRRA  AYEERSR ET+ ++STNAGLR+VAEEKEK++Q+ AE++++            K R     XXXXXXXXXXXX     A    G +   D +XXXXXXXXXXXXXXXXXXXXXXXXXXXXX        D + G  +V    G A    E+ D GG +    A A P S               SVDSQE GRR AEEA+LAYE+N+RR  ++L                 RQRQ + IMEGA +         G        +G  +P D ET                   +GG         AV S     S  + GL+AVRMRLRESL  K G G G     GH
Sbjct:  203 MAGRLKESSVAINQTLRTQTQVLEDTGDAATQNVDRVKRENARVSERLRKKRAAMFASWCMMITVVVTFFATYFLVIVPFEKRRGPFVAARTSAFAQAAEPRERIPSEHDAAATAAGAATAEEIQRRAQEAYRETARRARGRHEGDNAAHRVAREEKEAFRHRQAERMMAANRDRKAAMKKNSQQETLEAGTDSVPQHRQEEGAEEGQVVTQ--------AGSCSAPPPASGEDSSGGAVA------------------LXXXXXXXXPDEDGDATAAAXXXXXXXXXXXAAXX-------------------GAGAA------GAAEASPAQPVLDPAEEHRRRANQAYEERSRRETENLKSTNAGLRLVAEEKEKHQQQXAEKMLQAASERKAMAAAGKVREEAQVXXXXXXXXXXXXALQARAPGSAGGETATDVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDN------DERSGGGQVDRAGGPAAEVAEEADKGGDD----AAALPDS---------------SVDSQEAGRRRAEEARLAYEQNARRAADSLXXXXXXXXXXXXXXXXXRQRQAKKIMEGAARRKQQRHQQGGETSDQLELEGDGSPPDSETGRENADGTIGNPAEEPSSGVGGDGXXXXATPAVGSSGRGSSQGSGGLDAVRMRLRESLGSKRGGGGGETSTNGH 821          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1332.2569.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6N4_9PHAE2.140e-7746.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHQ2_ECTSI7.940e-7245.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 521..541
NoneNo IPR availableCOILSCoilCoilcoord: 334..354
NoneNo IPR availableCOILSCoilCoilcoord: 152..172
NoneNo IPR availableCOILSCoilCoilcoord: 122..142
NoneNo IPR availablePANTHERPTHR13050:SF7VESICLE TRANSPORT PROTEIN USE1coord: 1..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 56..80
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 81..650
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
IPR019150Vesicle transport protein, Use1PFAMPF09753Use1coord: 1..71
e-value: 1.1E-9
score: 38.4
IPR019150Vesicle transport protein, Use1PANTHERPTHR13050USE1-LIKE PROTEINcoord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1332contigL-elsbetiae_contig1332:4356..10875 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1332.2569.1mRNA_L-elsbetiae_contig1332.2569.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1332 3867..11577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1332.2569.1 ID=prot_L-elsbetiae_contig1332.2569.1|Name=mRNA_L-elsbetiae_contig1332.2569.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=651bp
MAGRLKESSMAINQTLRTQTQVLEDTGDAATQNVDKVKRENVRVAERLRK
KRAAMVASWCMMIAVLVTFFATYALVILPFEKRRGPFVSPSNLAFAQASE
PTQPVPSQPQLDGSGGGAEEVRRRSEQALREASQQARSKQQSANASHRVA
RAEKEASRQRQAERRRANARDRKTESGNGRDGHAPEIEAAPQQQKQQQQQ
QQHGVAQGEEEPELPAGSCSAPLPPSDGDAAAGAVGSCSAPPADAAAAAA
SAAAASAAAASAAAAADGSCSIPPSDDDAALPAVGSCGAPPPSDDDDAAA
AAAAEASVSAGCMPMFVYFGLSVSSPPPPVLPTANEHRRRAQVAYEERSR
LETQRMESTNAGLRVVAEEKEKYRQRQAEEIMRKARERQQTTTTTTTTTE
GSKSTTERAKEGHDEPEDASRAGAVGGSSEATRAAATATVADEKPGGGGG
GGAGDAGDHQVGSQEVVGDEGIAVPPGEKGDDGGKEKGGAAPAAPGSAAA
GSAGEGAGAASPSVDSQELGRRMAEEAKLAYEKNSRRVEENLATQNAGLR
VVAEEREKYRQRQTQSIMEGARKRKQQQQQQQGSYPAAELSDGQQTPTDP
ETKAIGGSSAVDSLSASATGLEAVRMRLRESLAPKAGDGEGGAREPGHEE
*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019150Vesicle_transport_protein_Use1